KEGG   Vibrio campbellii ATCC BAA-1116: M892_13685
Entry
M892_13685        CDS       T02837                                 
Name
(GenBank) signal recognition particle protein Srp54
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
vca  Vibrio campbellii ATCC BAA-1116
Pathway
vca02024  Quorum sensing
vca03060  Protein export
vca03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:vca00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    M892_13685
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    M892_13685
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    M892_13685
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:vca02044]
    M892_13685
Enzymes [BR:vca01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     M892_13685
Secretion system [BR:vca02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   M892_13685
  Eukaryotic Sec-SRP protein
   M892_13685
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N CbiA AAA_22 Zeta_toxin cobW T2SSE KTI12 AAA_30 Mg_chelatase AAA_31 AAA_33 KAP_NTPase Rad17 AAA_19 AAA_14 ATP_bind_1 APS_kinase ABC_tran AAA_16 Thymidylate_kin
Other DBs
NCBI-ProteinID: AGU95381
LinkDB
Position
I:2943752..2945134
AA seq 460 aa
MFENLTDRLSKTLKNISGKGRLTEDNIKETLREVRMALLEADVALPVVREFVNRVKEKAV
GVEVSKSLTPGQEFIKIVQAELEAVMGESNEALNLAAQPPAVLLMAGLQGAGKTTSVGKL
SKLLKERDKKKVLVVSADVYRPAAIKQLETLASDIGVDFFPSSPDQKPLDIANAAIDHAK
KKFYDVLIVDTAGRLAIDEEMMGEIKDLHSAINPVETLFVVDAMTGQDAANTAKAFGDAL
PLTGVILTKVDGDARGGAALSVRHITGKPIKFLGVGEKTDALEPFHPDRVASRILGMGDV
LSLIEDLQRNVDQEKAEKLAKKFKEKKGFDLEDFREQLGQMQNMGGMMGMLDKLPGMSQL
PSDVKDKVDDKMFKQMEAIISSMTMKERQRPEIIKGSRKKRIAAGSGVQVQDVNRLLKQF
TQMQKMMKKMQKGGMKGMMRNMQGMMGGMGGGGGFNPFGR
NT seq 1383 nt   +upstreamnt  +downstreamnt
atgtttgagaatttaacggatcgattatccaaaacgctgaagaatatcagtggcaaaggt
cgtctgaccgaagacaacattaaagaaaccctacgtgaagtacgcatggcactattggaa
gcggacgttgcgcttcctgttgtacgtgaatttgtaaaccgcgttaaagaaaaagcggtt
ggcgtagaagtttctaaatccctaacgccgggccaagaattcatcaagatcgttcaagct
gagcttgaagcggtaatgggtgagtctaacgaagcgcttaacctagcagcacagccgcca
gcagtacttttgatggcaggtctacaaggtgcgggtaaaaccacatcggtaggtaagcta
tctaagcttctgaaagagcgcgataagaagaaagtcttggttgtgtctgccgacgtttac
cgtcctgcggcgatcaaacagctagaaaccctagcatcagacatcggtgtcgacttcttc
ccatcttcaccagatcaaaagccacttgatattgctaacgcagcaattgaccacgcgaag
aagaaattctacgacgtattgattgtcgataccgcgggtcgtttggctatcgatgaagaa
atgatgggtgagattaaagatcttcactcagcgattaacccggttgagacgctgttcgtt
gttgatgcaatgacaggtcaagatgcggcgaacacagcaaaagcattcggtgatgcgcta
ccgctaactggcgtgattctgactaaagtagatggtgacgcacgtggtggtgcggcgcta
tcggttcgtcatatcacgggtaagccaatcaaattcctaggtgtgggtgaaaagaccgac
gcactagaaccgttccaccctgatcgtgttgcatcgcgtattctaggtatgggtgacgta
ctgtcactgattgaagacctacaacgcaatgttgaccaagaaaaagcagagaaactagcg
aagaagttcaaagagaagaaaggttttgaccttgaagacttccgtgaacagctaggtcag
atgcaaaacatgggtggcatgatgggcatgctagataagctaccaggtatgtctcagcta
ccatcagacgtaaaagacaaagtcgatgacaagatgttcaagcaaatggaagcgatcatc
agctcaatgacaatgaaagaacgtcaacgtcctgaaatcatcaaaggttcgcgtaaaaag
cgtatcgctgcaggttcaggtgtacaggttcaagacgttaaccgtctactgaagcagttc
acccaaatgcagaagatgatgaagaaaatgcagaagggcggcatgaaaggcatgatgcgt
aacatgcaaggcatgatgggcggtatgggtggcggcggtggcttcaacccatttggtcgt
taa

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