KEGG   Vibrio cholerae O1 El Tor FJ147: IR04_16490
Entry
IR04_16490        CDS       T03827                                 
Symbol
ribD
Name
(GenBank) 5-amino-6-(5-phosphoribosylamino)uracil reductase
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
vcf  Vibrio cholerae O1 El Tor FJ147
Pathway
vcf00740  Riboflavin metabolism
vcf01100  Metabolic pathways
vcf01110  Biosynthesis of secondary metabolites
vcf01240  Biosynthesis of cofactors
vcf02024  Quorum sensing
Module
vcf_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Brite
KEGG Orthology (KO) [BR:vcf00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    IR04_16490 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    IR04_16490 (ribD)
Enzymes [BR:vcf01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     IR04_16490 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     IR04_16490 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam Inv-AAD
Other DBs
NCBI-ProteinID: AKA00688
LinkDB
Position
I:complement(2508615..2509718)
AA seq 367 aa
MPMFTSFDHQMMSRAIELAWRGRFTTSPNPNVGCVITRGEQIVGEGFHFRAGEPHAEVHA
MRQAGELTRGATAYVTLEPCSHYGRTPPCAEGLIKAGVAKVICAMQDPNPQVAGKGVQML
RDAGIEVEVGLLEADARVLNRGFLKRMETGMPFVQLKMAASLDGQTALANGKSQWITSPA
ARKDVQRFRAQASAILSTSQTVLADNASLAVRWYDLPSSVQAQYAEADLRQPLRVILDRQ
HQLHPELALYQTPSPVLRVASENAELCISAENGKLDLRELLALLAQQHNVNQLWVEAGSQ
LAQSLIEQKLVDEIILYLAPKLMGSDGRGLFGALGLTEMAEAIELKIEDCRMVGADLRII
ATPKTKD
NT seq 1104 nt   +upstreamnt  +downstreamnt
atgcctatgtttacctcttttgatcatcaaatgatgtctcgcgcgattgaacttgcgtgg
cgcgggcgttttaccacttctcctaatcctaatgtcggctgcgtgatcactcgcggtgag
cagattgtaggggaaggtttccattttcgcgcgggcgaaccccatgctgaagtgcatgct
atgcgccaagccggtgagcttactcgcggtgcgaccgcttatgtcactttagagccttgc
tctcattatggtcgcacaccgccttgtgctgaagggcttattaaagccggggttgcgaaa
gtgatttgcgcaatgcaagaccctaacccacaagtggcggggaagggcgtacaaatgctg
cgtgatgccgggattgaggttgaagtggggttgctggaagcggatgctcgagtactcaac
cgcggttttctaaaacgtatggaaaccggcatgccttttgtgcagcttaaaatggcggcg
agtctcgatggacaaaccgcgctcgctaacggtaaaagccagtggattacctctcctgca
gcacgtaaagatgttcagcggtttcgcgcgcaagccagtgcgattctctccaccagtcaa
acggtgctggcggataatgcttctctggcggtgcgttggtacgatttaccgtcatcggta
caggcgcaatacgcagaagcggatttgcgtcagccactgcgggtgattttggatcgtcaa
catcaattgcatccagagttagcgttataccaaacaccttcacccgtgctgcgagttgcc
agcgagaatgccgaactctgtatctctgctgagaacggaaagcttgatttgcgtgagctt
ttggcactactcgctcagcaacacaatgtgaatcaactctgggtagaggcggggagccaa
ctggctcaatctttgattgagcaaaagttggtggatgaaatcattctctatttagcgccg
aaactgatgggcagtgatggccgtggtttatttggcgcgctcggtttgacggaaatggct
gaggccattgaactcaaaatagaagattgtcgaatggtgggggcagatttgcggatcatc
gccaccccaaaaacaaaagattag

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