Vanessa cardui (painted lady): 124538053
Help
Entry
124538053 CDS
T09161
Name
(RefSeq) transient receptor potential protein
KO
K04967
transient receptor potential cation channel subfamily C member 4
Organism
vcd
Vanessa cardui (painted lady)
Pathway
vcd04745
Phototransduction - fly
Brite
KEGG Orthology (KO) [BR:
vcd00001
]
09150 Organismal Systems
09157 Sensory system
04745 Phototransduction - fly
124538053
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
vcd04040
]
124538053
Ion channels [BR:
vcd04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
124538053
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
PKD_channel
Ank
Ank_4
Ank_3
Ank_5
Ank_KRIT1
BRE1B
Motif
Other DBs
NCBI-GeneID:
124538053
NCBI-ProteinID:
XP_046971020
LinkDB
All DBs
Position
19:6193528..6222075
Genome browser
AA seq
1157 aa
AA seq
DB search
MNRGSREELLGSSHEAVRNSTVDLHSFQEKPLTKEEKSFLLNADRGDYVTVKRLIEVYAN
KPEILDINCVDPLNRSALIAAIENENIELIKLLLGSGIKVKDALLHAIKEEYVEAVELLL
QWEEENHVPGEPYSWESVDASAATFTSDITPLILAAHRNHYEILKLLLDRGATLPVPHDV
KCGCDECVKSSQEDSLRHSQARINAYRALSSPSLIALSSADPLLTAFELSWELGRLSRME
TEFRIEYKTLRQQCQEFATSLLDHTRTSQELEIMLNYNPWDFDSWEPGERQTLGRLKLAI
KYKQKMFVAHPNVQQLLGTIWYEGLPGFKRKSIVGQCVQVAKLGAMFPVYCTIYMLAPDS
EYGQFMKKPFVKFISHSSSYMMFLMLLSLASQRAEYLVLEWSGISWLQELVEFWKSRERG
SLPGLIESTVIIFIASLVWGEIRSLWENGLLEYLSDLWNIVDFITNVFYIAWISLRFSSW
YIVQRDYHSGKDPWYPRERWDSFDPMLLSEGAFAAGMIFSFLKLVHIFSINPYLGPLQVS
LGRMIIDIIKFFFVYMLVLFAFACGLNQLMWYYAELEKHKCYHHSSVIPDFDTQERACSI
WRRFANLFETSQSLFWASFGLVDLTTFELTGIKSFTRFWALLTFGSYSVINIIVLLNMLI
AMMSNSYQIISERSDTEWKFARSNLWMSYFEDGDTVPPPFNIIPTPKHVNGWIQKVFHNK
ERGSIINKSREKARQQHEAIMRILVRRYVTAEQRARDEVGVTEDDVMEIRQDISTLRFEL
IDILANNGMKTPRINSQETTISGKKGKVMERRILKDFHIGIVEGIIKDVISKESKPKDVF
SQIAKAIVRRGSENDKKKDWNAKVRRSTIRRDPIGTTAEAATKKSRQSLRAHILDNVSAR
TIDPQKLLQYNPNLSSVTPTARVAYAKFMRSKIKSDFTETESKPDGEEGAAGEASEAKES
GSQGAAPKELKKEKPEDKNVEAKKIKVEADIENKGSQAKTEEQKQTKPSPQEPSKSGDTS
ASKPDKETTPQKKGESKDHVIQIEEPESPTSSLYMTKEEDKNLQKPISPTPSGPSEQILS
ASTLESDQQKDSKTPSVTITVEEPKDDKPKEPKKKEPKPKESPGPSKLSPSPGPPKPGIV
TDKGKSKVTGKIVSGWL
NT seq
3474 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgtggttcgagagaagaactgctcggcagctcgcatgaggccgtgcggaacagc
acggtggatttgcacagcttccaagagaagccgctgacgaaggaagagaaatctttcctt
ctaaacgcagaccgaggagattacgtcactgttaagaggttgatagaagtttacgcgaac
aagccggaaattctcgacataaactgcgtggaccctctgaacagatcagctctcatcgcc
gccatcgaaaatgaaaacatcgaactcataaagctcttgctcggttctgggataaaagtg
aaggatgcattactgcatgcgatcaaagaggagtacgtggaggctgtggaattgctactg
cagtgggaagaggagaaccatgtccccggcgagccttatagctgggaatccgtagacgcg
tcagcggcaacattcacgtcggatataacacctctgatcctagcagcgcaccgcaatcac
tacgaaatactaaaattgctgctggatagaggcgccactcttcccgtgccccacgacgtc
aagtgtggttgtgacgaatgcgtgaagtcatctcaagaggactcattaagacactcccaa
gctcgtatcaacgcgtaccgtgcactgagctctccttccctcatcgccctctcatccgcc
gaccctctgctcaccgccttcgaactgtcttgggagctgggcagactaagccgcatggaa
actgagtttagaatagaatataagacccttcgtcagcaatgccaagaattcgccacctca
cttttagaccacacgaggacatctcaggagctggaaatcatgctaaactataacccctgg
gacttcgacagctgggaaccgggcgaaagacaaactcttggaagattaaaactggccatc
aagtacaagcaaaaaatgttcgtagcacatccgaatgtacaacaattattaggaactatt
tggtacgaaggtctgccaggattcaagaggaagagcatagtaggacaatgtgtacaggtg
gctaaactcggcgctatgtttcccgtttactgcacgatatacatgttggcaccggattcc
gaatacggccagttcatgaagaaaccctttgtcaagttcatcagtcatagctcctcgtat
atgatgtttctaatgttactgtccctggcttcccaaagagctgaatatttagtcctggaa
tggtctggtatatcttggttgcaagagttggtcgaattttggaaaagccgcgaacgaggc
tccctacctggtctgatagaatccactgtcatcatcttcatagcaagtttagtatggggc
gaaataagatcactttgggagaacggactgttagaatatttgagtgatttatggaatata
gtcgactttatcacgaacgtcttttatatagcatggataagtttgcgtttctcttcatgg
tatattgtacagcgggattaccatagcggcaaggatccttggtacccaagagaacgctgg
gattcattcgatccaatgctgctctcggaaggcgccttcgcagccggcatgatcttctcc
ttcctcaagctggtccacatcttctccatcaatccctaccttgggccgctccaagtgtct
ctcggcaggatgatcattgacatcatcaaattcttcttcgtctatatgcttgtgttattt
gccttcgcatgcggtctaaaccagctgatgtggtactacgctgagcttgagaagcataag
tgctatcaccattcatccgttattcctgactttgatactcaagaaagagcttgtagtatt
tggagacgatttgcaaacttattcgaaacatctcaatcactcttctgggcttctttcggt
ttggtcgacttaacaacgtttgagctgaccggtatcaagagcttcaccagattctgggcg
ctcctgaccttcggctcgtactccgttatcaacatcattgtactcctgaacatgcttatc
gctatgatgtctaactcttatcagatcatttccgaaaggtccgatacggaatggaaattc
gctcgaagcaacctctggatgtcgtactttgaagacggcgatacagttccgcccccgttt
aacatcatccccactccaaaacacgtgaacggctggatacaaaaggttttccataataaa
gaaagaggatctataattaacaaatcacgtgagaaggcccgtcaacaacacgaagctatc
atgcgtatcttggttagacgatacgtaaccgcggaacaacgagccagagatgaagtcgga
gtgacggaggacgacgttatggaaatcaggcaggatatatcaacgctgcgcttcgagtta
atagatattttagcaaacaacggaatgaagacgccgaggatcaactctcaggaaaccaca
atatcgggcaagaaaggtaaagtgatggagaggaggatcctgaaggacttccacattggc
atcgtggaaggaatcataaaggatgtgatatcgaaggagagcaagcctaaggacgtcttc
agtcagatcgcaaaagctatcgtaagacgaggaagtgaaaacgataagaagaaagactgg
aatgccaaagtgcgcagaagcacaatacgacgagaccccatcggaacaactgctgaagct
gcaacaaagaagagcagacaatccctgagagctcatatcttggacaacgtgtcagctagg
actattgatcctcaaaaactcttgcaatacaatccaaacctatcttcggtgacaccgacg
gctcgcgtcgcgtacgctaagttcatgaggagcaagatcaagtctgacttcactgagacg
gagagcaagccagatggtgaagaaggtgccgcaggagaagcatccgaggctaaagagtcc
ggatctcaaggagctgcacctaaagaattaaagaaagaaaaaccagaagataaaaacgta
gaagcaaagaaaataaaagtagaagctgatatcgaaaataaaggttctcaagctaagacc
gaagagcaaaaacaaacaaagccttcgcctcaagaaccgtctaaatctggtgacacatca
gcatctaagcccgataaggaaaccacacctcagaaaaagggcgaatcaaaagaccatgtg
attcaaatagaagaaccagaatcaccaaccagtagtctatacatgacaaaggaagaagat
aagaatctacaaaaacctatctcacctacaccgagtggaccttcagagcaaattctatca
gcatctacattagaatcagatcaacagaaggactcaaaaactccatctgttacgattacg
gttgaagaaccaaaagatgataaaccgaaggaacctaagaagaaagaaccaaagcccaag
gaaagtccaggaccttccaagctgagtccctcaccaggtccaccgaaaccaggaatagtg
acggataaagggaagtctaaagtaactggtaaaatagtttcgggatggctttag
DBGET
integrated database retrieval system
