Volvox carteri f. nagariensis: VOLCADRAFT_127336
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Entry
VOLCADRAFT_127336 CDS
T01330
Name
(RefSeq) hypothetical protein
KO
K13345
peroxin-12
Organism
vcn
Volvox carteri f. nagariensis
Pathway
vcn04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
vcn00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
VOLCADRAFT_127336
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
vcn04121
]
VOLCADRAFT_127336
Ubiquitin system [BR:
vcn04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Peripheral membrane proteins
VOLCADRAFT_127336
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pex2_Pex12
zf-C3HC4_2
zf-C3HC4
zf-C3HC4_3
zf-RING_2
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
9625266
NCBI-ProteinID:
XP_002946144
JGI:
127336
UniProt:
D8THW8
LinkDB
All DBs
Position
Unknown
AA seq
424 aa
AA seq
DB search
MFVHLGGDENSKPTYFEVIAADRLVPSLKAAVIYALSVFSQRHPWVYRLLNYDDEVFALL
TLVLDGHSLLSSDSTFSDSLYGLKLQPLRPGQNGRERLTRRQRWLVLACKVLLPYLKSKA
DKVIRRSASASGGILALALRYGGEQGSSTAAATAASSGPPGRRAHGGEAEGEAEGEGEGA
SGDLRERLVRAFVAAYPWLHAALEGTTFAYHLSYLLGASSVHHPVLHALGVSVARTSAKD
LMDADKAKQASRQALLQALRASRAAAATAATAASGSRTMRGAAAAARHAVTTGRYGLVRG
LLAARWLLEDHARSSLILAVFGFKALEWWYSTAEGSLARSKVLPPPPPPPPPRPVPPPGG
VGLPADPSDCPLCRKRTTNPATIATSGYVFCYPCAFNHVMQHGCCPVSLLPAGLDHVRKL
YEAA
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgttcgtgcacttaggtggtgacgagaactcgaaaccgacatattttgaagttattgca
gctgaccgacttgtgccaagcttaaaggcggcagtaatctatgcgctttcggtcttttcc
cagcggcatccttgggtgtaccgacttcttaactacgatgacgaggtgttcgcgcttctc
acgctagtcctcgacggccacagcctactgagctccgacagcaccttctcagacagcttg
tatgggttgaagctgcagcccctgcgtccggggcagaacggccgggaacgcctgacacgt
cggcaacgctggctcgtacttgcctgcaaagttctgctgccctaccttaaatccaaagcg
gataaggttatccgccgctccgcctctgcttcgggcggcatacttgcgcttgcgttgcga
tacggtggagagcagggctcctccaccgccgccgccaccgccgcgtcctcagggccccca
ggtcggagagcccatggcggggaggccgagggggaggctgagggggagggggagggggcg
tccggcgacctgcgggagcggttggtgagggcctttgtggcggcttacccctggctgcac
gccgccttggagggcacgacattcgcttaccatctgtcgtaccttctcggtgcaagttcc
gtacaccatcccgtactacatgccctcggtgtgagcgtcgcccgcacctcggccaaggac
cttatggatgctgacaaggcgaagcaggcaagccgtcaggcgttgctgcaggcgctgagg
gcgagcagggcagcggcggcgacagcagccactgcggcgtccgggagtcgtacgatgcgc
ggcgccgcggcagcggcgcggcatgccgtcaccacggggcgttacggcttggtccggggc
ctcctggcggctaggtggctactagaggaccacgcgcgcagcagcctcatcttggcggta
tttggatttaaggctctggagtggtggtactccacggcggaggggtcactggcgcgcagc
aaggtcctgccgccgccgccgccaccgccgccaccgcggcccgtgccgccgccggggggg
gtcggactgcccgcggacccgtcagactgtccgttgtgcaggaaacgcaccactaacccc
gccaccatcgccacctcgggctacgtgttctgctacccttgcgctttcaaccacgtcatg
cagcacggctgctgccccgtctcgctgctgccggcaggactagaccacgtacggaaactg
tacgaggccgcgtag
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