Venturia canescens: 122409826
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Entry
122409826 CDS
T09386
Name
(RefSeq) sodium channel protein para isoform X1
KO
K04834
voltage-gated sodium channel type II alpha
Organism
vcan
Venturia canescens
Brite
KEGG Orthology (KO) [BR:
vcan00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
vcan04040
]
122409826
Ion channels [BR:
vcan04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
122409826
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_cytopl
Na_trans_assoc
PKD_channel
IQ_SCN5A_C
GPHH
Toprim
EF-hand_6
Motif
Other DBs
NCBI-GeneID:
122409826
NCBI-ProteinID:
XP_043273600
LinkDB
All DBs
Position
4:18924029..19004955
Genome browser
AA seq
2071 aa
AA seq
DB search
MSEDSDSISEERSLFRPFTRESLAAIEARIAEELAKQKELEAKRAQNEGGYGRKKKKKET
RYDDEDEDEGPQPDPMFEQGAPIPVRLHNEFPPELASTPLEDIDSFYHNQTTFVVISKGK
DIYRFSATDALWILDPFNPIRRVAIYILVHPLFSVFIITTILVNCILMIMPTTPTIESTE
VIFTGIYTFESAVKVMARGFILQPFTYLRDAWNWLDFVVIALAYVTMGIDLGNLAALRTF
RVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQIYMGVLTQKCI
KNFPEDGSWGNLTEENWERFVSNETNWYVDDAGNMPLCGNSSGAGMCEPGYTCLQGYGEN
PNYGYTSFDTFGWALLSAFRLMTQDYWENLYQLVLRSAGPWHMLFFIVIIFLGSFYLVNL
ILAIVAMSYDELQKKAEEEEAAEEEAIREAEQAALARSNRAAAHEAAREAAAASAAADQI
VKSPSDFSCHSYELFVGQEKGNDDNNKERMSIRSIESVSEQRIKPMNNNHSNAANKVRKV
SAASLSLPGSPFNVRRSSRGSHQFTIRNGRSRFVGTAGSDRKPLVLSTYLDAQEHLPYAD
DSNAVTPMSEENGTMVVPVYYASLGSRHSSYTSHASKLSYTSHVDLFGGLTNSGKPMTKE
SQLKSRSAKAPSVNGHMLDSTQKHLHDAEMEDPLGKTKQQDNPFIEPSQQHAVVDMKDVM
VLNDIIEQAAGRQSRASDQGVSIYYFATDDDEEGPTIKEKILSVILRGIDIFCVWDCCAP
WLKFQEWVALIVFDPFVELFITLCIVVNTLFMALDHHDMDPDMDKVLKSGNYFFTATFAI
EAGMKLMAMSPKDYFQEGWNIFDFIIVALSLLEVGLDGVQGLSVLRSFRLLRVFKLAKSW
PTLNLLISIMGRTVGALGNLTFVLCIIIFIFAVMGMQLFGKNYTDNVDRFPGGELPRWNF
TDFMHSFMIVFRVLCGEWIESMWDCMHVGDVSCIPFFLATVVIGNLVVLNLFLALLLSNF
GSSNLSAPTADNDTNKITEAIDRIARFIQWIKRNCAEAAKFMRAKFTNQISDQAPGEGPS
NSWKEDGLDRDGDRDLADAELDGYRDKKSAKEFNNQLEVAIGDGMEFTIHGDLRNKLTRE
RLSINNTKAIGNSINHRDYGLDRDYINHHDEDTISNKSYGSHKNRPFKDESHKGSMDSLD
DGEEKKDASKEDLDDQDDLENDIQDDEIGHERPVDGEIIDDEYPADCCPDNCYKKFPFLA
GDDNAPFWQGWANLRLKTFQLIENKYFETAVITMILLSSMALALEDVHLQQRPILQDILY
YMDRIFTVIFFLEMLIKWLALGFAKYFTNAWCWLDFIIVMVSLINFVASLAGAGGIQAFK
TMRTLRALRPLRAMSRMQGMRVVVNALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGKY
YKVSEPRSSFIIPKNFYSSLVIVVYLINTLQCVDMNKTTLSHEIIPDRNACIAENYTWEN
SPMNFDHVGKAYLCLFQVATFKGWIQIMNDAIDSRDINKQPIRETNIYMYLYFVFFIIFG
SFFTLNLFIGVIIDNFNEQKKKAGGSLEMFMTEDQKKYYNAMKKMGSKKPLKAIPRPRWR
PQAIVFEIVTDKKFDMIIMLFIGFNMLTMTMDHYQQSDAFSNVLDYLNMIFIVIFSSECL
MKIFALRYHYFKEPWNLFDFVVVILSILGLVLSDIIEKYFVSPTLLRVVRVAKVGRVLRL
VKGAKGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFFMHVKDKSGLDDVYNFKT
FGQSMILLFQMSTSAGWDGVLDGIINEEDCQEPNNEIGYPGNCGSSTIGIAYLLSYLVIS
FLIVINMYIAVILENYSQATEDVQEGLTDDDYDMYYEIWQQFDPDGTQYIRYDQLSEFLD
VLEPPLQIHKPNKYKIVSMDIPICKGDLMFCVDILDALTKDFFARKGNPIEETTELGEVQ
ARPDEIGYEPVSSTLWRQREEYCARLIQNAWRKHKQQRLGGPSEESDDPDMDPRLRQTAV
LVESDGFVTKNGHRVVIQGRSPSVTSRTADV
NT seq
6216 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaagattctgactccatatcagaagaacgaagcttgttccgtccgttcacgcgg
gaatccctggctgcgatcgaggctcgcatcgccgaagagctcgccaaacagaaagagctc
gaagctaaaagggcgcaaaacgagggaggttatggacggaagaaaaagaaaaaagaaact
cgctatgacgacgaagacgaggacgagggcccacagcccgatcctatgttcgagcaagga
gctcccattccggtccgactgcacaacgaatttccccctgagctggcctccacacccctc
gaagatatcgattctttctaccacaatcaaacaacgttcgtggtcatcagcaaggggaag
gacatatacagattctctgcgacggatgcgttatggatcctcgatccgttcaatccaata
cggcgtgtggcgatctatattttggttcatccactcttttctgtgttcatcatcaccact
attttggttaactgcatactcatgatcatgcccaccacgcccaccatcgaatccactgaa
gtgatatttacgggcatctacacatttgagtccgccgttaaggtgatggcgaggggtttc
attctgcagccttttacctatcttagagatgcatggaattggctcgacttcgtagttata
gctttagcttatgtgacgatgggcatagatctaggcaaccttgccgctctcaggacattt
cgagtcctccgagccttgaagactgtcgctattgtaccaggtctcaaaaccattgtcggc
gctgtgatagagtcagtaaaaaacctgcgcgatgtgataatcctaacaatgttctcccta
tccgtctttgcgttaatgggactccaaatttatatgggagtcttgacgcaaaagtgtata
aaaaacttcccagaagatggctcgtggggaaacctcaccgaagaaaactgggaacgattc
gttagtaacgaaacaaattggtacgtcgatgacgctggaaacatgcccttgtgtggaaac
tcgtccggagccggtatgtgcgagcccggttacacgtgtctccaaggctacggcgagaat
ccgaattacggttacacgagcttcgatacgttcggttgggcactattatcggcgttccgt
ttgatgacccaggattattgggaaaatttgtatcaattggtcctgagatcggccggtcct
tggcacatgttattcttcattgtcatcattttccttggctcgttctatctcgtcaacttg
atcctcgccattgtcgctatgtcttatgacgagctgcagaaaaaggcggaggaggaagag
gcagccgaggaggaagcgatacgggaagctgaacaggccgctttagcgagatccaacaga
gccgctgcacacgaggcggcccgtgaagccgctgctgcctctgcagcagccgatcaaatc
gttaaatcaccctcagacttttcgtgtcacagttacgagttgttcgtcggccaggaaaaa
ggcaacgacgataacaacaaggaacgcatgagcataaggtccatcgagtctgtcagcgag
caaagaataaagccgatgaacaacaatcacagcaacgctgctaataaagttcgcaaagtt
agcgctgcaagccttagtctacccggctcaccgttcaacgtaaggagaagcagtcgtggc
agtcatcaattcacgatacgaaacggtcgttcaagattcgtcggtacagcgggtagcgat
agaaaaccgctcgtactatcaacttatctcgacgcccaagagcacttgccatatgccgac
gattcgaacgccgtcacacccatgtccgaggaaaatgggactatggtcgtaccggtttat
tacgccagtttgggctcccgtcactcctcgtacacgtcacacgcgtccaaattatcctac
acctcgcatgttgatttgttcggtggcctcactaactccggaaaaccaatgaccaaagag
agtcaactcaaaagtagatcggcgaaggcaccttccgttaatggccacatgttggattcg
acgcaaaaacaccttcatgacgccgaaatggaggacccgttgggcaaaacgaaacagcaa
gacaacccgttcatagagccttcccaacaacatgctgtggttgacatgaaagatgtgatg
gtactaaatgatataatcgaacaggccgctggtcggcagagcagagcatcggatcaagga
gtttcgatctattactttgcaacagacgacgatgaagagggtccgactatcaaggagaaa
atactgtccgtcattttacgaggaatcgatattttctgcgtttgggactgttgcgcgccg
tggctcaaatttcaggagtgggtcgcactcattgttttcgatccgtttgtagagctcttt
atcacgctctgcatcgttgttaacactttgttcatggctctcgatcatcacgacatggat
ccagatatggacaaagtcctcaaatccggtaattacttttttactgcaacgtttgcgatc
gaagcgggcatgaagctgatggcgatgagtccgaaggattactttcaagaaggatggaat
atattcgatttcataatcgtcgccctttcgcttctcgaagtcggtctcgacggggttcaa
ggattgtccgtattgcgttctttcagattgttgagagtattcaaattggcgaaatcgtgg
ccaacgctgaatctgttgatatccatcatgggcaggacggtcggagctcttggcaacttg
accttcgtattgtgcattatcatattcatatttgccgtgatggggatgcagctgtttggc
aaaaattacacggacaacgttgatcgtttccccggtggtgaattgccgagatggaatttc
accgatttcatgcactcatttatgatcgtatttcgcgtactgtgcggtgaatggatcgaa
tcgatgtgggactgcatgcacgtaggtgacgtttcctgtataccgttcttcttggccacc
gtcgtcattggtaacttggtcgtactcaatctcttcttggccttgcttttgagcaatttc
ggttcgtcaaacttgtcagctccgacagccgacaacgatacgaacaaaataaccgaggcg
attgaccggatagcacgttttatacagtggatcaagcgaaactgcgctgaggctgctaaa
ttcatgagagccaaattcaccaaccagatatccgatcaggcgccaggtgagggaccgtcc
aacagttggaaagaagatggattagaccgggacggggaccgagatctggcggatgccgaa
ttggatggatacagggacaaaaagagcgccaaagaattcaacaatcagttggaagtcgct
atcggtgatggcatggaatttaccattcatggagatctgagaaacaagttgacgagagag
aggcttagcataaataacaccaaggccattggtaattccattaaccatcgggattatgga
ctcgatcgcgattacataaatcatcatgacgaggatactataagcaacaaatcgtatggc
agccacaagaatcgtcctttcaaagatgagagccacaaagggagcatggactcgttggat
gatggagaagagaaaaaagatgcgagcaaagaggatctcgacgatcaagatgatttggaa
aatgacattcaagacgatgagatcggccacgagaggccggtcgatggtgaaataatcgat
gacgaatatccggcggattgttgccccgacaattgctacaaaaagtttccgttcttggcc
ggcgacgacaatgctcccttctggcaaggctgggccaatctcagactaaagacttttcaa
cttatcgagaacaagtacttcgagacagctgttatcactatgatcttgctcagcagtatg
gcactcgccctcgaggacgttcatctccaacagaggcctatactccaagacatattgtac
tacatggatcgaatcttcacagtcatcttctttctcgagatgttaataaagtggctggcc
cttggatttgcgaaatactttacgaatgcctggtgttggctcgactttatcatcgtcatg
gtttcgctcattaacttcgtagcgtcgctcgctggcgcgggcgggattcaagccttcaaa
acaatgaggaccctaagggccctaaggccactcagggcgatgtctagaatgcagggaatg
cgggtggtcgtcaacgcattggtacaagcgataccttccatcttcaacgtcttgctggtt
tgccttatattctggttgatatttgctataatgggagtgcaattgtttgctggaaaatac
tacaaagtaagtgagccacggtcgtcgtttatcattccgaaaaatttttattccagtctc
gttattgttgtttatcttataaacactttgcagtgcgtcgacatgaacaaaacgacgttg
agccacgaaataataccggacagaaatgcctgcatcgctgaaaattacacgtgggaaaat
tcgccaatgaacttcgatcatgttggaaaagcttatctgtgtctctttcaagttgctact
ttcaaaggttggatccagattatgaacgacgcgatcgattcgagagacataaataaacaa
ccgatacgcgaaacgaatatttatatgtatctctactttgtattcttcatcatatttgga
tcgttttttaccctcaatctatttattggagttatcatcgataacttcaatgagcaaaag
aaaaaagctggcggttcgctcgagatgttcatgacggaagatcagaagaagtattataac
gctatgaaaaaaatgggcagtaagaaaccactgaaggcgattccccggccaaggtggaga
ccccaagcaattgtgtttgaaatagtgacggacaaaaagttcgatatgataatcatgttg
ttcatcggattcaatatgttgactatgacaatggaccattaccaacaaagtgacgcgttc
agtaacgtgctggactacctcaacatgatattcattgtgatattcagcagcgagtgtctc
atgaagatttttgccctgcgataccactacttcaaggagccatggaatctctttgatttt
gttgttgttatattatcaatattaggcttggtactgagcgacattattgagaagtatttt
gtctcgcccaccctcctcagggtggtcagagtggctaaagtcggacgagtattgcgtctc
gtaaaaggcgcaaaaggcataagaactctgctattcgctctcgcgatgtcattgccagct
ctattcaacatttgcctcctgcttttcctcgtgatgtttatattcgcgatattcggaatg
tcattcttcatgcacgtcaaagacaagagcggtctcgacgacgtgtacaactttaaaacg
tttggacagtcgatgatactgctgttccagatgtcaacttcagccggttgggacggtgta
ctcgatggcattataaacgaggaagattgccaagagccgaacaacgaaataggctatcca
ggcaactgtggatcatcgacaataggaattgcatacctgctatcgtatctcgtcatcagc
ttcctaatcgtcatcaacatgtatatcgcggtgatattggaaaattattcacaagcgacc
gaagatgtgcaggagggattgaccgatgatgactacgatatgtattacgaaatatggcag
caattcgatccagacggaacgcagtacatacgatacgaccagttgtcagaatttttggac
gtgctggagcctccgttgcagatacacaagccgaacaagtacaagatagtgtcgatggat
atccccatatgtaagggtgaccttatgttttgcgtggatatcctcgatgcgctcactaaa
gactttttcgcgcggaagggcaatccgatcgaggagacgacggaattgggcgaggtccag
gcccgtcccgacgagattggttacgagccggtttcctcgaccctgtggcgccagagagag
gagtattgcgcccggttgatacaaaatgcttggagaaagcacaaacagcaaaggctcggt
ggcccgagcgaggagagcgacgatcctgacatggatccccgcctccgacagaccgccgtt
ctcgttgagagcgacggtttcgttaccaagaatggccatcgggttgtcattcagggccgt
tcgcctagcgttacatcgagaaccgcggacgtttga
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integrated database retrieval system
