Vibrio cholerae O1 LMA3984-4: VCLMA_A0002
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Entry
VCLMA_A0002 CDS
T01871
Symbol
trmE
Name
(GenBank) GTPase and tRNA-U34 5-formylation enzyme TrmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
vcl
Vibrio cholerae O1 LMA3984-4
Brite
KEGG Orthology (KO) [BR:
vcl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vcl03016
]
VCLMA_A0002 (trmE)
Transfer RNA biogenesis [BR:
vcl03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
VCLMA_A0002 (trmE)
Prokaryotic type
Methyltransferases
VCLMA_A0002 (trmE)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
Dynamin_N
RsgA_GTPase
ABC_tran
AIG1
Ras
Roc
Gtr1_RagA
SRPRB
Arf
AAA_28
AAA_18
AAA_29
DUF4702
Motif
Other DBs
NCBI-ProteinID:
AEA77324
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All DBs
Position
I:complement(816..2177)
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AA seq
453 aa
AA seq
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MTTDTIVAQATAPGRSGVGIIRVSGPLAAHVAQTVTGRTLRPRYAEYLPFTDEDGQQLDQ
GIALFFPNPHSFTGEDVLELQGHGGPVVMDMLIRRILQIKGVRPARPGEFSERAFLNDKM
DLTQAEAIADLIDASSEQAAKSALQSLQGEFSKRIHTLVESLIHLRIYVEAAIDFPEEEI
DFLADGKVSADLQTIIDNLAAVRREANQGAIMREGMKVVIAGRPNAGKSSLLNALSGKES
AIVTDIAGTTRDVLREHIHIDGMPLHIIDTAGLRDASDAVEKIGIERAWEEIRQADRVLF
MVDGTTTEATDPQDIWPDFVDKLPENIGITVIRNKADQTGEPLGICHVNQPTLIRLSAKT
GQGVDALRQHLKECMGFSGNQEGGFMARRRHLDALERAAEHLAIGQQQLEGYMAGEILAE
ELRIAQQHLNEITGEFSSDDLLGRIFSSFCIGK
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgacaacagataccattgtcgcgcaggctacggcacccggccgtagtggtgtcggcatt
atccgtgtatcaggcccactggctgcccacgtcgcgcagacagtcactggacgcacgctc
agaccccgctatgccgaatacttgcctttcaccgatgaagatggccagcagctcgatcaa
ggcattgcgctgtttttccccaatcctcattcatttaccggtgaagatgtgcttgagctg
caaggtcacggtggcccggtcgtcatggatatgctgatccgccgtattttgcagattaaa
ggagtgcgcccagcccgtcccggtgaattctcagaacgcgctttcctcaatgacaagatg
gatttaacccaagcggaagccatcgcagacctgattgatgccagctctgagcaagccgcg
aaatccgcgctgcaatcactgcaaggcgagttttctaaacgcatccataccttggtggaa
tcgctgattcacctgcgcatctatgttgaagccgcaattgatttcccagaagaagagatc
gattttctggccgatggtaaggtttccgctgatctgcaaaccatcatagataatcttgcc
gcagtgcgccgtgaagccaaccaaggcgccattatgcgcgaagggatgaaggtggtgatt
gctgggcgtcctaatgcgggtaaatcgagcctactcaatgcgctttcaggtaaagagtct
gccatcgtcaccgacattgccggtaccacccgtgatgttctgcgtgagcatatccatatt
gatgggatgcctctgcacatcatcgataccgcgggactacgagacgcttctgatgcggta
gaaaaaattggtattgagcgcgcatgggaagagatccgccaagccgatcgcgtactgttt
atggtcgatggcaccaccacagaggccaccgatccacaggacatctggcctgattttgtt
gacaaactgccagagaatattgggatcactgtgatccgtaataaagccgatcaaactggt
gagccccttgggatctgccatgttaatcaacccaccttgatccgcctatcagccaaaaca
ggccaaggggtcgatgccttgcgtcagcacctcaaagagtgcatgggtttttcaggcaat
caggaaggtggctttatggcacgccgccgtcatctcgatgccctagagcgagccgcagag
cacttagcgattggccagcaacaacttgaaggctatatggccggagaaatcctcgccgaa
gagctgcgtatagcccagcaacaccttaacgaaattacgggcgagttcagctccgatgat
ctgcttggccgcattttttcatcattctgtattgggaaatag
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