Vanessa cardui (painted lady): 124534550
Help
Entry
124534550 CDS
T09161
Name
(RefSeq) LOW QUALITY PROTEIN: sodium channel protein para
KO
K04834
voltage-gated sodium channel type II alpha
Organism
vcd
Vanessa cardui (painted lady)
Brite
KEGG Orthology (KO) [BR:
vcd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
vcd04040
]
124534550
Ion channels [BR:
vcd04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
124534550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
PKD_channel
IQ_SCN5A_C
GPHH
PFF1_TM
Zip
Motif
Other DBs
NCBI-GeneID:
124534550
NCBI-ProteinID:
XP_046966403
LinkDB
All DBs
Position
13:complement(5756312..5824315)
Genome browser
AA seq
2183 aa
AA seq
DB search
MSEDLDSISEEEQSLFRPFTRESLAVIEARIAEEHAKQKELEKKRAEGETDLGRTKKKKE
VRYDDEDEDEGPQPDATLEQGLPLPVRMQGSFPLELASTPLEDIDPFYHNQTTFVVISKG
KDIFRFSATNALWILDPFNPIRRVAIYILVHPLFSLSIIVTILGNCILMIMPTTPTVEST
EVFFTGIYTFESAVKVMARGFILQPFTYLRDAWNWLDFVVIALAYVTMGIDLGNLAALRT
FRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQIYMGVLTQKC
IKVFPEDGSWGNLTDENWERFCQNETNWYGEDGDYPLCGNSSGAGQCEPGYICLQGYGPN
PNYGYTSFDTFGWAFLSAFRLMTQDYWENLYQLVLRSAGSWHVLFFVVIIFLGSFYLVNL
ILAIVAMSYDELQKKAEEEEQAEEEALREAKQKAAARADKQEAREAHAREQAAAAEAAAY
AEAHPAKSPSDSSCQSYELFVNQERGNQDDNTRERMSLRSDPFQDSVSTQPTHKPTANES
HHEPARRQRKVSMVPHPERINKYGQLSYGPLREGSQASLSLPGSPFNLRRGSRGSHQMAL
RPNGRNRYPPGADRKPLVLSTYLDAQEHLPYADDSNAVTPMSEENGAIIIPVYYANLGSR
HSSYTSHQSRLSYTSHGDLLGGKAQTKEARLRGRSASRNHSVTSQPHAYPLPRQDSSLAS
RPLREYEISTTECTDEAGKVLKQSNDNPFIESSQQPNVVDMRDVMVLNEIIEQAGRQSRA
SEQNVSVYYFPTAEDDEDGPTLKQRLLGCLMKGIDFFCVWDCCWLWLEFQKYVALLVFDP
FVELFITLCIVVNTLFMALDHHDMDRDMEKALKSGNYFFTATFGIEAMLKLIAMSPKFYF
QEGWNVFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGRTMG
ALGNLTFVLCIIIFIFAVMGMQLFGKNYVDYVDRFPDGDLPRWNFTDFMHSFMIVFRVLC
GEWIESMWDCMLVGDVSCIPFFLATVVIGNLVVLNLFLALLLSNFGSSNLSSPTADQDTN
KIAEAFNRISRFIDWVKKNAADFLKLVKNKLTNQIAIHAPERVDNELELGADLDDGVLYK
DKKLKDQVEVAIGDGMEFTIPGDNKYKKGKILMNNINAITDNHTDNRINCDLNHHGYPIQ
DDDTISQKSYGSHKIRSFKDESHKGSADTIDGEEKKDASKEELGLEEEMIPEEEAGQIDL
AKLDIKAVEGDGILEDSPADCCPEPCYQRFPFLAGDDESPFWQGWAMLRLKTFRLIENTY
FETAVITMILLSSLALALEDVHLPHRPILQDILYYMDRIFTVIFFIEMLIKWLALGFQKY
FTNAWCWLDFIIVMVSLINFVAALCGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVNA
LVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGKYFKCVDMNHTTLSHEIIPDRNACILEN
YTWENSPMNFDHVGKAYLCLFQVATFKGWIQIMNDAIDSREVGRQPIRETNIYMYLYFVF
FIIFGSFFTLNLFIGVIIDNFNEQKKKAGGSLEMFMTEDQKKYYNAMKKMGSKKPLKAIP
RPRWRPQAIVFEIVTDKKFDMIIMLFIGLNMLTMTLDHYQQSETFSAVLDYLNMIFIVIF
SSECLLKIFALRYHYFVEPWNLFDFVVVMFSILSLVLSDIIEKYFVSPTLLRVVRVAKVG
RVLRLVKGAKGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFFMHVKDKGGLDDV
YNFKTFVQSMILLFQMSTSAGWDGVLDGIINEEECDLPDNERGSPGNCGSATIGITYLLS
YLVISFLIVINMYIAVILENYSQATEDVQEGLTDDDYDMYYEIWQRFDPEGTQYIRYDQL
SDFLDVLEPPLQIHKPNKYKIISMDIPICRGDMMFCVDILDALTKDFFARKGNPIEEPVD
VGRPDEVGYEPVSSTLWRQREEYCARLIQHAWRRHRRAQSPGGGSASGAEGGGASGTEAE
GAPTAVLLDAGAGGAHRVVLQAAGAAPRPPEPAPPPXARLTRAGARAAARARRRGAAAAA
RTAARALEPTQAHLILFYARCFEYVVSAGERSDASWCARALSRTIALRVWRRERSSECFI
FVWPKLARRFVLRPMFAFTEYIF
NT seq
6552 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaggacttggactcgatcagcgaggaagaacaaagcttgttccgacccttcacc
cgagagtcattggccgtaatcgaggcccgcatagctgaagagcatgccaagcaaaaagaa
ctcgagaaaaaacgagcggaaggcgagaccgatttggggcggacgaaaaagaaaaaagaa
gtgcggtacgacgatgaggatgaagatgaaggtccccaaccagacgcgaccttggagcag
ggcctgccgctgccggtgcggatgcaaggctccttccctctcgaactcgcctccacacca
ctcgaggacatcgatcctttctaccacaaccaaacaacattcgtagttataagcaagggt
aaagatatcttcagattttcggcgactaatgccttgtggatactggatccattcaatcca
ataagaagagtggccatatatatattagtgcatcctttattctctctgtccattattgtc
acaatccttgggaattgtatactcatgataatgcctaccacaccaactgtcgaaagtact
gaagttttctttaccggcatctacacctttgaatcggcggtgaaagtaatggccaggggt
ttcatactacagccattcacataccttagagatgcatggaattggcttgacttcgtagtt
atagctttagcttatgtgacgatgggcatagatctcggcaacttggccgctctaagaacg
ttcagagttctccgagctttgaagactgtggccatcgtaccgggcttgaagactattgtc
ggtgcggtgatagagtcggtgaaaaatcttcgagatgtgattatattgacgatgttttca
ctatctgtgttcgcacttatgggtctgcaaatctatatgggggttttgacacagaaatgt
attaaagtctttccggaagacggtagttggggtaacctcactgacgagaactgggaaaga
ttttgtcaaaatgaaacaaactggtacggtgaagacggagattatcccctttgtggaaat
tcatcaggagcaggacagtgtgaaccaggctacatatgtttacaaggctatggaccaaac
cctaactacggatacacgagtttcgatacttttggttgggctttcctatcagcatttcga
ctcatgacacaggactattgggaaaatctatatcaactggtgctaaggtctgctggttca
tggcacgtcttgttcttcgttgtgatcattttcttgggctcattctatctcgtcaacttg
attttggccatcgtcgccatgtcatatgacgagttacaaaagaaagctgaagaagaggaa
caagccgaagaagaagcccttagggaagcgaagcaaaaagcggcagccagagcggataag
caggaagccagggaagcccacgcccgcgagcaggctgctgcggcagaggcggccgcttac
gccgaggcacatcccgctaaatctcccagcgactcctcctgtcagagctacgagctgttc
gtgaaccaggagcgcggcaaccaggacgacaatacgcgcgagcgcatgtccctccgtagc
gaccccttccaggactcggtgagcactcagcccacgcacaagcccaccgccaacgaatcg
caccacgaaccggcacgccgacagaggaaggtcagcatggttccccaccccgaacgcata
aataaatacggacagttgtcatatgggccactgcgcgaaggctcgcaggcttcattgtcg
ctccctggatcaccgttcaatttacgccgaggatctcgtgggtcgcatcaaatggctctt
agaccgaacggaagaaatcgctatccacccggagctgatcgaaaaccactggttctttca
acatacttggacgcacaggaacatctgccgtacgctgacgattcaaacgctgtcacgcca
atgtctgaagaaaatggtgctataattatacctgtctactacgccaatttaggttcgagg
cattcttcttacacgtcgcatcaatctcgattatcgtacacttcacatggtgacctacta
ggtggaaaagcgcaaacgaaagaagcaaggctaagaggccgatcggcgtccagaaaccat
agcgtaacatcacaaccgcatgcctacccactgccaagacaagattcgtcgctcgcatct
agaccgcttagagaatatgaaataagcacaacggaatgtacagacgaggctggcaaagtg
ttaaaacagtctaacgacaacccttttatagagtcatctcagcagcccaacgttgtagat
atgagagatgtaatggtactaaatgaaattattgaacaagctggcagacaaagtagagct
agtgaacaaaacgtgtcagtgtactacttcccaacagctgaagacgatgaggatggaccc
accttaaaacaaagactccttgggtgcttaatgaaaggaatagacttcttttgtgtatgg
gactgctgttggttatggttggagttccaaaaatacgtggctcttcttgtattcgaccca
ttcgtagaactgttcatcacgctatgtattgtggtcaacactttgttcatggccttggac
catcatgatatggacagagatatggaaaaagcgctgaaaagtggcaactattttttcacc
gctacctttggtatagaagccatgttaaagttaatagctatgagcccgaaattttatttt
caagaaggttggaacgtttttgatttcatcatcgtggccttatcattattagaattgggt
ctggaaggtgtacagggtttgtctgtgttacgttcatttcgtttgcttcgagtattcaaa
ttggcaaagtcatggccgacacttaatttactcatctctataatgggtaggacgatgggt
gccttgggcaacctgaccttcgtattgtgcatcattattttcatatttgccgtgatgggt
atgcaactattcgggaaaaattatgttgactatgtagaccgttttccggacggagatctt
ccacgttggaacttcaccgacttcatgcacagtttcatgatagtctttcgagtactatgt
ggagaatggatagaaagcatgtgggattgtatgctcgtcggagacgtgtcctgcatacca
tttttcttggctactgttgtcattggcaatcttgtggttctcaacctcttcttggccttg
ttactgtcaaattttggatcatcgaacttatcgtcaccaacggccgatcaagacaccaac
aaaatagccgaagcattcaacagaatatcgaggttcatagattgggttaaaaagaacgca
gcggacttcttgaagttggtgaaaaataaactcacaaaccaaatagccatacacgctccc
gaacgcgtggacaacgagctcgaattaggtgccgacctcgatgacggagtactgtataaa
gataagaaactaaaagaccaagtagaagtagcaatcggtgacggaatggaatttacaata
ccaggtgacaataagtacaagaaaggtaaaatactaatgaataatatcaacgcaataacg
gataaccatacggacaatagaattaattgtgatcttaaccatcacggataccccattcag
gacgatgatactataagtcagaaatcatatggaagccacaaaataagatcctttaaagat
gaaagtcacaaaggttcagcagatacgatcgatggcgaagagaaaaaagacgccagtaaa
gaagaattggggctggaggaagaaatgataccggaagaagaggctggacaaatagatctg
gctaaattggacataaaagccgtagaaggtgatggaatacttgaagactctccagcagac
tgctgtccagaaccttgttatcaacgcttcccgtttttggctggagatgatgagtcacca
ttttggcaaggatgggccatgctgagactgaaaaccttccgacttattgaaaatacatac
ttcgaaacggctgtgataactatgattttactcagtagtttggctttggctctagaagat
gtccatttaccgcatcgaccgatacttcaagatatcctctattatatggaccgaatcttt
accgttatatttttcatcgagatgttgattaagtggctcgcccttggattccagaaatat
ttcacgaacgcctggtgttggctcgatttcatcattgttatggtctcgcttataaacttc
gtagcggcgctttgtggcgccggtggcattcaggcgttcaaaacgatgagaacgcttcga
gcccttcgaccgctcagggctatgagccgcatgcagggcatgagggtggtagtgaatgct
ctggtgcaagcgatcccatccatcttcaacgtgctactcgtgtgtctgatattctggctt
atctttgctattatgggtgtacaactcttcgctggaaaatattttaagtgcgtcgacatg
aaccacacaaccctaagccatgaaatcatccctgacagaaatgcctgcatcttagaaaac
tacacctgggaaaactctccaatgaattttgaccatgttggcaaggcttatttatgcctg
tttcaagttgctactttcaaaggttggatacaaatcatgaatgacgctatcgattcacga
gaggttggtcgtcagccgattcgagaaaccaacatatacatgtatttgtattttgtattc
ttcattattttcggctctttcttcactcttaacctattcattggtgtgatcattgataat
ttcaatgaacaaaagaagaaagcaggaggcagtcttgaaatgtttatgacagaagatcag
aaaaagtattataacgccatgaagaaaatgggatcgaaaaagccccttaaagcaattccc
agaccaaggtggcggccgcaagcaattgtatttgagatagtaacagataagaaatttgac
atgatcattatgttgtttattggccttaatatgttaactatgaccctcgatcattatcaa
caatcagaaacatttagtgctgtattggactaccttaatatgatattcatcgtaatattt
agttcagagtgcttactcaaaatcttcgccctgcgataccattactttgtagaaccatgg
aatctatttgattttgtcgttgtaatgttttctattcttagcttggtgttgagcgatatc
atagagaagtactttgtttcaccgactttactcagagtcgtaagagtggcaaaagttggt
agagtacttcgactcgttaaaggtgcaaagggcattcgaacattactgttcgctctggcc
atgtcactgccagctctctttaacatttgtctgctgctgttccttgtaatgtttatcttc
gctatattcggaatgtcatttttcatgcacgttaaagacaaaggaggcctagatgatgtg
tacaacttcaaaactttcgtgcaaagtatgattctactatttcagatgtctacatcggcg
ggttgggatggtgtattagacggaatcataaatgaggaagagtgtgatttgccggacaac
gaacgcggatcgcctggcaactgtggctctgcgacgataggcattacctacttactctca
tatctagtgatctctttcctcatcgtcattaacatgtacattgccgttattctcgaaaac
tattctcaggcaaccgaagacgtacaggaaggcctaactgacgatgactatgacatgtac
tacgagatatggcagcgatttgatcccgaaggaacacagtacatcagatacgatcaacta
tctgatttcttggacgttctcgagccgcctttacaaatccacaaacctaacaaatacaaa
attatatccatggacatacctatatgtcgcggtgacatgatgttctgcgtcgacatctta
gatgcgctcacgaaggacttctttgcgagaaagggcaaccccatcgaggaaccggtcgat
gtgggacggcccgacgaagtgggctacgagcctgtgtcgtcaactctatggagacagcgt
gaagagtactgcgcgcggttgattcagcacgcgtggcggcggcatcgaagagcgcagtcg
ccaggtggcggctccgcgtcgggcgcggaaggtggcggcgcgagcggtacggaggcggaa
ggcgcccccacggccgtgctgctggacgcgggcgcgggcggcgcgcaccgcgtggtgctg
caggcagcgggggcggcgccgcgcccgccggaacccgcgccgccgcccngcgcccgtctg
acccgcgctggcgctcgcgctgctgcccgcgctcgtcgacgaggcgccgctgccgctgcc
cgcaccgctgcccgagctcttgagcccacccaagcgcacttaattcttttttacgctaga
tgtttcgaatatgtagtgtcggcgggcgagcgaagcgacgcgagttggtgcgcccgcgcc
ctctcgcggacgatagccttgcgcgtgtggagacgtgagcgttcatcggagtgttttata
ttcgtgtggccgaagcttgcgagacgatttgttttgcgaccgatgttcgcatttaccgag
tatatcttttag
DBGET
integrated database retrieval system
