Varibaculum cambriense: CYK25_005000
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Entry
CYK25_005000 CDS
T09090
Symbol
rapZ
Name
(GenBank) RNase adapter RapZ
KO
K06958
RNase adapter protein RapZ
Organism
vcb
Varibaculum cambriense
Brite
KEGG Orthology (KO) [BR:
vcb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vcb03019
]
CYK25_005000 (rapZ)
Messenger RNA biogenesis [BR:
vcb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
CYK25_005000 (rapZ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapZ-like_N
PapZ_C
P23-45_gp39_N
HTH_12
Motif
Other DBs
NCBI-ProteinID:
WIK89511
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All DBs
Position
complement(1082171..1083124)
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AA seq
317 aa
AA seq
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MDEAHRQYESSPPTVPEGVPILDETAPPRDANVPEMIIITGMSGAGRSRAGQALEDLDWY
VVDNLPPAMLLPFADMMTPEGEGIHRLAAIVDVRSGELFSKLQHALDELSRRHIRYQLVF
LDADERVLVRRYESNRRPHPLQGGGRILDGIRSERRILAPIRARADALIDTTNMNVHDLN
RHMRDVVAGEGERPMKLTVMSFGFKNGIPLDADWVCDVRFLANPYWVSELRHLTGRDTPV
AKYVLNQPGAEEFAENMVNMLTPIFDGYLTELKPFVTIAVGCTGGQHRSVALAEKMSELF
RAQGLPVRTVHRDLGLE
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atggatgaagctcaccgacaatacgaatcttccccgcccactgttcccgagggagtaccg
attcttgacgaaaccgcgccacctcgggatgccaatgttcccgagatgataattattacc
ggaatgtcgggggcgggacgttcgcgagccgggcaggcattagaggatctggactggtat
gtagtcgataatctgccgcccgcaatgttactgcccttcgcggacatgatgactccggaa
ggggaaggcattcaccgcctggcagcgattgtggatgtacgcagcggggaactgttttct
aaactgcaacatgctttggatgaactatcgcggcgccatatccgttatcagctggttttc
ttagacgcggacgaacgggtcttggtgcgtcgctatgaatctaatcggcgtccccatccg
ctgcaaggaggaggacggattctcgacggaattcgctccgagcggcggatactggctccc
attcgtgcccgtgccgatgccctaatcgacaccaccaatatgaatgtgcatgatttaaat
cggcatatgcgagatgtggtggctggtgagggggagcgcccgatgaaactcaccgtaatg
tcctttgggtttaaaaatgggatacccctagacgctgattgggtttgtgacgtgcgcttt
ttagctaacccctattgggtgagcgaactgcggcatttaactggccgggacacaccggta
gcgaaatatgtgctgaaccaaccgggagccgaagaatttgcggaaaacatggtgaatatg
ttgaccccgattttcgacggatatctaacggagctcaaacccttcgtaactatcgcggtc
ggttgtaccggcgggcaacatcgttcggtggcactggctgaaaaaatgagtgagctattc
cgggcgcagggcttgccggtacgcactgttcatcgagatctggggctggaatga
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