Volvox carteri f. nagariensis: VOLCADRAFT_58186
Help
Entry
VOLCADRAFT_58186 CDS
T01330
Name
(RefSeq) hypothetical protein
KO
K01874
methionyl-tRNA synthetase [EC:
6.1.1.10
]
Organism
vcn
Volvox carteri f. nagariensis
Pathway
vcn00450
Selenocompound metabolism
vcn00970
Aminoacyl-tRNA biosynthesis
vcn01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vcn00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
VOLCADRAFT_58186
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
VOLCADRAFT_58186
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
vcn01007
]
VOLCADRAFT_58186
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vcn03016
]
VOLCADRAFT_58186
Enzymes [BR:
vcn01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.10 methionine---tRNA ligase
VOLCADRAFT_58186
Amino acid related enzymes [BR:
vcn01007
]
Aminoacyl-tRNA synthetase
Class I (U)
VOLCADRAFT_58186
Transfer RNA biogenesis [BR:
vcn03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
VOLCADRAFT_58186
Prokaryotic type
Other AARSs
VOLCADRAFT_58186
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_1g
tRNA-synt_1
tRNA-synt_1e
Anticodon_3
Anticodon_1
Motif
Other DBs
NCBI-GeneID:
9624339
NCBI-ProteinID:
XP_002948343
JGI:
58186
UniProt:
D8TPE3
LinkDB
All DBs
Position
Unknown
AA seq
643 aa
AA seq
DB search
MLRTVAKQYLPFQPSLAPPRPVLWAVSRGDVAPVRAPSAHAVRRLDVRTCCSSCPSPAPS
SNPPNQDYFTITTPLYYVNAAPHMGSAYPTIAADVASRFQRLLGKRVRFLTGTDEHGEKI
AAAASGRGLSPQEHCDDIVAQYTDLWDKLDIQYDRFVRTTESRLAELVVDVLVRCWERGD
IYSADYEGWYCVDCEEFKGQSESQPRGCPTHRKPCQHRKEANYFFRLSKYSKWIEELLSR
EDFVQPASRRNELMSYVREGLRDFSISRAAVDWGIRVPQDPKHTVYVWFDALIGYLSGLL
PPDVPATTSEVPVHGWPASVHVIGKDILRFHAIYWPGMLLSAGLPLPQRVYGHGFLTKDG
LKMGKALGNTLDPRALVAAYGADAVRLYFMKEIVFGQDGDFSEVRFRDAVNAALANNLGN
GLNRTLNLLAKFHDRTIPVDASSLPADLPLRQMAAERLPAAASAYSALSFHEAAEAVLAL
ASRSNQYLEETQPWTKLKKGSDEEKAEAAAVLVAVLEAVRIVAVGLVALTPGLSRRIYSQ
LGFSEEQFQALSWADTAWGGLKAAHRTAEPAPVFVRLEAPGEAEAAAEAAAKAKATAAAA
ATKPKKAKGGKGAAEDKKAKGGKSQQGQEAQAAQQAQEQAAVV
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atgctgaggacagttgcaaagcagtacctgccattccagccgtctctcgctccgcctcga
ccggtgctctgggcggtgtctcgcggcgatgttgcgcctgtcagagctccttcagctcat
gccgtccgacgtctcgacgtgcggacgtgctgctccagctgcccctcacccgcaccaagc
tccaaccctcctaaccaggactacttcacaatcaccaccccgctttactacgtcaatgca
gcaccccacatgggcagtgcctaccctaccatcgccgcggatgtggcgtctcgttttcag
cggctgctgggcaagcgtgtccgcttcctgaccggtacggacgagcacggtgagaagatc
gcggcggcggcctccgggagggggctcagtccccaggaacactgcgacgacatcgtggcg
cagtacactgacctgtgggacaaacttgacattcagtacgacaggttcgtacgtacgaca
gaatctcgccttgcggagcttgtggtggatgtgttggttcgttgttgggagcgaggtgac
atatattctgctgactacgaggggtggtactgcgtggactgcgaggaattcaaggggcag
tccgagtcccagcccaggggctgccccacacatcggaagccctgtcagcaccgtaaggag
gccaactactttttccgcctgagcaagtactccaagtggatcgaggagctgctgtcgcgg
gaggacttcgtacagcccgcgtcgcgccggaatgagcttatgtcgtacgtccgcgagggc
ctgcgcgacttctccatcagccgtgcggcagtggactggggcatccgtgtcccacaagac
cccaagcacacggtgtatgtgtggtttgacgcgctcatcggctacctgtccgggctgctt
ccccccgatgtgcccgccaccacctccgaggtccccgtgcacggctggcccgcctccgta
cacgtgatcggcaaggacatcctgcgcttccacgccatctactggcccggaatgctcttg
tcggcgggactgccactgccgcagcgagtgtacggccacggcttcctgaccaaggatggt
ctcaagatgggcaaggcactgggcaacaccctggacccccgggcactggtcgcagcgtac
ggtgcggatgccgtacggttgtacttcatgaaggagattgtgtttggccaagacggcgac
ttcagcgaggtgcgattccgggatgcggtcaacgcagccctcgccaacaacctgggcaac
ggtctcaaccgaacgctcaacctcctggccaagttccacgatcggaccattcccgtggac
gcctcctctctgcccgcggacctgcctctgaggcagatggcagcggagcgcctgcctgcc
gccgccagcgcctacagcgccctgtccttccacgaggcggctgaggcggtgctggcgctg
gcctcacggagcaaccagtacctggaggaaacacagccgtggaccaagttgaagaagggc
tcggatgaggagaaggctgaggccgcggcagtcctggtcgcggtgctggaggcggtccgt
atcgtcgcggtgggcctggtcgccctcacacccggcctcagtcgcaggatctactcgcag
ctgggcttctcagaagagcagtttcaggcgctcagctgggcagatacggcgtggggcggg
ctgaaggcggctcatcgaacagctgagccagcacctgtgtttgtgaggctagaggcgccg
ggggaggcggaagcggcggccgaggcggcggcgaaggccaaggcgacagcggcggcggca
gcgactaagcccaagaaggccaagggggggaagggcgcggcagaggacaagaaggccaag
ggggggaagtcgcagcaggggcaggaggcacaggcggcgcaacaggcgcaggagcaagct
gcagtggtgtag
DBGET
integrated database retrieval system
