KEGG   Vibrio cholerae O1 El Tor N16961: VC_0916
Entry
VC_0916           CDS       T00034                                 
Name
(GenBank) phosphotyrosine protein phosphatase
  KO
K20945  tyrosine-protein phosphatase [EC:3.1.3.48]
Organism
vch  Vibrio cholerae O1 El Tor N16961
Pathway
vch05111  Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:vch00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   05111 Biofilm formation - Vibrio cholerae
    VC_0916
Enzymes [BR:vch01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.3  Phosphoric-monoester hydrolases
    3.1.3.48  protein-tyrosine-phosphatase
     VC_0916
SSDB
Motif
Pfam: LMWPc
Other DBs
NCBI-ProteinID: AAF94078
UniProt: Q9KTI6
Structure
LinkDB
Position
I:978644..979144
AA seq 166 aa
MKVKGLSVLVVCTGNLCRSPMAEIILRDKIRQKRLNIQVRSAGTLKTGKTMPDDKALQAL
QDYGYHPMVNPVQQVTQQDFIEHDFIYAMDRTNLADLLDICPAEHKNKLALFLSKANRQE
KEVPDPYRRSSEFFQRTALLIESGAVALVDSWQEQGINACNENLSQ
NT seq 501 nt   +upstreamnt  +downstreamnt
atgaaggttaaaggtttatcagtattagtcgtgtgtacaggtaatttgtgtcgttcgcca
atggcagagattattttacgcgataagattcggcaaaaacgcttgaatatccaagtgcgt
agtgctggcacgctaaagacaggaaaaacaatgcctgatgataaagcgttacaagcgtta
caggattatgggtatcaccctatggtcaacccagtccagcaagtgactcaacaagacttt
atcgagcatgattttatctatgcaatggataggaccaatcttgctgatttactcgatatt
tgtcctgctgagcataaaaacaagctggctctttttcttagcaaggcgaatcgacaagaa
aaagaagtacccgatccttatcggcgtagtagtgaatttttccaacgtacagctttgttg
attgaatctggagcggtggctttggttgattcttggcaagagcaggggataaatgcgtgc
aacgaaaatttatctcaataa

KEGG   Vibrio cholerae O1 El Tor N16961: VC_0917
Entry
VC_0917           CDS       T00034                                 
Name
(GenBank) UDP-N-acetylglucosamine 2-epimerase
  KO
K01791  UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
Organism
vch  Vibrio cholerae O1 El Tor N16961
Pathway
vch00520  Amino sugar and nucleotide sugar metabolism
vch00541  Biosynthesis of various nucleotide sugars
vch01100  Metabolic pathways
vch01250  Biosynthesis of nucleotide sugars
vch02020  Two-component system
vch05111  Biofilm formation - Vibrio cholerae
Module
vch_M01014  UDP-ManNAcA biosynthesis, UDP-GlcNAc => UDP-ManNAcA
Brite
KEGG Orthology (KO) [BR:vch00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00520 Amino sugar and nucleotide sugar metabolism
    VC_0917
   00541 Biosynthesis of various nucleotide sugars
    VC_0917
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    VC_0917
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   05111 Biofilm formation - Vibrio cholerae
    VC_0917
Enzymes [BR:vch01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.3  Acting on carbohydrates and derivatives
    5.1.3.14  UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing)
     VC_0917
SSDB
Motif
Pfam: Epimerase_2 MmgE_PrpD_N Glyco_transf_4 Glyco_trans_4_4
Other DBs
NCBI-ProteinID: AAF94079
UniProt: Q9KTI5
Structure
LinkDB
Position
I:979457..980575
AA seq 372 aa
MKKVLIVFGTRPEAIKMAPLVQQLCQDNRFVAKVCVTGQHREMLDQVLELFSITPDFDLN
IMEPGQTLNGVTSKILLGMQQVLSSEQPDVVLVHGDTATTFAASLAAYYQQIPVGHVEAG
LRTGNIYSPWPEEGNRKLTAALTQYHFAPTDTSRANLLQENYNAENIFVTGNTVIDALLA
VREKIHTDMDLQATLESQFPMLDASKKLILVTGHRRESFGGGFERICQALITTAEQHPEC
QILYPVHLNPNVREPVNKLLKGVSNIVLIEPQQYLPFVYLMDRAHIILTDSGGIQEEAPS
LGKPVLVMRETTERPEAVAAGTVKLVGTNQQQICDALSLLLTDPQAYQAMSQAHNPYGDG
KACQRIADILAK
NT seq 1119 nt   +upstreamnt  +downstreamnt
gtgaaaaaagttctcatcgtatttggtacgcgcccagaggcaatcaaaatggcacctctg
gtgcagcaactctgtcaagacaatcgttttgtcgccaaggtatgtgtaacgggccaacac
cgtgagatgttagatcaggtattagagctgttttcgattacgcctgattttgatctcaac
atcatggagcctgggcaaacactcaatggcgtgaccagcaaaattttgctcggtatgcag
caagtgttgagtagtgaacagccagatgtggttttagtgcatggtgataccgctaccacg
tttgctgcctctttagccgcgtattatcaacaaattccggtaggtcatgttgaagcgggt
ttgagaacgggcaatatctattccccttggcctgaagagggcaaccgcaaactcacggcc
gcactcacgcagtaccactttgcacctacagatacttcgcgtgccaatctgctgcaagaa
aactacaacgcagagaatattttcgtcactggtaatacggtgattgatgcgttgttggct
gtgcgtgaaaagatccataccgatatggatctgcaagccactctagagagtcagtttcca
atgcttgatgcgagcaaaaagctgattctggtaacaggacaccgccgtgaaagttttggt
ggtggctttgagcgtatttgccaagcgctgatcactaccgcagagcagcatcccgaatgc
caaattttgtatcccgtgcatctcaatccgaatgtgcgtgaaccggtcaataagctccta
aaaggtgtcagcaatattgtcttgattgaaccgcagcagtatttgcctttcgtttacttg
atggatcgcgcacacattattttgactgactctggcggcattcaagaagaggcgccctcg
ctgggtaagccagtgctggtgatgcgtgaaacgactgagcgccctgaagcggtggctgcg
ggcacggtgaaattagtcggtaccaaccaacaacaaatttgtgatgcgttaagcttacta
ctgactgacccacaggcttatcaagccatgagtcaggcacacaacccttatggggatggt
aaagcctgtcaacgtattgcggacattttagcgaaatag

KEGG   Vibrio cholerae O1 El Tor N16961: VC_0918
Entry
VC_0918           CDS       T00034                                 
Name
(GenBank) UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase
  KO
K02472  UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336]
Organism
vch  Vibrio cholerae O1 El Tor N16961
Pathway
vch00541  Biosynthesis of various nucleotide sugars
vch01100  Metabolic pathways
vch01250  Biosynthesis of nucleotide sugars
vch02020  Two-component system
vch05111  Biofilm formation - Vibrio cholerae
Module
vch_M01014  UDP-ManNAcA biosynthesis, UDP-GlcNAc => UDP-ManNAcA
Brite
KEGG Orthology (KO) [BR:vch00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00541 Biosynthesis of various nucleotide sugars
    VC_0918
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    VC_0918
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   05111 Biofilm formation - Vibrio cholerae
    VC_0918
Enzymes [BR:vch01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.336  UDP-N-acetyl-D-mannosamine dehydrogenase
     VC_0918
SSDB
Motif
Pfam: UDPG_MGDP_dh_N UDPG_MGDP_dh UDPG_MGDP_dh_C NAD_binding_2 ApbA 3HCDH_N 2-Hacid_dh_C NAD_Gly3P_dh_N TrkA_N DAO UPF0180 Pyr_redox
Other DBs
NCBI-ProteinID: AAF94080
UniProt: Q9KTI4
LinkDB
Position
I:980595..981836
AA seq 413 aa
MFNKVSVIGLGYIGLPTAAVLASRGLDVVGVDVNAHAVDTINKGEIHIVEPDLDIVVRSA
VMTGKLKATLTAEPADAFLVAVPTPFKGDNHEPDLSYIEAAAKTIAPVLAKGNLVVLEST
SPVGTTEKLAQWLAEARPDLTFPQQKGIAADVKIAYCPERVLPGYVLQELVSNDRVIGGV
SKACSEKAVALYKTFVKGECIVTNARTAEMAKLTENSFRDVNIAFANELSLVCNKLKINV
WELIRLANRHPRVSILNPGPGVGGHCIAVDPWFIVNSCPDEAQLIRTAREVNDGKPHWVV
DQVKQAADQFKKPIIACLGLAFKADIDDLRESPALDITKHLAESKVGQLLAVEPNITELP
SKLAKQGIELVSLERALELANIVVVLVDHKEFKAADKTEFAKKVVIDTRGVVA
NT seq 1242 nt   +upstreamnt  +downstreamnt
atgtttaataaagtttcagtgattggcctaggttatattggtctgccaacagcagccgtt
ttggcctctcgtggtttggatgtggtcggtgttgatgtcaacgcccatgcagtggatacc
atcaacaaaggcgagattcacattgtggagccggatcttgatatcgtggtacgcagtgct
gtcatgaccgggaaactcaaagcgacattaacagctgagcctgccgatgcgtttttggtg
gccgttcctacaccttttaaaggggataaccacgaacctgatcttagctacattgaagcg
gcggcaaaaaccatcgctcccgttcttgctaaagggaacttggtggttctagagagtact
tccccagtaggcacaaccgaaaaattggcgcaatggcttgcagaagcgcgtccggatctg
acgtttcctcagcaaaaaggcatcgctgcggatgtgaagattgcgtactgcccagagcgt
gtgttgccgggttatgtcctacaagagcttgtgagtaatgaccgcgtgattggtggcgtg
agtaaggcttgtagcgaaaaggctgttgccctgtacaaaacctttgtaaaaggtgagtgc
attgtcaccaatgcgcgtacggcggaaatggctaaattaaccgaaaactcattccgtgat
gtcaacattgcctttgccaatgaactctctttggtgtgcaacaaattgaaaatcaatgta
tgggaattgatccgcttagccaaccgccatcctcgtgtgagtattcttaacccaggtcct
ggtgtcggtggccactgtattgcggttgatccgtggtttatcgttaatagttgtccagat
gaagcgcaattgatccgtactgcacgtgaagtcaatgatggcaaacctcattgggttgtg
gatcaagttaaacaagcggctgaccaattcaaaaagccaatcattgcttgcctaggctta
gcgtttaaagcggatattgatgatctgcgtgaaagtccagccttggatatcactaaacat
ctggctgaaagcaaagtgggtcagttgttggcggttgaaccaaatattactgaactacct
agcaaacttgcgaagcaaggtatcgagttggtttctctagagcgcgcgcttgagctcgcc
aatatcgttgtcgtgctggtcgatcacaaagaatttaaagcggcggataaaaccgagttt
gctaagaaagtggtgattgatactcgcggagtggtggcatga

KEGG   Vibrio cholerae O1 El Tor N16961: VC_0919
Entry
VC_0919           CDS       T00034                                 
Name
(GenBank) serine acetyltransferase-related protein
  KO
K00640  serine O-acetyltransferase [EC:2.3.1.30]
Organism
vch  Vibrio cholerae O1 El Tor N16961
Pathway
vch00270  Cysteine and methionine metabolism
vch00543  Exopolysaccharide biosynthesis
vch00920  Sulfur metabolism
vch01100  Metabolic pathways
vch01110  Biosynthesis of secondary metabolites
vch01120  Microbial metabolism in diverse environments
vch01200  Carbon metabolism
vch01230  Biosynthesis of amino acids
vch05111  Biofilm formation - Vibrio cholerae
Module
vch_M00021  Cysteine biosynthesis, serine => cysteine
Brite
KEGG Orthology (KO) [BR:vch00001]
 09100 Metabolism
  09102 Energy metabolism
   00920 Sulfur metabolism
    VC_0919
  09105 Amino acid metabolism
   00270 Cysteine and methionine metabolism
    VC_0919
  09107 Glycan biosynthesis and metabolism
   00543 Exopolysaccharide biosynthesis
    VC_0919
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   05111 Biofilm formation - Vibrio cholerae
    VC_0919
Enzymes [BR:vch01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.1  Transferring groups other than aminoacyl groups
    2.3.1.30  serine O-acetyltransferase
     VC_0919
SSDB
Motif
Pfam: Hexapep GMPPB_C LbH_EIF2B DprA_N Hexapep_2
Other DBs
NCBI-ProteinID: AAF94081
UniProt: Q9KTI3
LinkDB
Position
I:981833..982387
AA seq 184 aa
MSSPWELIKADLYRHTGQVSIGLVVKHLLLNAGFAYMFWFRLCRSKNVLIRTVARLMHRI
LSVRYQIQLPKETQVGPGLYLGHATGVIVNSTAKIGANCNLSPFTVIGSNQGQAATVGDC
VYIGPHVSIVEDITIGDGSIIGAGSVVIRDVPPNSVVVGNPGRVLTRPSHKTYIRHPAPL
ESKS
NT seq 555 nt   +upstreamnt  +downstreamnt
atgagttcaccttgggagctgattaaagctgatctttatcggcatactgggcaggtaagt
attgggttagtcgtaaagcacctactactcaatgcgggtttcgcctacatgttctggttt
cggttatgtcgtagtaagaatgtgttgatccgcactgtagctcgtcttatgcatcgcatt
ctgtcagtgcgttatcagatccaactcccaaaagagactcaagtcggcccggggttatac
ctcgggcatgccactggggtcattgttaatagtaccgctaagattggtgccaattgtaat
ttgagtccctttactgtgattggctcaaatcaaggacaagccgcaacggtaggggactgt
gtatatattggtccgcatgtctcgatcgttgaagatatcacgattggcgatggttctatc
attggtgcggggagcgtcgtcattcgtgatgttcccccaaactcggtagtcgtgggtaac
cccggacgcgtactaacaagaccaagccataaaacctatattcgccaccccgcgccattg
gaaagtaagtcatga

KEGG   Vibrio cholerae O1 El Tor N16961: VC_0920
Entry
VC_0920           CDS       T00034                                 
Name
(GenBank) exopolysaccharide biosynthesis protein EpsF, putative
  KO
K20921  polysaccharide biosynthesis protein VpsD
Organism
vch  Vibrio cholerae O1 El Tor N16961
Pathway
vch00543  Exopolysaccharide biosynthesis
vch05111  Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:vch00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00543 Exopolysaccharide biosynthesis
    VC_0920
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   05111 Biofilm formation - Vibrio cholerae
    VC_0920
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01003 Glycosyltransferases [BR:vch01003]
    VC_0920
Glycosyltransferases [BR:vch01003]
 Polysaccharide
  Bacterial polysaccharide (excluding LPS)
   VC_0920
SSDB
Motif
Pfam: Glycos_transf_1 Glyco_trans_1_4 Glyco_transf_4 GT4-conflict Glyco_trans_4_4 Glyco_trans_1_2
Other DBs
NCBI-ProteinID: AAF94082
UniProt: Q9KTI2
LinkDB
Position
I:982384..983532
AA seq 382 aa
MSKILLIMPLSTLNWGEKNLGGVDSVCQMLVRQLAQQERPYHYRVLAFDPLNNHSYSGEI
IQLSKHLEVVICPLREKRFGLPLPSLLSNWLRIQEQLKDYQPDLVHSHLNSWMMGLGQKT
RNVLTLHSYRKIGRKPVSKLNDFVYEQIIPWVSHFSVDFYTCVGEELRQALSLETNKSIQ
VIGNPVDPDYFSANSANQNLPQNEVNLVTCALITRRKRIDRAIVLLRELKQRGQAATLRI
IGPNMDSAYYAQLQQLIKEYELEQDVIFLGKLNQREIVQQYQQANIGIFTSQQETFGLAP
LEMMAAGLPLISTPVGILGERQATFDQLGVVFMQEGQEAMIAERISQIKITDTQAIQTYL
RDQFAVENVIEHYQNLYREVLS
NT seq 1149 nt   +upstreamnt  +downstreamnt
atgagtaaaatattgcttatcatgccactctctacgctcaattggggggagaaaaatctt
ggtggtgtggattcagtatgccaaatgttggtacgtcaactcgctcagcaagagcgtcca
taccattaccgagtgttagcgtttgatccgctcaacaatcactcttattcaggcgagatt
atccagttgtcaaaacatctggaagtggtgatttgtccgttgcgggaaaagcgatttggg
ctgcctttgcctagcttattatccaattggctccgcatccaagagcaactgaaagactat
cagccagatttggttcactctcatctcaacagttggatgatgggacttgggcagaaaact
cgtaatgtgttgaccttgcattcttatcgcaagattgggcgtaagccagtttcaaaactc
aatgattttgtttatgaacaaatcattccatgggtaagtcatttttccgtcgatttttat
acttgtgttggcgaagagttgcgtcaagcgttatctctggagacgaataagtcaattcaa
gtgattggcaatccagtcgatcctgactatttctctgccaactctgcgaaccagaatctg
ccccagaatgaagtcaatttagtcacttgtgcattgattactcgacgcaagcgtattgat
cgagccattgtattactgcgtgagctaaaacagcgagggcaagcggctactttacgtatt
atcggacccaatatggattctgcttattacgcgcaattgcagcaattgatcaaagagtat
gagcttgaacaagatgtcatttttcttggcaaacttaatcagcgtgaaattgtacaacag
taccaacaagcgaatattggaatatttacgtcacaacaagaaacgttcggcttagcgcca
ttggaaatgatggcggcgggcttgccattaattagtactcctgtcgggattttaggtgaa
cggcaagcaacgtttgaccagttaggggtggtttttatgcaagaagggcaggaagcgatg
attgctgagcgaatcagtcagataaaaataacggatactcaagcgattcaaacctatttg
cgcgatcaattcgcagtagaaaatgtgattgaacattaccagaatctatatcgagaggta
ctgagttga

KEGG   Vibrio cholerae O1 El Tor N16961: VC_0921
Entry
VC_0921           CDS       T00034                                 
Name
(GenBank) polysaccharide export protein, putative
  KO
K20946  polysaccharide biosynthesis protein VpsE
Organism
vch  Vibrio cholerae O1 El Tor N16961
Pathway
vch05111  Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:vch00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   05111 Biofilm formation - Vibrio cholerae
    VC_0921
SSDB
Motif
Pfam: Polysacc_synt_3 Polysacc_synt
Other DBs
NCBI-ProteinID: AAF94083
UniProt: Q9KTI1
LinkDB
Position
I:983529..984938
AA seq 469 aa
MIASLLKYAPVQVFSALSVFALIAVQTRFLSPEHYGVLAVAMVVLELVRAFSAQWLNTSM
LRLYPGYSDREQVQLVQSISLLVIIGSLLGFIVIAATLFIYQQLNWERLLVLSALLSVKS
IFQYQLELSRLNERLSVYRQATVLQSISAVVLSILSLSWAATIESALFALTLSFGIGALC
LGLPQRPKWHIAMLKRLLAYGIPIMLAGGIGVLGGRIDRLFIAHFVGMNETGVYAAQANL
LMGVLGLVFMVISMPLYPNLAKHAEDKIALVSQHKTYLHLLVTLTFPALLGLGILQDEII
RLFLGEQYLSRSSELFWVLAIAVYLINFKGHYLDHGLQFLLQTRKLLWVSLSGLIASIFL
LPLMLNQFGMFGAAITLLIVSGLVAILSFISSWRSGYRYAIGMDGIKVIISALLMGGYLY
LVKQWPLAIHSLFALAFYVTTSLLFYGICLWCLNAFNARQRLFSIWRPN
NT seq 1410 nt   +upstreamnt  +downstreamnt
ttgattgctagtctactcaaatatgctcctgttcaggtcttttccgctctgagtgtcttt
gctctgatcgctgtacaaactcgctttctctctccggaacattatggtgtgttggcggta
gcgatggtggtgctcgaactcgtgcgtgcttttagtgctcagtggctcaacacgtcgatg
ttacgtctttaccctgggtattcagatagggagcaagtccaactcgttcaaagcatttca
ctgctggtcatcatcggatctttgcttggctttattgttattgccgcgactttatttatt
tatcagcaattgaattgggaacgattattggtactgagtgctttattgtcggttaaatcg
atatttcaataccagttagaattaagtcgcttaaatgagcgattgagcgtttatcgtcaa
gcgaccgtattgcagtcaatttcagcggtagtgctctccatcctttcgctctcttgggcg
gcgactattgagtctgcgttatttgctttaaccttgagctttggcattggggctttgtgt
ctgggtttacctcagcggcctaaatggcatattgcaatgttaaagcgtttgcttgcttat
ggtattccgatcatgttggctgggggaattggtgtactgggtggacgaatcgatcgttta
tttatcgctcattttgttgggatgaatgaaaccggtgtttatgctgcgcaagctaactta
ttgatgggggttttggggctcgtttttatggtgatttctatgcctctctaccctaactta
gccaaacatgcggaagataaaatcgctcttgtgagtcagcataaaacctatctgcattta
ctggttacccttacttttccagctttacttggtcttggcatattacaagatgagatcatt
aggctctttttgggtgagcaatatctgagtcgttctagcgaactattctgggtgttagcg
atcgctgtttatctgattaattttaaaggtcattaccttgatcatggtttacagtttcta
ttacagactcgcaagctgctatgggtttctctctcgggcttaatcgcgagcattttccta
ctacctttgatgctcaatcaatttggcatgttcggcgcggctatcaccttgcttatagtg
agtggcttagtcgcaatactctcttttattagctcatggcgatcggggtatcgttatgct
atcggcatggatggcatcaaagtgatcatttcggcactgctgatgggtggctacttatac
ctagtgaaacagtggccattggcgatccattcgttattcgctctagccttttatgtcact
acctcattgttgttttatggtatctgtttgtggtgcttgaatgcttttaatgcacgtcag
cgtttattctcaatctggaggcctaattga

KEGG   Vibrio cholerae O1 El Tor N16961: VC_0922
Entry
VC_0922           CDS       T00034                                 
Name
(GenBank) hypothetical protein
  KO
K20947  polysaccharide biosynthesis protein VpsF
Organism
vch  Vibrio cholerae O1 El Tor N16961
Pathway
vch05111  Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:vch00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   05111 Biofilm formation - Vibrio cholerae
    VC_0922
SSDB
Other DBs
NCBI-ProteinID: AAF94084
UniProt: Q9KTI0
LinkDB
Position
I:984935..986155
AA seq 406 aa
MSERNLNRWMILIILSAFLLGAFLLENMGIQYVSEGGSPILKIHVYSYLTMGIFALLILW
VGLFNLIKPLNELKKAWWLAMVSMLAVILYGFMRFGTSGLAYLIDTIFIPLVLVPIVYGL
SDTAKNRLLALLGYLLFLNACIAIIELILAQSIVAVEIGSFSTFRSTAFLAHPLNNALIT
ASLTPIVMRYTRIPVALYVSVIVLALFAFGGRAALGIFLLGNFLMLLPKLRDFLGQGIRY
HKLKFAYLQALVYFSVIAVILTLVLSPIGERILSKLYLDKSAEARFDVFILLEQLSPSEW
VFGASHGLLSDIAFYIGINVVENYLIGWVLNFGLLGAIGLLLATYTVPVRLIYRQELPAQ
VALLSFMLISLTNNALTVKTPALVLFVVALVCRYRSSDRSLASKSH
NT seq 1221 nt   +upstreamnt  +downstreamnt
ttgagcgaacgtaatctcaatcgatggatgattctgattatcctcagtgcgtttctgttg
ggggcttttttactcgaaaatatgggtattcagtacgtttcagaaggcggaagccccata
ctcaaaattcatgtctattcctatttgactatggggatttttgccctgttgatattatgg
gtaggacttttcaatcttattaagcctttgaatgagcttaaaaaggcatggtggctggcc
atggtatcgatgctggccgttattttatacggctttatgcgattcggtacgtcgggactc
gcttatcttatcgatacgatttttatccctttggttttggttcctattgtatacgggtta
tccgatacagctaaaaatcgattacttgctctactcggctatcttctatttcttaatgct
tgtattgctattattgagcttatattggcgcagagtattgtggcggtagagattggaagt
ttttcaactttccgttcgaccgcctttttggcgcatccactgaacaatgcgctcattacg
gcgtcattaacgccgattgtgatgcgttatacacgaattccggtggctttgtatgtctct
gttatcgtgctagccctgtttgcttttggagggcgagctgcgttggggattttcctattg
gggaattttctgatgctgttgcctaaattacgtgactttttaggccaaggcattcgttac
cataagttgaaattcgcttatctgcaggccttagtctatttctctgtaattgccgttatt
ttgaccctggtgttaagtcctataggtgagcgaatactgtctaaattgtatctcgacaaa
agcgccgaagcgcgattcgatgtttttattttgcttgaacagctttcaccttcggagtgg
gtatttggagcctctcatggattactgagtgatattgccttttatatcgggatcaatgtc
gtggaaaattatttaattggctgggttcttaactttggcttactaggggcgatcggctta
ttactggcaacttacactgttccagtgcgcttgatttaccgacaagaacttcctgctcaa
gttgctttactcagttttatgttgatatcactgactaacaatgcgctaacggtgaagact
cctgcactcgtgttattcgttgtcgctttagtttgtcgttatcgttcatctgatcgttcg
ttggcgagcaagagtcattag

KEGG   Vibrio cholerae O1 El Tor N16961: VC_0923
Entry
VC_0923           CDS       T00034                                 
Name
(GenBank) serine acetyltransferase-related protein
  KO
K00640  serine O-acetyltransferase [EC:2.3.1.30]
Organism
vch  Vibrio cholerae O1 El Tor N16961
Pathway
vch00270  Cysteine and methionine metabolism
vch00543  Exopolysaccharide biosynthesis
vch00920  Sulfur metabolism
vch01100  Metabolic pathways
vch01110  Biosynthesis of secondary metabolites
vch01120  Microbial metabolism in diverse environments
vch01200  Carbon metabolism
vch01230  Biosynthesis of amino acids
vch05111  Biofilm formation - Vibrio cholerae
Module
vch_M00021  Cysteine biosynthesis, serine => cysteine
Brite
KEGG Orthology (KO) [BR:vch00001]
 09100 Metabolism
  09102 Energy metabolism
   00920 Sulfur metabolism
    VC_0923
  09105 Amino acid metabolism
   00270 Cysteine and methionine metabolism
    VC_0923
  09107 Glycan biosynthesis and metabolism
   00543 Exopolysaccharide biosynthesis
    VC_0923
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   05111 Biofilm formation - Vibrio cholerae
    VC_0923
Enzymes [BR:vch01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.1  Transferring groups other than aminoacyl groups
    2.3.1.30  serine O-acetyltransferase
     VC_0923
SSDB
Motif
Pfam: Hexapep LbH_EIF2B GMPPB_C Hexapep_2 LVIVD Hexapep_GlmU
Other DBs
NCBI-ProteinID: AAF94085
UniProt: Q9KTH9
LinkDB
Position
I:986166..986597
AA seq 143 aa
MWLYRVGHFFHKRRIPLLPQVCNGLIRLVHNCAVYSQSEIGKGTVFGYGGIAVVIHKRCV
IGKECVIGSNVTIGGRSRSHNVPVIGNYVYIATGAKVLGDIRVGDGAVIGANAVVLEDVP
PYSVVVGMPAKVIKTNINPKDFY
NT seq 432 nt   +upstreamnt  +downstreamnt
atgtggttgtaccgtgttggccatttcttccataagcgccgcatacctctattacctcag
gtctgtaatggtttgattcgtttggttcataattgtgccgtctatagtcagtctgaaatt
ggtaaagggactgtctttggctatggagggattgcagttgtaattcataagcgctgtgta
atcggtaaagagtgtgtgattgggagtaatgtgactattggtggccgttctcgttcacac
aatgttccagtgatcggtaattatgtctatatcgccactggggcaaaagtactgggtgat
attcgagtcggtgatggagccgtgattggtgcgaatgctgtggtacttgaagatgtcccg
ccttacagcgttgtagtcggaatgcccgccaaagtgatcaaaacaaatattaatcccaag
gacttttactga

KEGG   Vibrio cholerae O1 El Tor N16961: VC_0925
Entry
VC_0925           CDS       T00034                                 
Name
(GenBank) polysaccharide biosynthesis protein, putative
  KO
K20922  polysaccharide biosynthesis protein VpsI
Organism
vch  Vibrio cholerae O1 El Tor N16961
Pathway
vch00543  Exopolysaccharide biosynthesis
vch05111  Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:vch00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00543 Exopolysaccharide biosynthesis
    VC_0925
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   05111 Biofilm formation - Vibrio cholerae
    VC_0925
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01003 Glycosyltransferases [BR:vch01003]
    VC_0925
Glycosyltransferases [BR:vch01003]
 Polysaccharide
  Bacterial polysaccharide (excluding LPS)
   VC_0925
SSDB
Motif
Pfam: Glycos_transf_1 Glyco_trans_1_4 GT4-conflict Glyco_trans_1_2 Glyco_transf_4 Glyco_trans_4_4 ATP-gua_Ptrans
Other DBs
NCBI-ProteinID: AAF94087
UniProt: Q9KTH7
LinkDB
Position
I:987913..989010
AA seq 365 aa
MYHQGCTVRKNINLMIATDLKGQGGVATVVSTYADCGFLEENHIKLIASHSSLDHGQKWR
MTLRFMLALCQLLYCFMRYRVGIVHIHMSSRGSYRRKSVIIRLVKLLKGKVILHLHGAEF
RDFYRDECNMVQQRHIRHTFALADHVLVLSTQWLAWLQEVIGRTQGVSVLYNAVPSLALD
RHLAQPGRIAFLGRLGTRKGVGDLIQAFALVKQRCPEAQLYLAGDGEIETYQAMAEQLGL
NGSVHCLGWIAGEAKLKLLTQTDIYCLPSYNEGFPMGVIEAMSAGIPVVASRAGGIPDAI
SDGEQGRLIEAGDVVALAQALGDLIEQRAENQRIATAAKQKFAENFSLQAVIPRLQTLYD
ELLKS
NT seq 1098 nt   +upstreamnt  +downstreamnt
ttgtaccatcaaggatgtacagtgagaaaaaacattaatctaatgatcgccacagatctg
aaaggacaaggtggtgtggcaacagtggtctcaacctacgctgattgtggttttctagaa
gaaaaccacatcaagttgattgcctcacactcaagtttggaccacgggcagaaatggcga
atgacattgcgctttatgcttgcactctgccaattgttgtactgctttatgcgttaccga
gtcggcatagtacatattcacatgtcatcaaggggaagctatcgacgtaagtctgtgatt
attcgtctagttaagcttttgaaaggaaaggttattctgcacttacatggcgccgagttt
cgtgatttctatcgagatgagtgcaatatggttcagcaaaggcatattcgacacactttt
gctttggcggatcatgtgctggttctttcaactcaatggctcgcatggctacaagaggtc
ataggtagaacacaaggcgtttctgttctgtataacgccgtacccagtttggctttagat
cgccaccttgctcaacctggccgtattgccttccttggtcgtttggggacgcgcaaagga
gtcggtgatttgattcaagcctttgcgttagttaagcagcgctgcccagaagcacagctg
tatcttgctggcgatggtgagattgaaacctatcaagcgatggctgagcagcttggcttg
aacgggtccgttcactgtttaggctggatagctggcgaagctaagctcaaattattgacc
caaactgatatttactgcttacccagttataacgaaggttttcctatgggcgttatagaa
gctatgtcggcagggattcccgtcgtcgcaagtcgagcgggcggaattcctgatgcgatc
agtgatggtgagcaaggtcgtttaattgaggccggtgatgtggttgctttagcgcaagca
ctcggagatctgattgaacagcgtgccgaaaatcaacgtattgcgaccgcggcgaagcaa
aagtttgctgaaaacttctctttgcaagcggtgatcccgcgtctacaaacactttacgat
gagcttttaaaatcatga

KEGG   Vibrio cholerae O1 El Tor N16961: VC_0926
Entry
VC_0926           CDS       T00034                                 
Name
(GenBank) hypothetical protein
  KO
K20948  polysaccharide biosynthesis protein VpsJ
Organism
vch  Vibrio cholerae O1 El Tor N16961
Pathway
vch05111  Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:vch00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   05111 Biofilm formation - Vibrio cholerae
    VC_0926
SSDB
Other DBs
NCBI-ProteinID: AAF94088
UniProt: Q9KTH6
LinkDB
Position
I:989007..990179
AA seq 390 aa
MKSTTVADISQCLLNKARTEQFAGYDPFDGLNSSWFKRLPISKDSTLGLAWIQLFKRSPI
NLRPWLGVPKARNPKGVALFILGLIEEYQVTKDPALLTEAEQLAQWLVTQRCDEQIWHGA
CWGYHFDWKARAFFVPKGKPNVITTVYVSRALHQLGQLTGRADWVDLALRSGDFIAGHLL
TQNESGEFFAYIPGETAFVHNASLWAAAWLAVVGRETSCPDYTELALRIARNSAQAQAAD
GSWAYGTRHHHGFIDGFHTGYNLEALHLIRTTLATNEFDEAIARGFHFYKQHLFEADGTA
KYYHNNPYPLDPHSVSQAIITLLSVGGEESDVVLVKRVIQRAIQTLYMPERDQFVYQRNK
RWVNRIHYARWTQAWMYLSFRFYLRITNEE
NT seq 1173 nt   +upstreamnt  +downstreamnt
atgaaatcaacgactgtagctgacattagccaatgcttattgaataaagctcgtacagaa
caattcgcaggatacgatccttttgatgggctcaattcaagctggttcaagcgcttaccg
ataagcaaagattcgactcttggtttagcgtggatccagttgttcaaacgctcaccgatt
aatcttcgcccatggctaggtgtgcccaaagcgcgaaaccctaaaggcgtggccctgttt
atcctcggattaatcgaagagtatcaagtgacaaaagatcccgctttgctcacagaagcg
gagcaactggcgcagtggctagtgactcagcgttgtgatgagcaaatctggcatggtgcc
tgttggggatatcattttgattggaaagcgcgagcattctttgttcctaaggggaagccg
aatgtgatcacgacagtctatgtcagtcgtgccttacaccaattggggcaactgacgggg
cgagctgactgggtcgacttggcgctgcgcagtggtgattttattgctggccatttattg
actcaaaatgagagcggggaattttttgcgtatatccccggtgaaacggcatttgtacac
aacgccagtttgtgggcggctgcatggctggctgtggttggccgcgaaacgtcttgccct
gattacaccgagttggcattacgcattgcgcgtaacagcgctcaagctcaagctgccgat
ggcagttgggcctatggcactcgtcatcatcatggatttattgacggatttcatacgggc
tacaacttagaagcgctacatcttatacgaacgactttagcgacaaacgaatttgatgag
gcgattgcacgcggttttcatttttacaagcagcatctatttgaagccgatggaacggcg
aagtattaccacaacaatccttatccactggatccgcactcagtatcacaggccattatt
accttactcagtgttggtggtgaggagagtgatgttgttttggttaaacgagtcattcag
cgtgctattcaaacgctatacatgcctgagcgggatcagtttgtctatcaacgtaacaaa
cgttgggttaaccgaattcactacgcgcgctggacacaggcgtggatgtacctttcattt
cgtttttatttaagaattaccaatgaggaataa

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