Variovorax sp. 38R: IG196_30030
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Entry
IG196_30030 CDS
T10235
Name
(GenBank) TonB-dependent siderophore receptor
KO
K16091
Fe(3+) dicitrate transport protein
Organism
vav Variovorax sp. 38R
Brite
KEGG Orthology (KO) [BR:
vav00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vav02000
]
IG196_30030
Transporters [BR:
vav02000
]
Other transporters
Pores ion channels [TC:
1
]
IG196_30030
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
QOF78473
LinkDB
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Position
6467238..6469403
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AA seq
721 aa
AA seq
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MFKKTKTAAIVMALFPISFQSWAADAEPGVDPSKSLEAITVTGDWLGSPSETKVLEHAGA
RSIVERRQIQESGAASVRDVLRQVPGVQVQESSGTGGSDISLNVGVRGLTSRLSFRSTVL
IDGVPVAYAPYGQPQLSLAPVALGSLEAVDVVRGAGSVRYGPQNVGGIINFVTRSIPKQF
AGEVGVGVESASHGGGTKSTPTLFIGGTNENGLGLALLYSGTHGNGFRQSNDKTRIDDLM
LKGAYRLSKTDDIAVTLHRFEGSARMPGGLTTAQFAANPFQSDRPFDEFSGSRTDGSVKY
THNDGVNKFEMLTYYTDSFRGSHLEQEGSGNSAGQRRLTAAPRNYKTYAFEPRYSRLIDS
GSVVQEISVGARYLKEEASEVATRSSYYRPRPGFDAYSLAQPTYQFSKGGTTAHAFYIDD
RIDFGNWTVTPGVRYESIRSHNDVFNMASGRITSAIYPKIDSNEVLPTLSVLYRMSERWS
VFANAGVSFGPQQYAQLAQSTSGLHPEKAKTYEIGTHYKGEAWSGELTLFNINFDKELQL
ARSITGEVSQWTDLGATRHRGLESALRYDLGSLSGALKGLSVSGTYTYTQATSKAGAFAG
RDLPFYSRQVATLGARYERGPWTVNADVYAQSKQRSPGAPDDGARYITLEDSTGRLGDIP
GYATMNLRAAYDFGPSLSHLKLAVGVKNLFDRRYYNRSVDNNGGKYVGQPRTLYMQASLA
F
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atgttcaagaaaacaaaaaccgccgccatcgtgatggcgctctttcccatcagcttccag
agctgggcggccgacgccgagcccggggtcgatccatcgaagtcgctcgaggccatcacc
gtcaccggtgactggctgggctcgcccagcgagaccaaggtgctcgagcacgccggcgcg
cgcagcatcgtcgaacgcaggcagatccaggagagcggcgccgccagcgtgcgcgacgtg
ctgcgccaggtgcccggcgtgcaggtgcaggaaagcagcggcacgggcggcagcgacatc
tcgctcaacgtcggcgtgcgcggcctgacctcgcggctgtcgttccgctccacggtgctg
atcgacggcgtgcccgtggcctatgcgccctatggccagccgcagctgtcgctggcgccg
gtggcgctgggcagcctcgaggcggtcgacgtggtgcgcggcgcgggctcggtgcgctac
ggcccgcagaacgtgggcggcatcatcaacttcgtgacgcgttcgattccgaagcagttc
gcgggcgaagtgggcgtgggcgtcgaaagcgccagccacggcggcggcaccaagtccacg
cccacgctgttcatcggcggcaccaacgagaatggcctgggcctggcgctgctgtattcg
ggcacgcacggcaacggctttcgccagagcaacgacaagacgcgcatcgacgacctgatg
ctcaagggcgcctaccgcctctcgaagaccgacgacatcgcggtgacgctgcaccgcttc
gaaggcagcgcccgcatgccgggcgggctgaccaccgcgcagttcgcggccaacccgttc
cagtcggaccgccccttcgacgagttcagcggcagccgcaccgacggctcggtcaagtac
acgcacaacgacggcgtgaacaagttcgagatgctgacctactacacggactcgttccgc
ggcagccacctcgagcaggaaggctcgggcaacagcgccggccagcgccgcctcaccgcc
gccccgcgcaattacaagacctacgccttcgagccgcgctactcgcgcctcatcgattcc
ggcagcgtggtgcaagagatcagcgtcggcgcgcgctacctcaaggaagaggcctccgag
gtggccacgcgcagcagctactaccggccgcgcccgggcttcgatgcctactcgctggcc
cagcccacgtaccagttcagcaagggcggcacgacggcgcacgcgttctacatcgacgac
cgcatcgacttcggcaactggaccgtcacacccggcgtgcgctacgaatcgatccgctcg
cacaacgatgtgttcaacatggcgagcggccggatcaccagcgcgatctacccgaagatc
gactcgaacgaggtgctgcccacgctgtcggtgctctaccgcatgagcgagcgctggtcg
gtgttcgcgaatgcgggcgtgtcgttcgggccgcagcagtacgcgcagctcgcgcagtcg
accagcggcctgcatcccgaaaaggccaagacctacgaaatcggcacgcactacaagggc
gaggcctggagcggcgagctgacgctgttcaacatcaacttcgacaaggaactgcagctg
gcgcgctccatcaccggcgaggtcagccaatggaccgacctgggcgccacgcgccaccgc
gggctggagtcggcgctgcgctacgacctgggcagcctgagtggcgcgctcaaggggctg
tcggtgtcgggcacctacacgtacacgcaggcgacctcgaaggccggcgccttcgccggc
cgcgacctgccgttctactcgcgccaggtggccacgctgggcgcgcgctacgagcgcggg
ccgtggacggtcaacgccgacgtgtacgcgcagtcgaagcagcgctcgccgggcgcaccc
gacgacggcgcgaggtacatcacgctggaagattcgaccggccggctcggcgacatcccc
ggctacgccacgatgaacctgcgcgccgcctacgacttcggcccctcgctgagccacctg
aagctggccgtgggcgtgaagaacctgttcgaccgccgctactacaaccgctcggtcgac
aacaacggcggcaagtacgtgggccagccgcgcacgctgtacatgcaggcgtcgctggcg
ttctga
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