Vibrio cholerae O1 El Tor FJ147: IR04_18255
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Entry
IR04_18255 CDS
T03827
Name
(GenBank) penicillin-sensitive transpeptidase
KO
K05366
penicillin-binding protein 1A [EC:
2.4.99.28
3.4.16.4
]
Organism
vcf
Vibrio cholerae O1 El Tor FJ147
Pathway
vcf00550
Peptidoglycan biosynthesis
vcf01100
Metabolic pathways
vcf01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
vcf00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
IR04_18255
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
IR04_18255
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
vcf01003
]
IR04_18255
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
vcf01011
]
IR04_18255
Enzymes [BR:
vcf01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
IR04_18255
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
IR04_18255
Glycosyltransferases [BR:
vcf01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
IR04_18255
Peptidoglycan biosynthesis and degradation proteins [BR:
vcf01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
IR04_18255
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
PCB_OB
Transpeptidase
Motif
Other DBs
NCBI-ProteinID:
AKA01023
LinkDB
All DBs
Position
I:2890350..2892827
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AA seq
825 aa
AA seq
DB search
MKFIKRLLVFSLICIILGVTTIFGFYFYVKSDLPDVATLRDVQLQTPMQVFSQDGKLIAQ
FGEKRRIPLKLEEMPKELIEAVIATEDSRYYEHYGFDPIGITRAAFAVLASGSASQGAST
ITQQLARNFFLSNEKKVMRKVKEIFIAIHIEQLLSKQEILELYLNKIYLGYRSYGVGAAA
QAYFGKEVKDLTLGEIALIAGLPKAPSTMNPIYSVERATNRRNVVLQRMLDEKYITKAEY
DAARAEPVLPKYHGAEIELNAPYVAEIARAWMVERYGEEAAYTSGMNVYTTVDSKLQRAA
NQAAINNLLAYDERHGYRGAEKELWQVNQPAWSSTQLSEYLSNEPTYGDMFPAAVLSVEE
KSAQVWVKSYGVQTIAWEDMNWARRFINDDRQGPLPKSANEFLAAGQQIWVRPRTQDGAI
TAWKLTQVPNANTAFVAMNPENGAVTALVGGFNFVHNKFNRATQSVRQVGSSIKPFIYSA
ALNKGLTLATLINDAPINQWDESQGTAWRPKNSPPTYTGPTRLRIGLAQSKNVMAVRVLR
EVGLDETREYLTRFGFKLDQLPRSETIALGAGSLTPVQMAQGFSVFANNGYFVEPFYISR
VENPFGNIEFSAEPKVVCHRECSSELDEFAEQDAASPYAPKVISEQNAFLTREMLYSNIW
GGGEWSSDTGWNGTGWRAQALKRRDIGGKTGTTNDSKDAWYNGYAPGIVGVAWVGFDDHS
RNLGKTAPNRNIEDDVSGAESGGKTALPAWVEFMSLALQDVPVQQKAVPNNIARVRIDRD
TGLLTNKLDSSSMFEYFEAGTEPTEYVSEHVNESIYSTSSGEELF
NT seq
2478 nt
NT seq
+upstream
nt +downstream
nt
gtgaagttcataaagcgtttattagtattttcattgatttgcattattcttggagtcact
acaatctttggtttctatttttatgtgaaatcagatctgccagatgtagccactctacgt
gatgtccaattacaaactccgatgcaagtcttcagtcaagacggcaaactgatcgcccaa
tttggtgaaaagcgccgcatcccgctcaagctggaagaaatgcctaaagagttgatcgaa
gcggtgattgcgaccgaagactctcgctactacgagcactacggttttgacccgattggt
atcacgcgtgccgcctttgctgtactcgcctcgggcagtgcttcgcaaggtgccagtacc
attactcagcagcttgcgcgtaactttttcctctctaatgagaagaaggtgatgcgtaaa
gtcaaagagatcttcattgcgatccatattgagcaactgttaagcaagcaagagatctta
gagctgtatctcaacaaaatttacctcggctaccgttcttatggcgtcggcgcggctgcg
caagcgtatttcggcaaagaggtgaaagatctgaccttaggtgaaattgcgctgattgca
ggcctaccaaaagccccttcaaccatgaaccctatctattccgtcgagcgtgcgaccaac
cgtcgtaatgtggtgctgcagcgtatgctggatgaaaaatacatcactaaagcagaatac
gatgctgcgcgtgccgaacctgtgctgccgaaataccatggcgcagagattgagttaaac
gcaccgtatgtggctgaaattgctcgcgcatggatggttgaacgctacggtgaagaagct
gcttacacgtcaggcatgaatgtctacacaacggtcgactctaagttgcaaagagccgcc
aaccaagccgcgatcaataacctgttggcttacgatgagcgtcacggttatcgcggtgca
gaaaaagagttgtggcaagtcaatcaaccggcttggagcagcactcagctgtctgaatac
ctgagcaatgaacctacctatggcgatatgttccctgccgcggttctcagcgttgaagaa
aaatcggcccaagtgtgggtaaaaagctatggtgtgcaaaccatcgcttgggaagacatg
aattgggcgcgccgttttatcaacgacgatcgccaaggcccacttccgaaaagtgccaat
gaatttttagccgcaggacagcaaatttgggttcgtccacgcacccaagatggcgcgatt
accgcttggaagctaactcaagttccgaatgccaacaccgcatttgtcgcgatgaatcca
gaaaacggcgcggtcactgcgttggttggtggttttaactttgtgcacaacaaatttaac
cgagctacccagtcagtgcgtcaagtgggttcaagtatcaaaccatttatctattctgcg
gcactgaataaaggactcactttagccacgctgattaatgatgcgccgattaaccaatgg
gatgagagtcaaggcacggcatggcgtccgaagaactcaccaccaacctacaccggccca
acacgactgagaattggtttagcccaatcgaaaaacgtcatggccgtgcgcgttttgcgt
gaagtgggtttggatgaaacacgcgaatacttaactcgctttggtttcaaattagatcag
ttaccgcgctctgagacgattgcgctcggtgcaggcagcttgactcctgtacaaatggca
caaggcttctcggtttttgctaacaatggttacttcgttgaacctttctacatcagccgc
gtcgaaaatccatttggcaacattgagtttagcgcagagccgaaagtcgtctgccaccgt
gaatgctcatcggaacttgatgagtttgccgagcaagacgcagcaagcccttatgccccg
aaagtgatttccgagcaaaacgctttcttaacgcgtgaaatgctgtacagcaatatttgg
ggtggcggtgagtggagctcagataccggttggaacggtacaggctggcgagcacaggca
ctgaaacgccgcgacatcggtggtaaaaccggtaccaccaacgactcaaaagatgcatgg
tacaacggttatgccccaggcatcgttggtgtggcttgggtgggctttgatgatcatagc
cgtaacctagggaaaacagcgccgaatagaaacattgaagatgatgtttccggtgccgaa
tcgggtggtaaaaccgccttgccagcttgggttgagtttatgtctctcgcgctacaagat
gtgcccgttcaacagaaagcggtaccgaacaatatcgctcgtgttcgcattgaccgcgat
acggggttactgaccaacaaactcgactccagctcgatgtttgagtatttcgaagccggc
actgagccgacagagtacgtcagcgaacatgtcaatgagtccatctattcgaccagctct
ggtgaagagctgttctag
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