Variovorax sp. 38R: IG196_09040
Help
Entry
IG196_09040 CDS
T10235
Name
(GenBank) formate dehydrogenase subunit alpha
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
vav Variovorax sp. 38R
Pathway
vav00630
Glyoxylate and dicarboxylate metabolism
vav00680
Methane metabolism
vav01100
Metabolic pathways
vav01120
Microbial metabolism in diverse environments
vav01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
vav00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
IG196_09040
09102 Energy metabolism
00680 Methane metabolism
IG196_09040
Enzymes [BR:
vav01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
IG196_09040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Molydop_binding
Molybdop_Fe4S4
Motif
Other DBs
NCBI-ProteinID:
QOF80502
LinkDB
All DBs
Position
complement(2026048..2029023)
Genome browser
AA seq
991 aa
AA seq
DB search
MLLTRKSPGTASQRASDTSPFVHSLRRGLANALPTMDRRAFLRRSGLGVGVGLAASQLTL
IQKAKAADGRPTAIGAGKIEVKRTVCSHCSVGCASDAVVENGVWVRQEPVFDSPINLGAH
CAKGAALREHGHGEYRLRYPMKLVNGKYERISWDTALDEITAKLKELTKASGPDAIYWIG
SSKHSNEQAYLLRKFVSFFGSNNCDHQARICHSTTVAGVANTWGYGAMTNSYNDMRNSKI
AMYIGSNAAEAHPVSMLHMLHAKENGCKMIVVDPRFTRTAAKAHEYVRIRSGSDIAFLFG
ILHHIFKNGWEDKRYINDRVYGMEEVRADVMSKWTPDKVEEACGVSEAQVLKVATMLHEH
RPGTVVWCMGQTQHSIGNAIVRASCILQLALGNVGKSGGGTNIFRGHDNVQGATDVGPNP
DSLPGYYGLVEGSWKHFAATWGVDFEWIKGRFASPAMMSKPGITVSRWIDGVLEKNELID
QDSNLRGVFYWGHAPNSQTRGLEMKRAMDKLDLLVVVDPYPSATAAMAAMPGRPEDANAN
RAVYLLPACTQFETSGSVTASNRSVQWREKVIEPLWESRTDHMIMQQFADRLGFGKELSK
NYKMQKVKGMDEPVPEDILREINKSCWAVGYSGQSPERLQAHMRNMAAFDVRTLKAKGSV
KDKVNGYDISGDYFGLPWPCYGTPELKHPGSPNLYDPSKHVMDGGGNFRANFGVERNGKN
LLAEDGSYSKGADITTGYPELDHLLLKKLGWWDELTEAEKPKAEGKNWKTDSSGGMIRVF
MKNHGCHPFGNAKARAVVWNFPDAIPQHREPLYGTRPDLVAKYPTHDDKMAFWRLPTLYK
TVQQKNIADKIAEKFPYIMTSGRLVEYEGGGEETRSNPWLAELQQEMFIEINPKVAAEKN
IRNGERAWVHTPTGAKLNVQALVTERVGPDTVFMPFHFSGRWQGEDLLAYYPKGAAPIVR
GEAINTGTTYGYDSVTMMQETKTTVCNIEKA
NT seq
2976 nt
NT seq
+upstream
nt +downstream
nt
gtgcttctgaccagaaaatccccaggcaccgcgagccagcgggcctccgacacctcgcct
ttcgttcacagcttgcggcgcggcctcgcgaacgccttgccgacgatggaccgccgcgcc
ttcctgcggcgctccggcctcggcgtcggggtgggcctggcggccagccagctcacgctg
atccagaaggccaaggccgccgacggccggcccaccgccatcggcgccggcaagatcgaa
gtgaagcgcaccgtgtgctcgcactgctcggtcggctgcgcgtccgacgcggtggtcgag
aacggcgtgtgggttcggcaggagcccgtgttcgactcgcccatcaacctgggcgcccac
tgcgccaagggcgccgcgctgcgcgagcacggccatggcgaataccgcctgcgctacccg
atgaagctcgtcaacggcaagtacgagcgcatcagctgggacaccgccctcgacgagatc
accgccaagctcaaggaactcaccaaggccagcgggcccgacgcgatctactggatcggc
tcgagcaagcacagcaacgagcaggcctacctgctgcgcaaattcgtgagcttcttcggc
agcaacaactgcgaccaccaggcgcgcatctgccactcgaccacggtcgcgggcgtggcg
aacacatggggctacggcgccatgaccaattcgtacaacgacatgcgcaattcgaagatt
gcgatgtacatcggctcgaacgcggccgaggcgcacccggtgagcatgctgcacatgctg
cacgccaaggaaaacggctgcaagatgatcgtggtcgacccacgcttcacgcgcaccgcg
gccaaggcccacgagtacgtgcgcatccgctcgggctcggacatcgcgttcctgttcggc
atcctgcaccacatcttcaagaacggctgggaagacaagcgctacatcaacgaccgcgtc
tacggcatggaagaagtgcgtgccgacgtcatgagcaagtggacgcccgacaaggtcgaa
gaggcctgcggcgtgagcgaagcgcaggtgctgaaggtcgcgacgatgctgcacgagcac
cgccccggcaccgtggtctggtgcatgggccagacgcagcacagcatcggcaacgcgatc
gtgcgggcctcgtgcatcctgcagctggcgctgggcaacgtgggcaagtcgggcggcggc
accaacatcttccgcggccacgacaacgtgcagggcgccaccgacgtcggccccaacccc
gattcactgccgggctactacggcctggtcgaaggctcgtggaagcacttcgccgccacc
tggggcgtcgacttcgaatggatcaagggccgctttgcatcgcccgcgatgatgagcaag
cccggcatcacggtgtcgcgctggatcgacggcgtgctcgagaagaacgagctcatcgac
caggactcgaacctgcgcggcgtcttctactggggccatgcgcccaactcgcagacgcgc
ggcctcgagatgaagcgggccatggacaagctcgacctgctcgtcgtggtcgacccgtac
ccgtcggccacggccgccatggccgcaatgccgggccggcccgaagacgccaacgcgaat
cgcgcggtgtacctgctgcccgcgtgcacgcagttcgaaaccagcggatcggtcacggca
tcgaaccggtcggtccaatggcgcgagaaggtcatcgagccgctgtgggaaagccgcacc
gaccacatgatcatgcagcagttcgccgaccgtctgggcttcggcaaggagctcagcaag
aactacaagatgcagaaggtcaagggcatggacgagcccgtgccggaagacatcctgcga
gaaatcaacaagtcgtgctgggccgtcggctactcgggccagagccccgagcggctgcag
gcgcacatgcgcaacatggccgccttcgacgtgcgcacgctcaaggccaagggctccgtc
aaggacaaggtcaacggctacgacatctcgggcgattacttcggactgccctggccctgc
tacggaacgcccgaactcaagcaccccggctcgccgaacctgtacgacccgtccaagcac
gtgatggacggcggcggcaacttccgcgcgaacttcggcgtggagcgcaacggcaagaac
ctgctggccgaagacggttcctactcgaagggcgccgacatcaccaccggctaccccgaa
ctcgaccacctgctgctcaagaagctcggctggtgggacgaactcaccgaggccgagaag
cccaaggccgaaggcaagaactggaagaccgacagctcgggcggcatgatccgcgtgttc
atgaagaaccacggctgccaccccttcggcaatgccaaggcgcgtgcggtggtgtggaac
tttcccgatgcgattccgcagcaccgcgagccgctctacggcacgcgccccgacctcgtc
gccaagtacccgacccacgacgacaagatggccttctggcgcctgcccacgctctacaag
accgtgcagcagaagaacatcgcagacaagatcgccgaaaaattcccgtacatcatgacc
tcgggccggctcgtggaatacgaaggcggcggcgaggaaacgcgctccaacccctggctg
gccgagctgcagcaagagatgttcatcgagatcaacccgaaggtggcggccgagaagaac
atccgcaacggcgagcgcgcctgggtgcacacgcccaccggcgccaagctcaatgtgcag
gcgctcgtcaccgagcgcgtcgggcccgacacggtgttcatgcccttccacttctcgggc
cgctggcagggcgaagacctgctggcctactacccgaagggcgcggcgcccatcgtgcgc
ggcgaggccatcaacaccggcaccacctacggctacgacagcgtcaccatgatgcaagag
accaagaccacggtctgcaacatcgagaaagcataa
DBGET
integrated database retrieval system
