Vibrio cholerae O1 M66-2: VCM66_1121
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Entry
VCM66_1121 CDS
T00891
Symbol
aspS
Name
(GenBank) aspartyl-tRNA synthetase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
vcm
Vibrio cholerae O1 M66-2
Pathway
vcm00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
vcm00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
VCM66_1121 (aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
vcm01007
]
VCM66_1121 (aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vcm03016
]
VCM66_1121 (aspS)
03029 Mitochondrial biogenesis [BR:
vcm03029
]
VCM66_1121 (aspS)
Enzymes [BR:
vcm01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
VCM66_1121 (aspS)
Amino acid related enzymes [BR:
vcm01007
]
Aminoacyl-tRNA synthetase
Class II (A)
VCM66_1121 (aspS)
Transfer RNA biogenesis [BR:
vcm03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
VCM66_1121 (aspS)
Prokaryotic type
Other AARSs
VCM66_1121 (aspS)
Mitochondrial biogenesis [BR:
vcm03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
VCM66_1121 (aspS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
GAD
tRNA_anti-codon
tRNA-synt_2b
Motif
Other DBs
NCBI-ProteinID:
ACP05438
UniProt:
C3LLL2
LinkDB
All DBs
Position
I:1195563..1197338
Genome browser
AA seq
591 aa
AA seq
DB search
MRSHYCGHLNKSLVGQTVELCGWVNRRRDLGGLIFIDMRDREGIVQVVVDPDMADVFAVA
NQLRSEFCIKLTGEVRARPESQVNKEMATGEVELLARSLEIINRSDVLPLDFNQKNSEEQ
RLKYRYLDLRRPEMSDRIKLRAKASSFVRRFLDTHGFLDIETPVLTKATPEGARDYLVPS
RVHKGSFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDIETSFMT
AEQVRAVTEKMIREMWLELLNVDLGDFPIMPYSEAMRRFGSDKPDLRNPMELVDVADLLK
DVDFKVFSGPANDPKGRVAALCIPGGAALTRKQIDEYTAFVAIYGAKGLAWLKVNDLAAG
MEGIQSPVAKFLTEEIIQAIIERTQAQTGDIILFGADSAKVVAEALGALRLKAGKELGIT
NESAWAPLWVVDFPMFESDDEGNVAAMHHPFTSPLNLSPEQLKANPEEALSNAYDMVLNG
YEVGGGSVRIHNAEMQSAVFDILGITPEEQRLKFGFLLDALKFGTPPHAGLAFGLDRLVM
LLCGTENIRDVIAFPKTTAAACLMTDAPSLANPAALEELAIAVKLATKDKA
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgcgtagccattattgtggtcacctgaacaagtccttggtaggacaaactgtagagctg
tgcggctgggttaatcgccgtcgtgatttaggcggtctgatcttcattgatatgcgagat
cgtgaaggtattgttcaggtagtagtggatccggatatggcggatgtattcgccgtggct
aaccaactgcgtagcgaattctgtatcaaattgaccggtgaagtgcgtgcgcgtccagaa
agccaagtcaataaagagatggcaaccggtgaagtagaactgttggcacgtagccttgag
atcattaaccgttcagatgttctgccgctcgatttcaaccaaaagaactcagaagagcaa
cgcctcaagtaccgttatttggatctgcgtcgcccagagatgagtgaccgcattaaactg
cgtgcgaaagcctcaagctttgtacgccgtttcttggatacacacggtttccttgatatc
gaaaccccagtgttgaccaaagcgacaccagaaggtgcgcgtgactacctagtaccaagc
cgtgtacacaaaggcagtttctacgcgctgccacaatcaccacagctgtttaaacagcta
ctgatgatgtctggctttgatcgttattaccaaatcgtaaaatgtttccgtgacgaagat
ttgcgcgctgaccgtcaaccagaattcacccagatcgatattgaaacctctttcatgacc
gcagaacaagtacgcgcagtgactgagaagatgattcgtgaaatgtggcttgaactgctg
aatgtggatctgggcgattttccaatcatgccttacagcgaagcgatgcgtcgtttcggc
tcagacaagccagatctgcgtaacccaatggagttggtggatgtggcggatctgctgaaa
gacgtcgatttcaaagtgttctctggtccagcgaacgatccaaaaggccgcgttgctgca
ctgtgcatcccaggtggcgcagcactgactcgtaaacaaattgatgagtacaccgcattt
gtggctatttacggcgcaaaaggcttggcatggctgaaagtcaacgatttggctgcgggc
atggaaggtattcaatcgcctgtagcgaaattcctcactgaagagatcattcaagcgatt
atcgagcgtactcaagcgcaaactggcgatatcattctgttcggtgccgattctgccaaa
gtggttgctgaagcgctgggcgcactgcgtctgaaagcgggtaaagagttgggtattact
aatgaatcggcgtgggctccattgtgggtcgtggatttcccaatgttcgaaagcgatgat
gaaggtaacgtggcagcgatgcaccacccattcacatcccctctgaacctctctcctgag
cagttgaaagccaacccagaagaggcgctgtcaaacgcttacgatatggtattgaacggc
tacgaagtcggtggtggttcagtccgtattcacaacgcagaaatgcaatcagccgtattt
gacattctgggtatcacgccagaagagcaacgtctcaagtttggtttcctgctcgatgcg
ctgaagtttggtacgccaccacacgcaggtctggcatttggtctggatcgtctggtgatg
ctgctgtgcggtacggaaaacatccgtgatgtcattgccttcccgaaaacgacagccgcc
gcgtgtctaatgaccgatgcaccaagtttggcaaaccctgccgccctcgaagagttggcg
attgcggtcaagcttgcaacgaaagataaagcgtaa
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