Vanessa cardui (painted lady): 124535454
Help
Entry
124535454 CDS
T09161
Name
(RefSeq) autophagy-related protein 16-1 isoform X1
KO
K17890
autophagy-related protein 16-1
Organism
vcd
Vanessa cardui (painted lady)
Pathway
vcd04136
Autophagy - other
vcd04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
vcd00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
124535454
04136 Autophagy - other
124535454
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
vcd04131
]
124535454
03029 Mitochondrial biogenesis [BR:
vcd03029
]
124535454
Membrane trafficking [BR:
vcd04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
124535454
Others
Specific organelles associated proteins
Auto phagosome
124535454
Mitochondrial biogenesis [BR:
vcd03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
124535454
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_1st
Beta-prop_THOC3
ATG16
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_2nd
WD40_Gbeta
Beta-prop_WDR3_2nd
EIF3I
Beta-prop_TEP1_2nd
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_WDR36-Utp21_1st
Beta-prop_Aladin
Beta-prop_TEP1_C
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_SCAP
NBCH_WD40
eIF2A
WD40_MABP1-WDR62_1st
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
Beta-prop_DCAF4
WDR90_beta-prop_4th
Beta-prop_VPS8
WD40_RFWD3
CCDC113_CCDC96_CC
Beta-prop_SPT8
CCDC93_CC
Beta-prop_IFT122_1st
FKBP15
Rod_CreS
LRRFIP
NET2A
Phage_sheath_1
DUF6212
HOOK
DUF7194
FAM76
Motif
Other DBs
NCBI-GeneID:
124535454
NCBI-ProteinID:
XP_046967632
LinkDB
All DBs
Position
14:complement(8563513..8691462)
Genome browser
AA seq
570 aa
AA seq
DB search
MEGGDWKNNIISQLQSRNKRETIAFQDIITFQSRLFDNVNTLKNENLQLTLLNERIRYSN
TESVLSSGGGVTNERIQALEQKILSQQEELTSMHRRRGESAQQIINLNAKVHDLEKNLQA
KDIIISENTALIASLRAEIQMYETNMAELQGLNQVLRDEHQALQIAFAAIEDKLRKSQDE
NRSLVERLIKYKAKDADKMNEENEHFLKSSNPTAFFINTFGRVSFGKKSDKVRKELEEAA
REGGSRSSGGSGGSADDKIMDSLPYYATSLPTKVALRFDAHDGEVNAVKWSPTDRLVATG
GADRKVKLWDVSKPGLIENKGTLVGSNAGVMSVDFDATGVYIVGASNDFASRVWTVGDQR
LRHTLTGHSGKVMAAKFLGEPTKVITGSHDRTLKIWDLRSRMCTETKFAGSSCNDLVTSD
GAGSTIISGHFDKRIRFWDIRTEMSANHIMLQGKVTSLDLSRDSNYLLACVRDDTIQLID
LRMNTIVRSFSHESFKVGCDWSRAAFGPVGRLLAVGAADGAAYVWNTHSGRLEAVLKDHT
SAVTAVSWHPQSGLLASVDRGKRAVIWGDL
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atggaaggtggagattggaagaacaatataataagtcaattgcaatctcgtaataaacga
gaaacaatagccttccaagatattataacttttcaaagtcggctgtttgataatgttaat
acattaaaaaatgaaaacttgcagctgactttattaaatgaaagaataagatattctaac
acagaaagtgtattatctagtggaggtggtgtaaccaatgagcggatacaagctttagag
caaaagattctttcccaacaagaggaactcacctctatgcacaggcgacgaggagaaagt
gctcagcaaatcattaacctaaatgcaaaagtgcatgatctagaaaagaatttgcaagct
aaagatataataatttcagaaaacaccgcattaatagcgtcacttagagcagagattcaa
atgtatgaaacaaatatggctgaattacaaggattaaatcaagtcttaagagatgaacac
caagcattacaaattgcttttgcagctatcgaagacaagttaaggaaatcccaggatgaa
aatcgatctctcgttgaaagactaattaaatacaaagccaaagatgcggacaaaatgaac
gaagaaaatgaacacttcctaaagtcaagcaaccctactgcgtttttcatcaacacgttt
ggtagagttagtttcgggaaaaaaagtgataaagtacgcaaagagttagaggaagcggcc
agagaaggtggtagcagaagtagtggaggttctggaggtagcgcagatgataaaataatg
gattccctgccttactacgcgacgtcactgcccactaaagttgcattgagatttgacgca
catgacggtgaagtaaatgccgtgaaatggagcccgacagaccggctcgtagcgaccggt
ggagctgataggaaggtcaaactctgggacgtttccaaacctggcctaatagaaaacaaa
ggtacgttggtggggtccaacgcgggcgtgatgtcggtggacttcgacgccaccggcgtg
tacatcgtgggagcctccaacgactttgcgagccgcgtgtggacggtcggcgaccagaga
ctaaggcatactttgaccggtcacagcggaaaagtgatggcagcaaaattcctcggcgaa
cccaccaaagtaatcacaggcagtcatgaccgtactctcaaaatttgggaccttagaagt
agaatgtgtacagaaacaaagttcgcaggatcatcttgtaacgatctcgtgacgtcagat
ggtgctggttccacaattatctcgggacacttcgataaacgaatacgtttctgggacata
cgcacggaaatgtcggccaatcacatcatgctccagggcaaggtcacatcactcgatctc
agcagagatagcaattacttattggcgtgtgttcgagatgatacgatacagcttatagat
ttgcggatgaacacaatagtgcgatctttcagtcacgagtcgtttaaggtgggatgcgac
tggtcgagagctgctttcgggccagttggacggctactggctgtgggtgcagcagatgga
gctgcatatgtttggaacacacattcaggaagactggaagcggtgctgaaggatcatacg
tcagcagtgacggcggtttcatggcatccacaatctggcctactggcttcagtagaccga
ggaaagagggccgttatttggggagacttgtga
DBGET
integrated database retrieval system
