Vibrio cholerae O1 LMA3984-4: VCLMA_B0064
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Entry
VCLMA_B0064 CDS
T01871
Name
(GenBank) Transcriptional regulator CdgA
KO
K20956
diguanylate cyclase [EC:
2.7.7.65
]
Organism
vcl
Vibrio cholerae O1 LMA3984-4
Pathway
vcl05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vcl00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
VCLMA_B0064
Enzymes [BR:
vcl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.65 diguanylate cyclase
VCLMA_B0064
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Gene cluster
GFIT
Motif
Pfam:
GGDEF
DUF4123
TrwB_AAD_bind
Motif
Other DBs
NCBI-ProteinID:
AEA79711
LinkDB
All DBs
Position
II:complement(80504..81604)
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AA seq
366 aa
AA seq
DB search
MNTQTQKTLHPLILHAKTLLIFMSAILILANLYLINSTRDLSKSYSSHTNQAIWFLFQLN
KEFTEMLALSPYLLESESNQRDVMVKYELTWSRFDLILNSPEADGIIGMPSTREFFQAAF
ARFKQLEPLLLAAKNPESLQTFIVAAQQELEIFIQFINRTFGMQSPLYVEQKEKLNYLSR
IQFALILLTFSCVGLVSFILHKEATHHRVLALTDPLTGLENRTAMFAELERHRRSGGFSL
FLLDLNGFKQINDTYGHQMGDAVLKQVAYRLNNSIPSFDYRVFRMGGDEFAIILSSINST
EQMMMQRMIKQCFDHEFELSGDLRAKLNTSVGVSTYPLDSTNLSQLIHLADKNMYEMKFL
QKSPSS
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgaatacacaaactcagaaaacgctccacccgctgatcttacatgccaaaacactgctg
atcttcatgtcggcgattctgattttggccaatttgtatttgatcaacagtactcgcgat
ttatctaagtcttactcttcgcatactaaccaagcgatctggttcttattccagctcaat
aaagagtttactgagatgctggcactctccccctacctattggagtcggagagcaaccag
cgcgatgtgatggtgaaatatgagctgacttggagccgttttgatctgatcctcaatagc
ccagaagccgacggcattataggcatgcccagcactcgcgaattcttccaagccgcgttt
gcgcgctttaaacaacttgaaccgctactgcttgcggccaaaaatccagaaagcttacaa
acttttattgttgccgcccaacaagagctggagatttttattcagttcataaaccgcaca
tttggaatgcaaagtcctttgtatgtagagcaaaaagagaaactgaattacctcagtcgc
atccagtttgcgttaattttgttgacgtttagctgtgtgggactggtgagttttatttta
cataaagaggccacgcaccatagagtgttggccttaacggacccattaacagggctggaa
aaccgcacagccatgttcgccgaattagaacgccaccgccgcagcggtggattctctctc
tttttgctcgatctgaatggttttaaacaaattaatgatacctacggccatcaaatgggc
gatgcggtactcaaacaggttgcttatcgcttaaacaactcgattccttcattcgattat
cgtgtgtttcggatggggggagatgaatttgccatcatcctaagcagcatcaattcgacc
gagcagatgatgatgcagcgcatgatcaaacagtgtttcgaccatgaatttgaattaagt
ggcgatttacgagccaagctcaacaccagcgttggggtcagtacttatccactcgacagc
accaatttgagccagttgatccatctggcagataaaaacatgtatgaaatgaaattccta
caaaaaagcccctcatcgtga
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