Vibrio cholerae O1 El Tor N16961: VC_1985
Help
Entry
VC_1985 CDS
T00034
Name
(GenBank) long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain acyl-CoA synthetase [EC:
6.2.1.3
]
Organism
vch
Vibrio cholerae O1 El Tor N16961
Pathway
vch00061
Fatty acid biosynthesis
vch00071
Fatty acid degradation
vch01100
Metabolic pathways
vch01212
Fatty acid metabolism
vch02024
Quorum sensing
vch04146
Peroxisome
Module
vch_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
vch00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
VC_1985
00071 Fatty acid degradation
VC_1985
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
VC_1985
09145 Cellular community - prokaryotes
02024 Quorum sensing
VC_1985
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
vch01004
]
VC_1985
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
vch04147
]
VC_1985
Enzymes [BR:
vch01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
VC_1985
Lipid biosynthesis proteins [BR:
vch01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
VC_1985
Exosome [BR:
vch04147
]
Exosomal proteins
Exosomal proteins of breast milk
VC_1985
Exosomal proteins of breast cancer cells
VC_1985
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Pept_S41_N
DUF4235
Motif
Other DBs
NCBI-ProteinID:
AAF95133
UniProt:
Q9KQL3
LinkDB
All DBs
Position
I:complement(2137101..2138801)
Genome browser
AA seq
566 aa
AA seq
DB search
MDKPWLSRYPKDVPETINPDQYPSLVEMFEQSVHKYADQPAFMNMGAVMTFRKLEERSRA
FAAYLQNDLKLKKGDRVALMMPNLLQYPVALFGVLRAGMIAVNVNPLYTPRELEHQLNDA
DARAIVIVSNFANTLEQIVANTQVKHVVLTSLGQMLPRAKGTIVDFVVKYVKGMVPKYDL
PGAISMRKALHKGRRLQYVKPFMSGEDIAFLQYTGGTTGVAKGAILTHRNMVANVLQAKG
AYGPVLQEGRELVVTALPLYHVFALTVNCLLFIEMGGRNLLITNPRDIPGFVKELQKYPF
TAITGVNTLFNALVNNEDFHELDFKNMKLAVGGGMAVQRAVAERWKKTTGVHLLEGYGLT
ECSPLVTGNPYDLTDYTGAIGLPVPSTEVRIVDDAGNVVPNDQVGELQVRGPQVMQGYWQ
RPEATKEVLNAEGWLSTGDIVKFDDQGLIHIVDRKKDMILVSGFNVYPNEIEDVVALHGK
VLEVAAIGQANDVSGELVKIYVVKRDPSLTKDEVIAHCRKHLTGYKVPKLVEFRDDLPKT
NVGKILRRVLREENDAQLAAKAKQSA
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
gtggataaaccttggctttcacgttatccgaaagacgtaccggaaaccattaatcctgat
cagtacccatcactggtcgaaatgtttgaacaatcggtacataagtacgcggatcagcca
gccttcatgaacatgggcgcggtgatgacattccgtaagctggaagagcgcagccgcgcc
tttgcggcttatttacaaaacgatctcaagctgaaaaaaggtgaccgtgtcgctctgatg
atgccgaacttgctgcaataccctgtggcgctgtttggtgttctgcgtgctggcatgatc
gcagtgaacgtcaacccactttacactccgcgagagctggagcatcaactgaatgatgcg
gatgcgcgcgcgattgtgatcgtctcaaactttgctaacaccttagagcagatcgttgcc
aatacacaggtcaagcatgtggtgctgaccagtcttggacagatgctgccacgcgccaaa
ggcacaattgtcgatttcgttgtgaaatacgtcaaaggcatggtacctaagtacgatcta
ccgggcgcgatttcgatgcgtaaagcgctgcacaaaggccgccgtctgcaatacgtgaag
ccgtttatgtccggtgaagacattgccttcctgcaatacactggcggtacaaccggtgtg
gcgaaaggcgccattctgacgcaccgcaacatggtcgcaaacgtgctgcaagccaaaggc
gcttacggccctgtgctgcaagagggtcgcgagctggtggtcaccgcactgccgctgtac
cacgtgtttgccttaaccgtaaactgcttgctgtttattgaaatgggtggccgcaactta
ttgatcactaacccgcgtgatataccgggctttgtgaaagagctgcaaaagtacccattt
acagccattaccggtgtaaacaccctgtttaatgcgctggtgaataacgaagatttccac
gagctcgacttcaaaaatatgaagctagcagttggtggtggtatggcggtacaacgcgct
gttgccgagcgttggaaaaagactaccggtgtccatttgctcgaaggctatggtttgacc
gagtgttcgccactggtgaccggcaacccatacgatttgacggattacacgggtgcgatt
ggtttaccagtaccgtcaaccgaagtgcggattgtggatgatgcgggtaatgtggtgcct
aacgatcaagttggtgagctgcaagtgcgtggtccacaagtcatgcaaggttactggcag
cgtcctgaagcgaccaaagaagtgctcaatgctgagggatggctttcaactggcgatatt
gtgaaattcgatgatcaaggtttgatccacattgttgatcgtaagaaagacatgattctg
gtttcaggctttaacgtttatccgaatgaaatcgaagatgtggtggcgctgcacggcaaa
gtgctagaagtcgcagcgattggtcaggctaacgatgtttctggcgaattggtgaagatt
tatgtggtgaagcgcgacccaagcttgaccaaagacgaagtgattgctcactgtcgtaag
catctgactggctacaaagtgccaaaactggttgaatttcgtgacgacctgccaaaaacc
aacgtgggcaaaatcctgcgtcgtgtgctgcgtgaagaaaatgacgcacagttggcagca
aaggcgaagcaaagcgcataa
Vibrio cholerae O1 El Tor N16961: VC_2341
Help
Entry
VC_2341 CDS
T00034
Name
(GenBank) long-chain-fatty-acid--CoA ligase, putative
KO
K01897
long-chain acyl-CoA synthetase [EC:
6.2.1.3
]
Organism
vch
Vibrio cholerae O1 El Tor N16961
Pathway
vch00061
Fatty acid biosynthesis
vch00071
Fatty acid degradation
vch01100
Metabolic pathways
vch01212
Fatty acid metabolism
vch02024
Quorum sensing
vch04146
Peroxisome
Module
vch_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
vch00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
VC_2341
00071 Fatty acid degradation
VC_2341
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
VC_2341
09145 Cellular community - prokaryotes
02024 Quorum sensing
VC_2341
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
vch01004
]
VC_2341
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
vch04147
]
VC_2341
Enzymes [BR:
vch01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
VC_2341
Lipid biosynthesis proteins [BR:
vch01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
VC_2341
Exosome [BR:
vch04147
]
Exosomal proteins
Exosomal proteins of breast milk
VC_2341
Exosomal proteins of breast cancer cells
VC_2341
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
AAF95484
UniProt:
Q9KPM6
LinkDB
All DBs
Position
I:2493591..2495282
Genome browser
AA seq
563 aa
AA seq
DB search
MRMIQPNQFNHPPCALPPPNEMLLRWAKERPNEVYLKQIINRQFVEFTYAEVADKALRLV
SALRALGADPGDKVALISKNCAEWFICDLAMMLGDYISVPIFPTAGSETIDYCLEHSESK
ILIVGKLDDNKATAHVLAERPNLISISLPYPSAAKCQYEFQTLIKQHQPSEERPTHFDEK
LMSIVYTSGTSGQPKGAMLTYGAFTWSAQQLINHIGIEENDRLFSYLPLAHITERVYIFG
SSIIGGVLTAFPESLDTFIEDVKMHRPTLFISVPRLWTLFQQRIQDKLPQKKLNILLKIP
FVNSLIKRKLADGLGLDQARVLGCGSAPVSPALLEWYRSVGLNITEAWGMTESFAYSTLN
YPFRADKIGTVGNAGPGIELKIAEDEEILVRSKGLFAGYYKNDTATAESFNDDGWLHTGD
IGSLDSEGYLTIQGRKKDTFKTAKGKFVAPVPIEKKLFEYSRVEMMCLIGSGLPAPILLA
VPHNFPHFDRARYERTTQKVIARINSELESHEQIKGVLMIKDPWSIDNGILTPTLKIKRH
VLEKKYHDVGQNWPKGQLVVWEE
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
ttgagaatgatccagcctaatcagttcaatcaccctccttgtgctctcccaccacccaat
gagatgttgctgcgttgggctaaagagcgtccgaatgaggtgtacctaaaacagattatt
aaccgccaatttgttgagtttacttacgccgaagttgcggataaggctctacgcctcgtt
tccgctttgcgagccttaggggctgatccgggcgataaagttgcattaatttcaaaaaac
tgtgcggaatggtttatttgcgatttagccatgatgctcggggattacatcagtgtgccg
atcttcccgaccgcaggcagtgagactatcgattactgccttgagcacagtgaaagtaaa
atcctgatcgtcggcaagctggatgataataaagccactgcgcatgtgttagcagagcgt
cctaatcttatcagtatctcgcttccttatccttcggcagccaaatgccaatatgagttt
caaacgctgatcaaacagcatcaacccagtgaagagcgccccacccactttgatgaaaaa
ctgatgtccatcgtttatacctctggtacatcaggacaaccgaaaggtgccatgctcact
tatggcgcatttacttggtccgcccaacaactgatcaaccacataggtatcgaagaaaac
gatcgacttttctcatatctgccactcgctcatatcactgagcgagtttatatttttggt
tcatcgatcatcggtggcgtactgaccgcatttccggaatctctcgatacctttatcgaa
gatgtcaaaatgcaccgtccaaccctgttcatttctgtacctcgtttatggacactgttc
caacaacgcatccaagataaactgccgcagaaaaagctgaatattctgctcaaaatcccc
ttcgtcaactcactcatcaaacgtaagttggccgatggtttagggctagatcaagctcgc
gtgctcggttgtggctccgcaccagtctctcctgcattactcgaatggtatcgcagtgtc
ggactaaacattaccgaagcgtggggcatgacggagtcctttgcatacagcacactcaac
tatccattccgtgctgacaaaatcggtactgtgggtaatgcaggaccgggcattgaactg
aaaatcgcggaggatgaagaaatcttagtccgcagcaaaggcttgtttgctggctactat
aaaaatgacaccgcgacagccgaaagctttaacgatgacggttggctacatactggcgat
atcgggtcattggatagtgaaggctatttaaccattcaaggtcgtaaaaaagacaccttt
aaaaccgctaaaggcaagttcgtcgcccccgtacctatcgagaaaaagctgtttgaatac
agccgagttgagatgatgtgcttgatcggctctggtctcccagcccccattttgttagcc
gttccgcacaatttccctcactttgatcgtgcgcgttatgaacgcaccacccaaaaagtg
atagcacgcatcaatagtgaattggaatctcacgaacaaattaaaggggtgttaatgatt
aaagatccttggagcattgataacggcatcttaacgccaacgctcaagatcaaacgtcat
gttctagagaagaaatatcacgatgtcggccaaaactggcctaaaggtcagctcgtcgtt
tgggaagagtaa
Vibrio cholerae O1 El Tor N16961: VC_2484
Help
Entry
VC_2484 CDS
T00034
Name
(GenBank) long-chain-fatty-acid--CoA ligase, putative
KO
K01897
long-chain acyl-CoA synthetase [EC:
6.2.1.3
]
Organism
vch
Vibrio cholerae O1 El Tor N16961
Pathway
vch00061
Fatty acid biosynthesis
vch00071
Fatty acid degradation
vch01100
Metabolic pathways
vch01212
Fatty acid metabolism
vch02024
Quorum sensing
vch04146
Peroxisome
Module
vch_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
vch00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
VC_2484
00071 Fatty acid degradation
VC_2484
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
VC_2484
09145 Cellular community - prokaryotes
02024 Quorum sensing
VC_2484
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
vch01004
]
VC_2484
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
vch04147
]
VC_2484
Enzymes [BR:
vch01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
VC_2484
Lipid biosynthesis proteins [BR:
vch01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
VC_2484
Exosome [BR:
vch04147
]
Exosomal proteins
Exosomal proteins of breast milk
VC_2484
Exosomal proteins of breast cancer cells
VC_2484
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
AAF95626
UniProt:
Q9KP89
LinkDB
All DBs
Position
I:complement(2664163..2665968)
Genome browser
AA seq
601 aa
AA seq
DB search
MTNLDFHIVKRIRQRIAQGGDNAALKHKQNGQWQAINWHQFGEQLDELSMALLAQGIGVQ
DKIAIFSNNMPRWTIADFAALQIRAVTVPIYPTNTPEQAAYILQNADVKVVFVGEQAQFD
AALSQFEQCPELRLIVAMNANIDLKQASCAMHWDEFVAQSHHQDRAPLDALIEQANYDDL
FTLIYTSGTTGTPKGVMLDYRNIGAQLEGHDQRLNLTQEDVSLCFLPLSHVFERAWTAYV
LYKGATNCYLQDVAHVREALAEVRPTVMCAVPRFYEKIFSAIHEKVVKAPLVRKVLFTWA
VNMGAKMAVCRQQQRQPSWMLKQSHQFADKLVLSKLRALLGGRINFMPCGGAKLDETIGR
FFHAIGINVKLGYGMTETTATVSCWDDHCFNPDSIGLSMPGAQVKIGENNEILVRGPMVM
RGYYKLDKETTESFDEQGFLKTGDAGHIDENGNLFITDRIKELMKTSGGKYIAPQVIEGA
IGKDHFIEQIAVIADTRKFVSALIVPCFDSLEEYAKELNIKYHDRLELIKHSQVLEMFEK
RVNELQKELAKFEQVKKFRLLPKAFSMDSGELTPTQKLRRKVINDRYQDEIEEMYQDSPK
K
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgacgaacttagatttccacatcgttaaacggatccgccaacgtattgcccaagggggt
gataacgccgcgctaaaacataaacaaaacggccaatggcaagcaatcaattggcaccag
tttggtgaacaattggatgaactctcgatggcgttgttagctcaaggcatcggtgtacag
gacaaaattgcgattttttccaacaacatgccacgttggacgattgctgattttgccgcc
ttacagatccgtgcggtaacggttcctatctatcctaccaatacgccagagcaggcggct
tacatcttacagaatgcggatgtgaaagtggtttttgtgggtgagcaggcacaatttgat
gctgcactcagccaatttgaacaatgcccagagctgcgtctgattgtggctatgaatgcc
aatatcgacctcaaacaagccagttgtgcgatgcattgggatgagtttgttgctcaaagt
caccatcaagatcgagcgccgttggatgccttaattgagcaggccaactatgacgatctg
tttaccctcatttatacctccggcactaccggaacgccgaaaggggtgatgctggattat
cgtaatatcggtgctcagctagagggacacgatcagcgcctgaatctgactcaagaggat
gtctcactctgtttcctgccactttctcatgtctttgagcgagcatggacggcgtatgtg
ctttataaaggtgcgaccaactgttacttgcaggacgtggctcatgtgcgtgaagcttta
gctgaagtccgtccaaccgtgatgtgtgccgtaccgcgcttttatgaaaagatcttctca
gcaatccatgaaaaagtcgttaaagcgccgttggtacgcaaggttctttttacttgggct
gtcaatatgggggcgaaaatggcggtgtgccgtcagcagcagcgccaaccttcttggatg
cttaaacagagccatcaattcgctgacaagctggtgttaagtaagctgcgcgctttgctt
gggggaagaatcaatttcatgccttgtggtggcgctaagttggatgaaaccattggccgc
tttttccatgcgattggtattaacgtcaagcttggttatggcatgaccgaaaccacggcc
acggtttcttgttgggatgaccactgttttaacccagattcgattgggctttctatgccg
ggagctcaagtcaaaattggcgagaacaatgaaattctggttcgtggtcctatggtgatg
cgtggctactacaagctcgataaagaaaccaccgaaagttttgatgagcagggttttctg
aaaacgggtgatgcgggtcatattgatgaaaatggtaatttatttattaccgatcgcatc
aaggaactgatgaaaacctcaggtggtaaatatattgcgccgcaggtgattgaaggggcg
attggtaaagatcatttcatagaacagatcgcggtgattgccgatacgcgcaagtttgtc
tcggctttgattgtgccttgctttgattcattggaagagtatgccaaagaactgaacatt
aaatatcatgaccgtctggagcttatcaaacatagccaagtactggagatgtttgaaaag
cgcgttaatgagttacaaaaagagctggcgaaatttgaacaagtgaagaagtttagattg
ttgccaaaagcattttcgatggacagtggtgagctgacaccgacccaaaaactgcgtcgt
aaagtgattaacgatcgctatcaggatgaaatcgaagaaatgtaccaagattctccgaaa
aaatag
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