Venturia canescens: 122405820 Help Entry 122405820         CDS       T09386                                  Name (RefSeq) THO complex subunit 2 isoform X1   KO K12879   THO complex subunit 2 Organism vcan  Venturia canescens Pathway vcan03013   Nucleocytoplasmic transport vcan03040   Spliceosome Brite KEGG Orthology (KO) [BR:vcan00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     122405820   09122 Translation    03013 Nucleocytoplasmic transport     122405820  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:vcan03019]     122405820    03041 Spliceosome [BR:vcan03041]     122405820 Messenger RNA biogenesis [BR:vcan03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     TREX complex      122405820 Spliceosome [BR:vcan03041]  Complex C   Other components    EJC/TREX     122405820  Other splicing related proteins   Spliceosome associated proteins (SAPs)    TREX complex     122405820 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Tho2 THOC2_N Thoc2 Motif Other DBs NCBI-GeneID:  122405820 NCBI-ProteinID:  XP_043266758 LinkDB All DBs Position 2:11611516..11622765 Genome browser AA seq 1427 aa AA seqDB search MAGKSWNSDMWKTWDKHGKNDFLKIIKHKYKEGDAPEWKRGLYELISNGVRGSIKKDSVV TTLGELVSIDAAIPSAIVDIFTLIDAEAQNDERNNFYYIVKECEKFLTDRILTERLEIET LQDVGTLKNRNFQTKFIKVKTKLYYKQRKFNLFREESEGYSKLIVELNQDRPAEGVTGIL EIVKSLIGYFNLDPNRVLDILLETFENRPQDDALFIPLIRSYMSDQQVLCEVLGFKYRST ADSTPFSLQKVTALMLQHGVIELDDILPWLVPDDKSIIKDHAQAMKQAKEYVRKMSVIST KDKEEVPEEKENVQDKYGSNQKFGLCEALLEIGAWQVAQNLFNRLPDHCFTDQRPIALAL CKMIQSLIEPVYRKHCIISPKLPGRKVPPLESTLAPKPMENLQSIHEQLLPMLMILGPNL HHDPILMYKIMRLCHAAIKQCPIDASKQLVDKTNTLYYDVLTILDGALLPSLSFMDCNCC VAEEMWNILKHYPYQNRYALYARWKNDTPQQHAALLRKRADAEKKIKSIMKRVSKETIKP VGRSIGKLTHSSPGVLFDYVLIQIQLYDNLIGPVVDSLKYLTNISYDVLGYCLVEALAGA DRDRFKHDGTSISLWLQSLASFCGAIFKKYNIELTGLLQYVADQLKAQKSLDLLILKEIV QKMAGIEAAEEMTADQLDAMGGGDLLKNEAGYFGQVRNTKKSSQRLKETLAEHDLAVALC LLMAQQKHCVVYRETDQSHLKLVGKLYDQCQDTLVQFGTFLGSTMTVDEYVERLPSIHSM LQDNHIHSDVAFFLARPMFAHAINIKYDALRKADPNYKKMSTSMKQAKYAEAAQFVMAPV AQSVRPLHPLKVWEDISPQFLVTFWSLSMYDLFVPVESYQREINKLKQQAAQASDSKEMN VSKVKKEQERCGTLIEKLQDEKRKQEEHVEKVFAYLRQEKDSWFLSRSAKSAKNETITQF LQLCLFPRCTFTTVDAMYCAKFVHTIHSLKTANFSTLLCYDRLFCDITYSVTSCTENEAN RYGRFLCAMLETVMRWHSEKAIFDKECSNYPGFVTKFRVSNQFSEANDMVGFENYRHVCH KWHYKITKAIVVCLDSKDYVQIRNSLIILIKILPHFPVLSKLSSILERKVEKVREEERGQ RQDLHVLATSYSGQLKARAPNMIRESDFHHVGEKTGKIQENTNNDSNDKVSNGVVPKEVS NGEAKAEKDSKEQREKRNVANQVHHEITEKVRKKEEPKETLEAKEKHVKKEEIKEEENIE KKDRKYYKEEHYYSGGVDNLDRDLSSVSNSSASSGPPQDGPERVSETKRRKVESIPKQEG RRAEVVVDKKERSAKAKVRDEQKELRREKKLSRKRDRTEETAVAAEQKRRKDDDRAKGTH QNGDLPEHREKHHYSKEKSPYTKERAHEREGREGRDKHRRSSDPKRR NT seq 4284 nt NT seq  +upstreamnt  +downstreamnt atggccggtaaatcgtggaattcagatatgtggaaaacgtgggataaacatgggaaaaat gatttcctcaagataatcaagcacaaatataaggaaggtgacgctccagaatggaaacga ggtttatacgaattaatatccaacggagttcgtggaagcataaagaaggacagcgtagtt actactcttggagaactcgttagcatcgatgctgccatcccatcagccattgtagatatt ttcactctcatagatgccgaagcccagaatgacgaaagaaataatttctattacatcgta aaagaatgcgaaaagtttttgacagataggattttgacggaacgtctggaaatcgagact cttcaggacgtagggacgctcaagaatcgaaattttcaaacaaagtttatcaaagtgaaa acaaaactctattacaaacagagaaagttcaacctctttagagaggagagcgaaggatac tctaagcttattgtagaattaaatcaagatcgaccagccgaaggagttaccggaatcttg gaaatcgtaaaatcactaatcggatattttaatttagatcccaacagagtcctcgacata ttgttggaaacattcgaaaatcggccacaggacgacgctcttttcataccacttattcgt tcatatatgagcgatcaacaagtactttgcgaagttcttggctttaaatatcgttcgacc gcggattctacgccattctcattgcaaaaagttacagcactgatgttacaacacggtgtt attgaattagatgatattttgccttggctcgtcccagatgacaagagtattattaaagat catgctcaggcaatgaaacaggctaaagaatacgtacgtaaaatgagtgtcatttcgacc aaggacaaagaagaagtcccagaagaaaaggaaaatgttcaggacaaatacgggagtaat caaaaattcggactgtgcgaggctttgttagagatcggtgcttggcaagtagctcaaaat ttattcaaccgattgcccgatcattgtttcactgatcaacgacccattgcactggctttg tgcaaaatgattcagtcactcatcgaaccagtctatcgcaagcactgtataatttcgcca aaattgccaggtcgcaaggttccacctcttgaaagtacattagctccgaaaccaatggaa aacttgcagagtattcacgaacaattattaccaatgttgatgatactcggtccgaatttg catcatgatccaattcttatgtacaaaatcatgaggttgtgtcacgcagcgataaaacag tgtccgattgacgcgagcaagcaacttgttgacaaaacgaatactctttactacgatgtt ctaacgattctcgatggggcactgttgccatcgctttcattcatggactgcaattgttgt gtcgctgaagaaatgtggaacatcctcaaacattatccgtatcaaaatcgttacgcactt tatgcgcgttggaaaaacgacacgccgcaacaacatgcggccctcttaaggaaacgcgcg gacgctgaaaagaaaatcaaatcaatcatgaaacgtgttagcaaagaaacgattaaaccg gtcggaagatccattggaaagttaactcattcttcgccaggagttttattcgattatgta ctcattcaaattcaactttacgacaaccttataggtcccgtcgtcgattctctaaaatat ttaacaaatatctcgtacgatgtgcttggttactgtttggtcgaggctctcgccggtgct gatcgagacagatttaaacatgatggtacaagcatatcattgtggttacagtcattagcc tcgttttgcggtgctattttcaaaaaatataacatcgaattgactggtctccttcagtac gttgcggatcaactaaaagcacaaaaaagcttggatcttcttattctcaaagaaatagta caaaaaatggcgggtattgaagcagctgaggaaatgactgccgatcaactcgacgcgatg ggcggtggagaccttttgaaaaacgaggctggttacttcggtcaagtacgaaatacaaaa aaatcatcgcaacgattgaaggagactttggcagaacacgatttggccgtagcactttgt ttattgatggcacagcagaagcactgtgtagtttatcgtgaaactgatcagtcccatctc aaacttgttggtaaattatacgaccagtgccaagacaccctcgtccaattcggaactttt ttgggctctacgatgacagtcgacgagtatgtcgaaagactcccgtccatacactcaatg ctccaagacaatcatatacattcggacgttgcctttttcctcgcacgtccaatgtttgca catgctataaacatcaaatatgatgctctccggaaagctgacccgaattacaagaaaatg tcgacgtcaatgaaacaagctaaatatgcggaagccgctcaattcgtaatggcaccggtt gcgcaatcggttcgtcctttgcaccctctcaaagtttgggaagacatatctccgcaattt ctcgttacattctggtccttatcgatgtacgatttattcgttcctgtggagagttatcag cgagagattaacaagctgaagcaacaagctgctcaagcttcggactcgaaagaaatgaac gtcagtaaagtgaaaaaagaacaagagcgttgtgggacgttaatcgaaaagcttcaggac gagaagagaaaacaagaagaacacgtggaaaaagtatttgcctatctacgacaagagaaa gattcttggtttctgtcgagaagtgcaaaatctgcaaaaaacgaaacaatcacacagttt ctacaactctgcttattcccacgatgtacttttactaccgtcgatgcaatgtattgcgct aaattcgtacacaccattcattcactcaagactgcgaatttttcaacgttactttgctac gacagactcttttgtgatataacttactctgtaacttcttgcaccgaaaacgaggcgaat cgttatggacggttcctgtgtgcaatgctcgaaacagtaatgagatggcactctgagaaa gcgatattcgataaggaatgtagtaattaccctggcttcgtgacgaaatttcgcgtcagt aatcaattttccgaagccaatgatatggtcgggttcgaaaattaccgacacgtctgccac aagtggcattataaaattacgaaggcaatcgtagtatgtttggactctaaagattacgtt caaattaggaattctttgataatacttatcaaaatattgccacactttccggtgctttct aaactttcatccattctcgagcgtaaagtcgagaaagtacgggaggaagaacgtggacaa cggcaagatttgcacgttctcgcgacctcttacagcggacaattgaaagcgagagcaccg aatatgattcgtgaatcagattttcatcacgtcggcgaaaagactggaaaaatacaagag aatacgaacaatgatagcaacgataaagtcagcaatggggtagtaccaaaagaggtttcg aacggtgaagcaaaagccgaaaaggatagcaaagaacaacgtgaaaaacgcaacgtcgct aatcaagttcatcacgaaatcaccgagaaagtacggaaaaaggaagagcccaaggaaaca ctggaagcaaaagaaaaacacgtgaaaaaggaagaaattaaggaagaagaaaacattgag aaaaaagatcgcaaatattataaagaggaacattattatagtggaggagtcgataatttg gatcgagatttatccagtgtatcaaacagtagcgcaagttccggacctcctcaggacggg cccgaaagagtttccgaaacgaagagaagaaaagttgagagcattccgaagcaggaagga cgtcgagccgaagtcgtcgtcgataaaaaggagcgttcggccaaagcgaaggtccgagac gaacaaaaagaattgagaagagaaaaaaaactcagccgaaagagggatcgtaccgaagaa acggcagtggctgccgaacaaaaacgaaggaaggacgacgacagggcgaaaggaacccat caaaatggtgatcttccggagcacagagaaaaacatcactatagcaaggaaaaatcaccg tacacgaaggaacgcgctcacgaacgggaaggtcgcgaaggacgggacaaacataggaga agttcggatccaaaacgaagatga

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