Variovorax sp. 38R: IG196_11305
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Entry
IG196_11305 CDS
T10235
Name
(GenBank) sugar phosphate isomerase/epimerase and 4-hydroxyphenylpyruvate domain-containing protein
KO
K26400
3-dehydroshikimate dehydratase [EC:
4.2.1.118
]
Organism
vav Variovorax sp. 38R
Pathway
vav00400
Phenylalanine, tyrosine and tryptophan biosynthesis
vav01100
Metabolic pathways
vav01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
vav00001
]
09100 Metabolism
09105 Amino acid metabolism
00400 Phenylalanine, tyrosine and tryptophan biosynthesis
IG196_11305
Enzymes [BR:
vav01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.118 3-dehydroshikimate dehydratase
IG196_11305
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Motif
Pfam:
AP_endonuc_2
Glyoxalase_5
Glyoxalase
Glyoxalase_4
Glyoxalase_3
Motif
Other DBs
NCBI-ProteinID:
QOF80922
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Position
2498701..2500623
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AA seq
640 aa
AA seq
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MHRAIATVSLSGTLRQKLEAIAAAGFDGIELFEADFVNFRGTAAELRRIASDLGLSIDLY
QPFRDFEGMPQVQFQRSLERAERKFDLMEAMGAPLVLCCSNTSPLSVNDPARAAAQLHEL
AERAARRNLRVGFEALAWGRHTSRYAQAWDIVQRADHPHLGLILDSFHTLSLKDDPAGIA
AIPGEKIFFVQMADAPLLSMDVLQWARHHRSFPGQGDFDVTGFFEQVLRAGYTGPLSLEI
FNDIFRETPNRRTAVDAMRSLLYLESETRERLAASDAPVQPQRVELFNPPPAPVLSGLSF
IEFAADEASAVTLGSLLGQLGCRRVGRHRSKAVTLYRQGGIHFIVNAQPDSFARRRFEAH
GTSVCALGVRCADPLAAVGRATSMRSLRHDSPVGPNELRVPAIVAPGGNLIHFVPEALGA
NGLYETDFILEDAGPDDRDAGLTRIDHVALGLALDQLDTWVLFTRAVLGLEPGESLELAD
PFGLIRSRGVANADRSLRLVLNVSLSQRTRTARTLSVTGGGAVHHIALDCDDIFDTVARL
RANGTRFVPISDNYYDDLATRIDVAPELLARMRDAGVLFDRSAAGDYLHIYTESFEGGLF
FEVAQRMGGYDAYGALNAPARMASQAQQPQQPQQPQQQQD
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atgcaccgcgccattgccaccgtctcgctcagcggcaccctccgtcagaagctcgaagcc
attgcggcggcgggcttcgacggcatcgagctgttcgaagccgatttcgtcaacttccgc
ggcaccgccgccgagctgcgccgcatcgcgtccgacctgggcctgtcgatcgacctgtac
cagccgttccgcgatttcgaaggcatgccgcaagtgcagttccagcgcagcctggagcgc
gccgaacgcaagttcgacctcatggaagccatgggcgcgccgctggtgctgtgctgctcc
aacacctcgccgctgtcggtgaacgatccggcccgcgccgctgcccagctgcacgagctg
gccgagcgcgccgcgcgccgcaacctgcgcgtgggcttcgaggcgctggcctggggccgc
cacacctcgcgctacgcccaggcctgggacatcgtgcagcgcgccgaccacccgcacctc
gggctgatcctggacagcttccacacgctgtcgctgaaggacgatccggcgggcatcgcc
gccattccgggcgagaagatcttcttcgtgcagatggccgatgcgccgctgttgtcgatg
gacgtgctgcagtgggcgcgccaccaccgctcgtttccggggcagggcgacttcgacgtg
accggcttcttcgagcaggtgctgcgcgcgggctacaccgggccgctgtcgctcgagatc
ttcaacgacatcttccgcgaaacgccgaaccgccgcaccgcggtcgatgcgatgcgctcg
ctgctgtacctcgaaagcgaaacgcgcgagcggctggccgccagcgatgcacccgtgcag
ccgcagcgcgtggagctgttcaacccgccacccgcgccggtgctttcgggcctgtcgttc
atcgagttcgcggccgacgaggcctcggccgtcacgctcggttcgctgctcgggcaactg
gggtgccgccgtgtcgggcgccaccgttccaaggccgtcacgctgtaccgccagggcggc
atccatttcatcgtcaacgcgcagcccgattcgtttgcgcgccgccgcttcgaggcgcat
ggcacctcggtgtgcgcgctgggcgtgcgctgcgccgacccgctcgcggccgtgggccgc
gcgacctccatgcgctcgctgcgccacgacagcccggtcggcccgaacgaactgcgcgtg
ccggccatcgtggcgccgggcggcaacctgatccatttcgtgcccgaggcgctgggcgcc
aacgggctgtacgagaccgacttcatcctcgaagacgcagggcccgacgaccgcgatgcc
ggcctcacgcgcatcgaccacgtcgcgctgggcctggcgctcgaccagctcgacacctgg
gtgctgttcacgcgcgccgtgctcggcctggagcccggcgagagcctggagctggccgac
cccttcggcttgattcgcagccgcggcgtggccaatgccgaccgcagcctgcgcctggtg
ctgaacgtgtcgctgagccagcgcacgcgcaccgcgcgcacgctgagcgtgaccggcggc
ggcgcggtgcaccacatcgcactcgactgcgacgacatcttcgacaccgtggcccggctg
cgcgccaacggcacgcgcttcgtgccgatctcggacaactactacgacgacctggccacg
cgcatcgacgtggcgcccgagctgctggcgcgcatgcgcgacgcgggcgtgctgttcgac
cgctcggcggccggcgactacctgcacatctacaccgagagtttcgaaggcggcctgttc
ttcgaggtcgcgcagcgcatgggcggctacgacgcctacggcgcgctcaacgcacccgcg
cgcatggcgtcgcaagcacagcagccacagcagccgcagcagccgcagcaacaacaagac
tga
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