Vibrio cholerae O1 El Tor FJ147: IR04_10115
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Entry
IR04_10115 CDS
T03827
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
vcf
Vibrio cholerae O1 El Tor FJ147
Pathway
vcf03030
DNA replication
vcf03430
Mismatch repair
vcf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vcf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
IR04_10115 (holA)
03430 Mismatch repair
IR04_10115 (holA)
03440 Homologous recombination
IR04_10115 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vcf03032
]
IR04_10115 (holA)
03400 DNA repair and recombination proteins [BR:
vcf03400
]
IR04_10115 (holA)
Enzymes [BR:
vcf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
IR04_10115 (holA)
DNA replication proteins [BR:
vcf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
IR04_10115 (holA)
DNA repair and recombination proteins [BR:
vcf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
IR04_10115 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delt_C
DNA_pol3_delta_C
Motif
Other DBs
NCBI-ProteinID:
AJZ99487
LinkDB
All DBs
Position
I:complement(1100270..1101298)
Genome browser
AA seq
342 aa
AA seq
DB search
MRIYAEKLAESLHKTLYPIYLVFGNEPLLLQEAKTAIEKTAQAQGFLEKHRFSADAGLDW
NAVYDCCQALSLFSSRQLIEIEIPESGVNAQTAKELSALVGQLHQDILLLVIGPKLTKAQ
ENAAWFKTLAQQACWVNCLTPELSRLPQFVQQRCFALGLKPDAEAVQMLAQWHEGNLFAL
AQSLEKLALLYPDGLLTLVRLEESLSRHNHFTPYHWMDALLEGKANRAQRILRQLMLEES
EPIILIRTAQKELTQLLKWQQERQQLGNLGSLFDRYRVWQNRRPLYSAALQRLPSRALLR
LVGILTQAELLAKTQYEQPVWPILQQLSLECCNPQANLPLPH
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatttacgctgaaaaactggctgaatcactgcacaaaacgctctatccgatttac
ctcgtattcggtaatgagccactgctgctccaagaagccaaaaccgccatcgaaaaaacg
gcacaagcgcaaggttttttggaaaaacaccgatttagcgcggatgccgggctcgattgg
aacgcggtgtatgactgttgccaagcactgagtctgttttcatctcgccaacttatcgaa
attgagatcccagaatctggggtcaatgctcaaacggcaaaggaacttagcgcactggta
ggccaacttcaccaagacattctcttgctggtgattggccccaaactgactaaggcgcaa
gagaacgcagcttggttcaaaacgcttgcgcagcaagcctgttgggttaactgcctcacg
ccagaattgagccgtttacctcagtttgttcagcagcgctgttttgccctcggtttaaaa
ccggatgccgaagcggtacaaatgttggcgcagtggcatgaaggtaatctctttgcatta
gcccagagtctcgaaaaattagcgttactctaccccgatggtctactgactttagtgcgc
ttggaagagtcgctgagccgccataaccatttcacgccttatcactggatggatgcgcta
ttagaaggcaaagccaaccgtgctcagcgtattttgcgccagcttatgctcgaagagagt
gagccgattattctgatccgcaccgcgcaaaaagagctgacccaactgcttaaatggcaa
caagagcgccaacagctgggtaatttggggagtctttttgatcgctatcgtgtctggcag
aatcgaagaccactctactctgccgctttacagcgcttaccaagtcgcgccctacttcgg
ttggttggaatattaactcaggctgaattactggcaaaaacgcaatacgaacagccagta
tggccaatcttgcagcaactaagccttgaatgctgcaatcctcaggcaaacctacctttg
cctcactaa
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