Volvox carteri f. nagariensis: VOLCADRAFT_89262
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Entry
VOLCADRAFT_89262 CDS
T01330
Name
(RefSeq) hypothetical protein
KO
K12587
exosome complex component MTR3
Organism
vcn
Volvox carteri f. nagariensis
Pathway
vcn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vcn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
VOLCADRAFT_89262
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vcn03019
]
VOLCADRAFT_89262
Messenger RNA biogenesis [BR:
vcn03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
VOLCADRAFT_89262
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
9623618
NCBI-ProteinID:
XP_002948913
JGI:
89262
UniProt:
D8TR89
LinkDB
All DBs
Position
Unknown
AA seq
238 aa
AA seq
DB search
MAEPMEASTSGCRADGRGLEEFRTVFIKTRVLSQAKGSAYVEFGTTKVMVGVFGPRQSEV
KLGFTDTGRLNCEVRLTSFASHKLAKSGQTQLESSAAQGLQQALEPSVQLDKFPKAVFDV
SAMILEAGGSDLAVLITAASVALADAGVELYDLVPAVQVSKQRGLLLLDPSLEESGAEEG
GMLVGLMPELNEVTALNVRGLWADSEMQEGLELALGGCGQLKAAMREALLTAAVEGGL
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atggcggagcccatggaagcaagcacttcaggttgccgcgccgacggacgtggccttgaa
gaatttcgaacagttttcatcaagactcgcgtcctatcgcaagctaaaggctccgcatac
gttgagtttggaacaacgaaggtcatggttggcgtgtttggaccgcggcaaagcgaggtc
aagctcgggtttacagacacaggacgattgaactgtgaggtccgccttacgtcatttgca
tcacataaactggcgaaatcgggacagacccaattagagagctcagcagcccaaggtctg
caacaagccctagagccctcggtccagctggataagttcccaaaggcggtgttcgacgtt
tctgcgatgatactcgaggccggtggctcggacctggcagtgcttatcaccgcggcatcc
gtcgcgctggcggatgcaggcgttgagctgtacgacctcgtacctgccgtacaagtgagc
aagcagcgtggtctgctgcttctggacccctccctggaggagtcaggagctgaggagggc
ggcatgctggtgggccttatgcccgagctaaacgaggtgacagcgctcaatgtgaggggg
ctgtgggctgactcggagatgcaggaagggctggagctggcgctggggggttgcgggcag
ctaaaggcggccatgagggaggcgctgctgacggcggcagtggagggggggttgtga
DBGET
integrated database retrieval system