KEGG   Vibrio cholerae O1 El Tor N16961: VC_2647
Entry
VC_2647           CDS       T00034                                 
Name
(GenBank) conserved hypothetical protein
  KO
K10917  PadR family transcriptional regulator, regulatory protein AphA
Organism
vch  Vibrio cholerae O1 El Tor N16961
Pathway
vch02024  Quorum sensing
vch05111  Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:vch00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    VC_2647
   05111 Biofilm formation - Vibrio cholerae
    VC_2647
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:vch03000]
    VC_2647
Transcription factors [BR:vch03000]
 Prokaryotic type
  Helix-turn-helix
   PadR family
    VC_2647
SSDB
Motif
Pfam: Vir_act_alpha_C PadR HTH_34
Other DBs
NCBI-ProteinID: AAF95788
UniProt: H9L4T0
LinkDB
Position
I:2821501..2822040
AA seq 179 aa
MSLPHVILTVLSTRDATGYDITKEFSASIGYFWKASHQQVYRELNKMGEQGLVTCVLEPQ
EGKPDRKVYSITQAGRSALGEWFDQPTAHPTVRDEFSAKLMACSVQSAEPYRLQLAELVE
ESRKLVAHYQEIEAAYYANPAVLDKQQRLERLTLRRNLLVRQAWIQWADEVLAELNAMA
NT seq 540 nt   +upstreamnt  +downstreamnt
atgtcattaccacacgttatccttactgttcttagcacacgcgatgcaaccgggtacgat
ataaccaaagagttttctgctagcattggctacttctggaaagccagccatcagcaggta
tatcgtgaactcaataaaatgggggaacagggtttagtgacttgtgttctggaaccacag
gaaggcaaaccagatcgcaaggtttattctataacccaagctggccgcagcgctttaggt
gagtggtttgatcaaccaaccgcacacccaaccgtgcgtgatgagtttagtgcgaaattg
atggcttgttcagtacaatcggcagaaccttaccgtctgcaactggctgaactggttgaa
gaatcgcgtaaattggtcgctcactatcaggaaatcgaagccgcttattacgctaaccca
gccgtgttagacaagcagcaacgtttagagcgtttaacgctacgtcgtaatttactggtt
cgccaagcatggattcaatgggcggacgaagtgttggcagaattgaacgcgatggcataa

DBGET integrated database retrieval system