Vanessa cardui (painted lady): 124532949
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Entry
124532949 CDS
T09161
Name
(RefSeq) CCR4-NOT transcription complex subunit 10
KO
K12607
CCR4-NOT transcription complex subunit 10
Organism
vcd
Vanessa cardui (painted lady)
Pathway
vcd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vcd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
124532949
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vcd03019
]
124532949
Messenger RNA biogenesis [BR:
vcd03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
124532949
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GFIT
Motif
Pfam:
TPR_19
TPR_2
TPR_14
TPR_16
ANAPC8
TPR_1
TFIIB_C_2
Motif
Other DBs
NCBI-GeneID:
124532949
NCBI-ProteinID:
XP_046964041
LinkDB
All DBs
Position
10:7589996..7591874
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AA seq
565 aa
AA seq
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MANSKDEPAFLAHQCYLKKDYAGAMQHLNELETIVGNNSSLLKRVQHNKAVVEFAISDMK
NIDAFKKSITQFTGLNFSEVDIKDTNIPCLLYNYAVVLYHSRYYYQCTVVLEKLLTCKNI
NDTKLHHRIILLLLEATLCRRTYEKTLEIAKNHGEPLKSNNEVSDLYERLVSRAQLYLGQ
KVNLKPDSIENIFIIAQQKFLNGDTIDSANTLGQYKTMKFNYDLKTQGEDIWAAINNNLG
VIYLSIKKPFLATKYFQHAVKEHFRAMESEDSEMLIACKDRPLYVYNLGLALLAANNSEG
AFECLVEAARHYPNNPRIWLRLAECCVKKCCNEEAQQFTVKKLGSGPHTRILLSKENKEK
YSTSGESFAIPSLSLEFAALCLRNAISLLPDQEAVSDTSTASIQAPPGPPINWKQRCDLK
NSILVLQSYIFLYLQDPLSALMSANELLSQSDATTCQKAWAHIYAAEALINLDKITDAVD
HLHPPMIHDLVSVLPSQMRDMIAVSVWAKAAVCHILRGDLITARKILLQINSPRVLPLQM
YLEICTGNIENCHTILRKIRISNTS
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atggcaaattccaaagacgagcctgctttccttgctcatcagtgttatctaaaaaaagac
tacgccggtgcaatgcaacatttaaacgaattggaaactattgtcggcaacaacagcagt
ttgttgaaacgagtacaacacaacaaagctgttgtcgaatttgccattagtgacatgaaa
aatattgatgcattcaaaaaatcaattacacaattcacaggacttaatttttctgaagtt
gatattaaagatacaaatataccttgcttgttatacaattacgccgtggtgctatatcac
tcgcgctactactatcaatgtacagtcgtattagaaaagttattaacctgtaagaatata
aatgacactaaactgcatcatagaatcatactattattgcttgaagctacattgtgtcgt
agaacatatgaaaagacattagaaatagccaaaaatcatggtgaacccctaaagtctaat
aacgaagtgagtgacttatatgaaaggttagttagtagagcacagctgtatcttgggcaa
aaggttaacttaaagcctgattctattgaaaacatttttatcatagcccaacagaagttt
ctgaatggtgatacaatagattcagctaacacacttggtcaatataaaacaatgaaattt
aattatgatttaaaaacccaaggagaagatatttgggctgctatcaataacaaccttggt
gttatatatttgtctataaaaaaaccatttttggccacaaaatactttcaacatgctgtc
aaagagcacttcagggccatggaaagtgaggacagtgaaatgttgatagcatgtaaggac
agaccattatatgtgtataatttggggttagcattgttagctgctaataattcagaagga
gcatttgagtgtttagtggaggctgctcgtcactatccaaataatcctcggatatggctg
agattggcagagtgctgtgtcaagaaatgctgtaatgaagaagctcaacagtttaccgtt
aagaaactaggtagtggcccacatacaagaatccttctatcaaaagaaaataaggagaaa
tattcaacatctggtgaatcatttgctattccttcactttcactggaatttgcagcactt
tgtttgagaaacgcaataagtttacttcccgatcaggaagcggtatctgacacaagtaca
gcttcaattcaagcaccaccgggcccacctataaactggaaacagaggtgcgacctaaag
aattcaatattagtcctccagagttacatatttctttatttgcaagatcctctgtcagct
ctcatgagtgcaaatgaattattgagtcaatcagatgcaacaacttgtcagaaggcatgg
gcacacatttatgctgctgaagcattaattaacttagacaaaatcacagatgcagtggat
cacttacatcctcctatgatccatgatttagtttcagtcctaccatctcaaatgagagat
atgattgctgtgtccgtttgggctaaagctgctgtttgtcatatattaagaggtgattta
attacagcaaggaaaattttactacaaatcaattcaccaagagttctaccactacaaatg
tatttggaaatttgcacagggaatattgaaaattgtcatacaatattgcgaaagattcgt
atatccaatacatcttaa
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