Volvox carteri f. nagariensis: VOLCADRAFT_83105
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Entry
VOLCADRAFT_83105 CDS
T01330
Symbol
prpS1
Name
(RefSeq) plastid/chloroplast ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
Organism
vcn
Volvox carteri f. nagariensis
Pathway
vcn03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
vcn00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
VOLCADRAFT_83105 (prpS1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
vcn03011
]
VOLCADRAFT_83105 (prpS1)
Ribosome [BR:
vcn03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
VOLCADRAFT_83105 (prpS1)
Bacteria
VOLCADRAFT_83105 (prpS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
S1
eRF1_1
DUF2110
Motif
Other DBs
NCBI-GeneID:
9626290
NCBI-ProteinID:
XP_002955190
JGI:
83105
UniProt:
D8U986
LinkDB
All DBs
Position
Unknown
AA seq
431 aa
AA seq
DB search
MKALSSRSLAQRHALPIRCPKAVCHRSLVAPQLRKATLTTRVAAVEEQQTSFQGDEQPGV
EAAAAPSILDVDPAEEEYELQELDQAQEDLLKWMMLDEETQEEDLDEMVDYDEFGDEEYA
DMYEEVEDMLEAVDYDFKVGDKVSGTVIEVDDDGAYVEIGAKAIAFCPVTECSFARLKTP
LEALRPGMKRDFMVVQDEEEYGQVIVSLAAMEATTFWTRIRQLQEEDITVSVTVESVNKG
GMLVKFGIYDGFIPVSQFGPSITADSMESLIGYELQVKFLEVDEEAERLVFSHKRASSMV
TNDVQGFKVGDVVAGVVQSVKPYGAFIDLGGVTGLLHVSQLSHDRVLVLDKILAEGDKIK
VMILSQDRDRGRVTLSTKKLEPTPGDMLRDPQLVYEKAEEMAEQFRKRVEQAAQSATESA
DLLGEGQPFVY
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgaaggccctttcttcgcgctcgctcgctcagcgtcatgcgctgccgattcgctgccct
aaagcagtttgccatcgtagcttggttgccccccagctgcgcaaggctaccctgaccacg
cgcgtcgccgctgtcgaggagcagcagacatcgttccagggcgacgagcagccaggcgtg
gaggccgcggccgcccccagcattctggatgtggacccagcagaggaggagtatgagctg
caagagctggaccaggcgcaggaggaccttctcaagtggatgatgttggacgaggagaca
caggaagaggacctcgacgagatggtcgattacgatgagtttggcgatgaggagtatgcc
gatatgtatgaggaggtagaggatatgcttgaggctgtggactatgacttcaaggtgggc
gacaaggtcagcggcaccgtcattgaagtggacgacgacggcgcctatgtggagatcggt
gcaaaggcaattgccttctgccccgttacggagtgctctttcgctcgcctcaagacgccg
ctggaggcgctgcgccctggcatgaagcgcgacttcatggttgttcaggacgaggaggag
tatggtcaagtcattgtcagccttgctgcaatggaggccacgactttctggactcgcatt
cgccagctccaggaggaggacatcaccgtgtcggtgacggtcgagtcggtcaataagggt
ggcatgctggtgaagttcggcatctacgatggcttcatcccagtcagccagtttggcccg
agcatcactgctgatagcatggagagcctgatcggctacgagctgcaggtcaagttcctg
gaggtagatgaggaggctgagcgcctggtgttcagccacaagcgggctagcagcatggtg
acgaatgacgtccagggcttcaaggtcggagacgtggtggcgggcgttgtgcaatccgtg
aagccgtacggtgctttcattgaccttggcggtgtcacgggcttgctgcacgtgagccag
ctgtcgcacgaccgcgtgttggtgctggacaagatcttggcggagggtgacaagatcaag
gtcatgatcctcagccaggaccgggaccgcggccgagtgacgctaagcaccaagaagctg
gagcccacgccaggtgacatgcttcgggatccccagctggtgtacgagaaggccgaggag
atggctgagcaattccgcaagcgtgtcgagcaggctgcccagtcggctacagagtccgcc
gaccttctgggcgagggccagcccttcgtctactga
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