Vibrio cholerae O1 2012EL-2176: EN18_17540
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Entry
EN18_17540 CDS
T03389
Symbol
gidA
Name
(GenBank) tRNA uridine 5-carboxymethylaminomethyl modification protein
KO
K03495
tRNA uridine 5-carboxymethylaminomethyl modification enzyme
Organism
vcq
Vibrio cholerae O1 2012EL-2176
Brite
KEGG Orthology (KO) [BR:
vcq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vcq03016
]
EN18_17540 (gidA)
03036 Chromosome and associated proteins [BR:
vcq03036
]
EN18_17540 (gidA)
Transfer RNA biogenesis [BR:
vcq03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
EN18_17540 (gidA)
Prokaryotic type
EN18_17540 (gidA)
Chromosome and associated proteins [BR:
vcq03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
EN18_17540 (gidA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GIDA
GIDA_C_1st
GIDA_C
FAD_oxidored
FAD_binding_2
Pyr_redox_2
HI0933_like
Pyr_redox_3
Thi4
AlaDh_PNT_C
DAO
Pyr_redox
NAD_binding_9
Motif
Other DBs
NCBI-ProteinID:
AIT30810
UniProt:
A0A0F2TTA8
LinkDB
All DBs
Position
1:2554705..2556600
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AA seq
631 aa
AA seq
DB search
MLYHETFDVIVVGGGHAGTEAALAAARTGQRTLLLTHNIDTLGQMSCNPAIGGIGKGHLV
KEVDAMGGLMAQAIDHAGIQFRTLNASKGPAVRATRAQADRALYKAYVRNVLENTPNLTL
FQQAVDDVIVEHDHIRGVVTQMGLKFHAKAVVLTVGTFLGGKIHIGLENYAGGRAGDPPS
IALAHRLRELPFRVDRLKTGTPPRIDANSVDFSVLEAQHGDNPTPVFSFMGKREHHPRQI
PCYITHTNERTHDVIRANLDRSPMYAGIIEGIGPRYCPSIEDKVMRFADKDSHQIFIEPE
GLTTTELYPNGISTSLPFDVQVQIVRSMKGFENAHIVRPGYAIEYDFFDPRDLKQTYETK
YIHGLFFAGQINGTTGYEEAAAQGLMAGLNASLYSQDKEGWSPRRDQAYMGVLIDDLSTM
GTKEPYRMFTSRAEYRLLLREDNADLRLTEKARELGLVDDARWARFNQKIDNMAKERQRL
QETWMNPNSVGVEQLNTLLKTPMSREASGEDLLRRPEMTYELLTTLPAFAPALEDAEAAE
QVEIQVKYDGYIQRQQDEIEKSLRHEHTKLPAELDYKQVKGLSNEVVLKLNAAKPETIGI
ASRISGITPAAISILLVHLKKHGMLKKGEAA
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atgctttatcacgaaacatttgacgtcattgtggttggtggcggtcacgcaggaacggaa
gccgctctcgctgcagcacgtacaggacagcgtacgttacttcttacccacaatattgac
accctaggccaaatgtcctgtaaccctgccattggtgggatcggtaaaggtcatttagtc
aaagaagtggatgcaatgggcggtttgatggcgcaagctatcgatcacgcaggtattcaa
tttcgtacactgaacgcttcaaaagggccagccgtgcgtgcaactcgtgcacaagccgat
cgtgctctgtacaaagcctatgtgcgtaatgtgttagaaaacaccccgaatctcaccctg
ttccaacaagcggtagatgatgtgatcgtcgagcatgatcatattcgtggtgttgtgact
cagatgggcctgaaatttcatgccaaagcggtagtgttaaccgtcgggactttccttggc
ggtaagatccatatcggccttgaaaactatgctgggggtcgtgctggggatccaccatcg
atcgctttggcgcaccgactgcgtgaactgccatttcgtgttgatcgcttaaaaaccggc
acaccaccacgtatcgatgccaatagcgttgatttctcggtattggaagcgcagcacggt
gataatccgaccccagttttttccttcatgggcaagcgtgagcaccatccacgccaaatt
ccgtgttacatcacgcacaccaatgagcgcacccatgatgtgatccgcgctaaccttgat
cgcagccctatgtatgccgggatcatcgaagggatcggcccgcgttactgtccatcgatc
gaagataaagtgatgcgttttgccgataaagacagtcaccaaatttttattgagccagag
ggtttaaccaccactgaactctatccgaacggcatttccaccagcttgccatttgacgtg
caagtgcagatcgtacgttcaatgaaaggttttgagaacgcacatatcgttcgtccgggt
tacgcgattgaatacgacttcttcgatccacgtgatttgaagcaaacgtatgaaaccaaa
tatatccatggtttgttctttgcaggacaaatcaacggtactacaggttacgaagaagcc
gctgcgcaaggcttgatggcgggtctgaacgccagcttgtacagccaagacaaagaaggc
tggagtccacgtcgcgatcaggcgtacatgggcgtgttgatcgacgatctttcgaccatg
ggcactaaagaaccttaccgtatgttcacttcgcgtgcggaatatcgtctgctgctgcgt
gaagacaacgctgatctgcgtttgaccgaaaaagcgcgtgagcttggccttgtggatgat
gcgcgttgggcacgtttcaaccaaaaaatcgacaacatggccaaagagcgtcaacgctta
caagaaacttggatgaatccaaactcggttggcgtcgaacagctcaataccctgctgaaa
acgccgatgtcgcgtgaagccagtggtgaagacttactgcgtcgccctgaaatgacctat
gagctgctgaccactttgccggcttttgcccctgctttggaagatgcagaagccgccgaa
caggtagagattcaagttaaatacgatggctacattcagcgccagcaagatgaaattgaa
aaatcgctgcgccatgaacataccaagctgccagctgagcttgattataagcaagtcaaa
ggtctttcaaacgaggtggtattgaagctcaatgcggctaaaccagaaaccattggaatt
gcatcacgtatttcaggtatcacgcctgcggcgatttcgattttgctggttcacctgaaa
aaacacggcatgctgaaaaagggagaagcggcgtaa
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