Vibrio cholerae O1 El Tor FJ147: IR04_09500
Help
Entry
IR04_09500 CDS
T03827
Name
(GenBank) chemotaxis protein
KO
K10961
toxin coregulated pilus biosynthesis protein I
Organism
vcf
Vibrio cholerae O1 El Tor FJ147
Pathway
vcf05111
Biofilm formation - Vibrio cholerae
Module
vcf_M00852
Vibrio cholerae pathogenicity signature, toxin coregulated pilus
Brite
KEGG Orthology (KO) [BR:
vcf00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
IR04_09500
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
vcf02044
]
IR04_09500
Secretion system [BR:
vcf02044
]
Type II secretion system
Toxin co-regulated pilus biosynthesis protein
IR04_09500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MCPsignal
dCache_1
HAMP
MCP-like_PDC_1
Motif
Other DBs
NCBI-ProteinID:
AJZ99373
LinkDB
All DBs
Position
I:complement(969980..971842)
Genome browser
AA seq
620 aa
AA seq
DB search
MIKKIISVFLLLACIITLAFTAFFYHSKLSDQTKSISSLSSQQAQERLQSYQDSLDFYKK
LNTSLSVAIANSLRDKAVEELNAIALRIQENHGFIGVTFASLDGTMFTDIGTLDWNAKTL
RRDWFVKTVELGTKHYTAFDIDKTTGQHVLTIATPVYVGNDIVGSVALDIAGDQIASPNG
SGMFMMTDRNFNVFASDLTHSTLIGKDLTKEKPLFKNLVSGQYVTFSDADSHWFAVSQTE
IDGENKLFTIIDIQQIVQTYKRDIQLIIAGFSGFSCVMLIGLYWVLSKELSGVRQIREWI
LALSDGQIKERRPIKFHNELDTIAQSLENLQFRLLDVVRNSHRTMNDLSIKQTDITYSIE
GNTNNSQQELGLIEQVATATTQLSCTSFDVMQQAQSAELNAETAQKLIAESHDIIDSSSK
QTEMVTLSIHESQQIINQLREFSDNISSVTDVINNISDQTNLLALNAAIEAARAGEQGRG
FAVVADEVRSLAVKTQQSTIDIQGIILKLQEQSQLADQVMTRNVSLIHETQVANRALIAS
FNLISDKVLEISNINSIVSTAANEQKIVTEDVAKQMEDIRYLVQENLSAMERTKQANQNI
SDLTTNLNDALSFFKIELTS
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atgataaaaaaaataatttcggtttttttattacttgcgtgcatcattacgttggctttt
actgcctttttctatcactcgaaactatcagatcaaacaaaatctatatctagccttagt
tctcagcaggcacaagaacggttgcaaagttatcaggattctttagatttttataaaaaa
cttaatacctctctctcagttgcaatagccaattcacttcgcgataaagcagtcgaagaa
ctcaacgctattgctttgcgtatacaggaaaatcatgggtttattggtgttaccttcgct
agtttagatggcaccatgtttacagatattggtactctagattggaatgcaaagacattg
agaagagattggtttgttaaaacggtcgaactcggtactaaacattacacagcttttgat
atcgataaaacaactgggcaacacgttctcactattgccacccctgtttatgtaggcaac
gacattgtcggcagtgtcgctttagatattgcaggtgatcagattgcctcacctaacggc
agtgggatgtttatgatgacggataggaattttaatgtatttgcatctgatctcactcac
agtaccttaattggaaaagatttaacgaaagagaagcctctgttcaaaaatctggtctca
ggccagtatgtcaccttcagtgatgctgatagtcattggtttgcagtgtcacaaacagaa
atagatggtgaaaataaactgttcactattattgatattcaacaaatcgtccaaacatac
aagcgagatatccagttgattattgctggatttagtggtttttcatgcgtgatgctaatt
ggactatattgggttctaagcaaagaactctcaggagttagacagatcagagaatggatt
cttgccctttctgatggtcagataaaagaacgcaggcctataaaattccataacgagctc
gacactattgcccaaagtcttgaaaatttacaatttaggcttcttgatgtggtgagaaat
tctcatcggactatgaatgatttaagtatcaaacagactgacattacgtattcaattgaa
gggaatacgaataattcacagcaagaacttgggctcattgaacaagtggccacagcaaca
acgcaactatcatgtacttcttttgatgtaatgcaacaagctcaaagtgcagagcttaat
gcggagacggcccaaaaattgattgctgaaagtcatgatattatcgattcatcaagcaaa
caaaccgaaatggtaaccctatcgatccatgaatcccaacaaataatcaatcagttacgc
gagttttccgataatattagttcggttacggatgtcattaataatatatcagatcaaact
aacttacttgccctaaatgcagctatcgaggctgctcgtgcaggtgaacaggggcgcgga
tttgctgtagtagcggatgaggttcgttctcttgcagtgaaaactcagcaatcgactata
gatattcaaggtattattttgaaactgcaagagcaatcgcagttggcagatcaagtgatg
acacgtaatgtttcacttattcatgaaacacaagttgccaatcgggcacttatcgcatcc
tttaacctgatttctgataaggttcttgaaatatcaaacataaactccatcgtttcgact
gccgcaaatgaacaaaaaatagtaactgaagatgtagcaaaacagatggaagatattcga
tatctagttcaagagaatttatccgcgatggaacgaactaaacaggcaaatcagaatatc
tctgatttgaccaccaatctaaatgatgctcttagcttttttaaaattgagcttacttca
taa
DBGET
integrated database retrieval system
