Vanessa cardui (painted lady): 124540513
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Entry
124540513 CDS
T09161
Name
(RefSeq) pumilio homolog 2 isoform X1
KO
K17943
pumilio RNA-binding family
Organism
vcd
Vanessa cardui (painted lady)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PUF
PUF_NOP9
Nitroreductase
NS1_C
Motif
Other DBs
NCBI-GeneID:
124540513
NCBI-ProteinID:
XP_046974096
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Position
2:11334225..11403880
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AA seq
1245 aa
AA seq
DB search
MLEPHGSPMKWPGTGGDEEAGEAALQTARVAQTRAQDDAAVHYVFQRESQEAELSSLAPK
QRWAVGDDSIAENQDKWKNPTPITMNNIQQGPVQLKNSQTNQQQYINQAIASSVGTLAIN
PSVIGSHPAHLTTNMVHTQLAPLQNHTLGNNLTIQNNTMMLPPLQGIQNAPQLGQQGLYD
IHQHPGNPIQAMNGIGKSAEHLMYLSQAGMLAPGTNQFLQQGQNQLGLTPVATIRNQIAP
AAKKLWDKGPGAGGDSKGPPHLPPLQLNPEQMWRDPTWSAQAVEHNVGVPMMGTRRGVAF
LGGDASSILSPRDSAGLGVKMVEYVLRGSPTEGGGVAGGGEKVAGVVSGLRGMVLEERAD
DKAGSPFDKDLHEMHDHAPMPNGLHNGQEDDKAFNRTPGSRQPSPAEEEGGAGAGGVVGV
NAGVGGVVGAVRNGDAAAFPLLPPHALPAPQPQPLHHMPHLQHPQHHPGMLGVAPLQGLP
HPQHPQIHPGMTLNDSMNQHIELVLQMEQHPQFDNNSFASTQQYAGGVGGVGGVGGVGGV
GGVGGVGVGAVGGASSGVGGAGLVNGASVVQPAPDSQHHQPFELQQLFRSQQAAAAGGQA
AAAQLQLLQQQQQQQFQLQQQLAAQQAFTQAPYVINAGQEGAPYVSALIAGVPPYYGVAA
PWGVYPGLVAQPAQQQAQQPRRPLTPQQGEQQVNGQGQYVIPYYDPGSLVMGGRNGTPLR
LVSPGGVLAPRQYPPAPAHPASTPGPPTSAQPQQQQPGGGGAMATRRDSLEFGGGGAVAL
QEYARKWGPSPLSPPLGAALGPVGLRPVSAAPGAETAKYRAVSSLAQGLTSNGGMFGSSS
SLLSKLSGVGTISELVGGGVGGVGVGVGVGVGVGVGSVGALVAGDKPAAGRSRLLEDFRN
NRFPNLQLRDLANHIVEFSQDQHGSRFIQQKLERATVQEKLMVFNEIIGAAYSLMTDVFG
NYVIQKFFEFGTTEQKTTLAQKVRGHVLALALQMYGCRVIQKALESIPAEQQQEVVRELD
GHVLKCVKDQNGNHVVQKCIECVEPTALQFIINAFAGQVFALSTHPYGCRVIQRILEHCT
PEQTAPVLGELHAHTDQLIQDQYGNYVVQHVLEHGAAEDRSRLVAAVRGKVLQLSQHKFA
SNVVEKCVSHATRNERALLIDELCGFNDNALHVMMKDQYANYVVQKMIDVAEPTQRKVLM
HKIRPHIGSLRKYTYGKHIIAKLEKFFMKAPELGPIGPPQPNPVL
NT seq
3738 nt
NT seq
+upstream
nt +downstream
nt
atgctcgagcctcacggtagcccaatgaagtggccgggcactggtggagacgaagaggcg
ggtgaagcagcgttgcagacagcgcgagtggctcagactcgcgcccaagacgacgccgcc
gttcattatgtgttccagcgcgaatcccaggaagcagaattatcctcattagcaccgaaa
caacgttgggctgtcggtgacgactctattgcggagaatcaagataaatggaagaatcct
actccgataacaatgaataatattcaacaaggcccagtgcaattaaagaactctcagact
aatcagcagcagtacattaaccaggcaatagcctcatctgtcggtactttggccattaat
ccttctgtaattggaagtcatccagcacatttgaccacaaacatggtccacacacagttg
gcaccattacaaaaccatacattgggtaataatttaacaatacagaacaatactatgatg
ctcccacctctccaaggcatacaaaatgctcctcagctaggacaacaaggtttatatgac
atacatcagcatccagggaacccaatacaggctatgaatggcattggcaagagtgctgaa
catcttatgtacttaagccaagcaggtatgcttgcacctggaacaaatcagtttctacag
caaggacaaaaccaattgggactaacaccagtcgctactatcagaaatcagattgcacct
gctgcaaaaaaattgtgggacaaagggcccggtgctggaggtgatagcaaaggcccacct
catctgcctcccttgcaactaaatcccgaacaaatgtggcgagatcccacttggtctgct
caagcagtggaacacaacgtgggcgttccgatgatgggcacgcggcgcggcgtcgccttc
ctcggaggcgacgccagcagcatcctctccccgcgcgactccgccggcctcggcgtcaag
atggtcgagtacgtgctgcgtggatcacccacagagggtggcggagtggcgggtggcggc
gagaaggtggcgggcgtggtgtcggggctgcgcggcatggtgctggaggagcgcgccgac
gacaaggcgggctcgcccttcgacaaggacctgcacgagatgcacgaccacgcgcccatg
cccaacgggctgcacaacggccaggaggacgacaaggccttcaatcgcacgccgggctcg
cggcagccgtcgcccgccgaggaggagggcggcgcgggcgcgggcggcgtggtgggcgtc
aacgcgggcgtgggcggcgtggtgggcgccgtgcgcaacggcgacgcggccgcgttcccg
ctgctgccgccgcacgcgctgcccgcgccgcagccgcagccgctgcaccacatgccgcat
ctgcagcacccgcagcaccaccctggaatgcttggtgttgcgccacttcaaggattaccg
catcctcagcacccacaaatacatccaggaatgacactcaacgactcaatgaatcaacac
atcgaactcgttttgcaaatggaacagcatccgcaatttgacaacaacagttttgctagc
acgcaacagtacgcgggtggcgttggcggcgtgggcggcgtgggcggagtgggaggcgtg
ggaggcgtgggcggcgtgggcgtgggcgcggtgggcggcgccagcagcggcgtgggcggc
gccggcctcgtcaacggagcgtccgtcgtgcagccggcgccggactcgcagcaccaccag
cccttcgagctgcagcaacttttccgatcacaacaagcggcggcggctggcggtcaagcg
gctgcggcgcagcttcaactgttgcaacaacagcaacaacaacaattccagctgcaacag
caacttgccgcccaacaggctttcacacaagcgccgtatgtgataaacgcgggccaggag
ggcgcgccgtacgtgagtgcattgatcgctggcgtacctccgtactacggcgtagcggcc
ccatggggcgtgtacccaggactagtcgcacagccggcgcagcagcaagctcagcaaccg
cgccggccgctgaccccacagcagggcgaacagcaagtgaacgggcagggacaatacgtg
atcccatattacgatccgggatctctagtgatgggtggccgtaacggtacgccgctgcgt
ttggtgtcacccggcggtgtgctggcgccgcgacagtaccctcccgcgcccgcacacccc
gcctctacgcccggaccgcccacttccgctcagccccagcaacagcaacctggcggagga
ggcgccatggcgacgcggcgcgactcgctcgagttcggcggcgggggggcggtcgcgctg
caggagtacgcgcgcaagtgggggccctcgccgctgtcgccgccgctgggcgccgcgctc
gggcccgtcggcctgcgccccgtgtccgccgcgcccggcgccgagaccgccaagtacaga
gccgtcagcagtttagcacaaggtctaacatcgaatggtggaatgttcggatcatcatca
tcgttattgagcaaactcagtggagtcggaactatctcagaactggtaggaggcggtgtg
ggcggtgtaggtgtcggcgtgggcgtaggggtgggcgtgggcgtgggctcagtgggcgcc
ctggtggcaggggacaaaccagccgcgggacgctcgcgcctcctggaagacttccgcaac
aatcgtttccccaacctacagctccgggacctcgccaatcacattgtagagttctcgcag
gaccagcacgggtccagatttatacaacaaaaactggagagagcgacagtccaagaaaaa
ctaatggtatttaatgaaattattggagccgcctacagcctcatgacagacgtcttcgga
aattatgtaatccagaagttttttgagttcggcacaacggaacagaaaacaacattagcg
caaaaggtgcgcggacacgtgctggcgctggcgctgcagatgtacggctgccgcgtgata
cagaaggcgctggagtcgattcccgccgagcagcagcaggaggtggtccgcgagctggac
gggcacgtgctcaagtgtgtcaaagaccagaacggaaaccacgtcgtacaaaaatgcata
gaatgcgtcgaaccgacggcgctgcagttcataatcaatgcgttcgcgggtcaagtgttt
gctctgtcgacgcacccgtacggctgccgcgtgatccagcgcatcctcgagcactgcacg
cccgagcagacggcgcccgtgctcggcgagctgcacgcgcacaccgaccagctcatacag
gaccagtacggcaactacgtggtgcagcacgtgctggagcacggcgcggccgaggaccgt
tcgcgcctggtggcggccgtgcgcgggaaggtgctccagctgtcgcagcacaagttcgcc
tccaacgtggtggagaagtgcgtctcgcacgccacgcgcaacgagcgcgctctgctcatc
gacgagctgtgcggcttcaacgacaatgctctccatgtgatgatgaaggatcaatacgcc
aattacgtagttcagaagatgatagacgtagcggagccgacgcagcgcaaagttttaatg
cacaagattcgaccgcacatcgggtcgctgcgcaagtacacgtacggcaagcacatcatc
gccaaactggagaaattcttcatgaaggcgccggaactgggacccatcgggccgccccag
cccaatcctgtcctgtag
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