Vespa crabro (European hornet): 124432086
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Entry
124432086 CDS
T09462
Name
(RefSeq) CCR4-NOT transcription complex subunit 1 isoform X1
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
vcrb
Vespa crabro (European hornet)
Pathway
vcrb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vcrb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
124432086
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vcrb03019
]
124432086
Messenger RNA biogenesis [BR:
vcrb03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
124432086
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
124432086
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
NOT1_connector
ARM_Cnot1
CNOT1_TTP_bind
DUF3819
CNOT1_HEAT
CNOT1_1st
Motif
Other DBs
NCBI-GeneID:
124432086
NCBI-ProteinID:
XP_046836596
LinkDB
All DBs
Position
23:complement(1095800..1106446)
Genome browser
AA seq
2402 aa
AA seq
DB search
MNLDSLSFTLSQISYLVANLTKKNFRDSCKEISILVQWKGLEADRHLLRSLLSYVDFSTG
EPPESSAKDYFQVQLLKQECTNLLSKPSLISNFCFAIDHPLHHQKTLNSSPKFFLHLKKV
LGLTLVQEVAFAIVLQHSENIDIRALAHEHIKKQLPELIKNYINSETSNKHHEEGLHDSS
PEVLHLILSQVFHIPNQFGVSSEAKEKFLKNLRRDFPRELVPVVLAPLLYPGDGETPQAK
IELNMAVNQMDGNSLVELIMELGYGFTSSVEECRSALAGLGAREISPACVARVLAHMARS
CNSLDDAGGLQSFWGNSASTQDANKEKTSESIAPTTWNVEVFVQALKEIQSTLLWNEVIV
KLDHAEFIIKDRQGLNLLIMGLRLGLQHQGYPPDVFPVELFYRHWENVEGQFSLVQQILK
CPDIFCFADYPYHSVTVDVLKAAPEGDSKEAQTWRSLYVVELLLHMAERGLYGPVQEIFK
WPIQHCPDVLVLALLQINPPITLLRQELLSTLMPIFLGNHPNSAVILHHAWHANNVKIKS
IIMHAMAEWYIRGDHDQTRLSRILDVAQDLKALSALLNAQSFPFVIDLACLASRREYLKL
EKWLTDKIRDHGEVFVAACVKFLHRRCPQVMGPGIKEDPTVPKASQLPQETLTTILACLQ
VCAGSVSQECSEAIMTMVQNCSLMLNKTTMSRPPPPGVLRHRGLEPFNPATLGGQLFSSK
QVDPLGNLSSSLASMGLGSSLGPPSSSAFNLPGALGPLVSAPGSPSRLTGPSPSPFPMLP
LSSQLHSGPVGTQGPSVLPGSTIGGLGRLGPPTGIEKARIPETSNLFPDMPQNVSKEIED
EANSYFQCIYNHPPHPTLSIDEVLDMLKKFQDSGNKREREVFNCMLRNLFEEYRFFPQYP
DKELQITAQLFGGIIERGLVNSYMTLGLALRFVLDALRKPDGSKMYYFGITALDRFKSRL
KDYQTYCEHVRNIQHFSEFPPHLIEYIEYGLQGQEPPTRPQGPVLPKTLAAMLAPVTTPY
KTITTTTITTSTTQAKPSTTPTTSLSARPSIANATNIDTLLVATDKEEKITTPPEALQDK
TAFIFNNLSQLNLQQKCDEIREIVTEDYWPWMAQYLVMKRASIELNFHALYSNFLDCLKL
PEVNKMVTRETFRNIKVLLRSDKGIANFSDRSLLKNLGHWLGMLTLGRNKPILQVDIDLK
SLLVEAYHKGQQELLYVVPFVAKVLESCAKSRVFRPPNPWTMAIMNVLAELHQEPDLKLN
LKFEIEVLCKNLSIDVGELKPAVYLKDPEKLRNLDYQLSHPNKKTEAGNNQQQTQAPIEE
LVGPTTTGTIVAQSAPPANTTPSLPTGPPEPRFSYMDISVTGITNISQHITINNQLPLFQ
THPHLKQFVRPAVERAIQEWIHPVVDRSIKIALTTSEQIVRKDFALDPEEVRMRTAARHM
VRNLTAGMAMITCRDQILASISTNLKQAFLTAMMGTTPQQKELAEQAATVVAADNMELAC
AFVQKTAVEKAIPEMDKRLLNEIELRKIARQEGRRYCDPLAKYQAERMPEQIRLKVGGIT
PQQMAVYEEFARNIPGFLPLSERDTQALFVPKPVTETAVVPFATNPAVAVATAQQVAAYA
AAVSNDEVGAMLEKLAAEVDVLLSAMGPAAPPPQHVALHSLLESIILTRRSRDAGAAMTL
LKKAVEGLLDGPTISSGVTDSEIVLRYRELHLRILKCLQDPRAYGMQWTNKHVTRFLTEC
REDFRYNFEAVDCLIRSHLISLPQYDLALAQAMDASNAMATAFAMQLVQLYLIDERQTTH
VTESDLFHTIEILVRIAHHRAPPEGIPLFRLTSLIESLRANHDPAVLADRAPAGPTAHIH
SGILQVRARDFDDPPGLMEKTEYLLREWVSMHHSPTHARDPTKAFGMFVHQMNIHGILKT
DDLITRFFKLSTQMCVDLCYRALAETNAVPSVVRAKCFHSLDAFVRLVALLVKHSGDTTN
THTKINLLNKVLGIVAGVLLQDHEMRGTDFQQLPYHRIFIMLFLELCAPEPVLEAVNYQV
LTAFCHTLHILRPAKASGFCYAWLELVSHRVFIGRMLAITPQQKCWGMYAQLLIDLFKYL
APYLRNAELAKPVTLLYKGTLRVLLVLLHDFPEFLCDYHYGFCDVIPPNCIQMRNLILSA
FPRNMRLPDPFTPNLKVDMLQEIAHAPRVLTNFASMIQPLSFKKELDSYLKARAPVTFLS
ELRSNLQVSQEAGVRYNIQLMNALVLYVGTQAIAFIRSKGHTPNMSTIAHSAHMDIFQNL
AVDLDTEGRYLFLNAIANQLRYPNSHTHYFSCTLLYLFAEANTEAIQEQITRVLLERLIV
NRPHPWGLLITFIELIKNPTYKFWTHEFVHCAPEIEKLFESVARSCMVQKQVQPTPEPEI
PE
NT seq
7209 nt
NT seq
+upstream
nt +downstream
nt
atgaacctggactcgttgtcttttactttgtcacaaatcagttacttggttgctaatttg
actaagaaaaattttcgggacagctgcaaagaaatatcaattttggtacagtggaaaggt
ctggaggcagaccgacatttgctgcgctctttgctctcttacgtcgatttctcaaccgga
gagccaccagaatcaagtgctaaggattattttcaagtacagcttctaaagcaagagtgt
accaatctgctcagcaagccttctttgatttctaacttctgttttgcaatagatcatcct
ttacatcatcagaagactttgaattcatcgccaaagttttttttacatctgaagaaggta
cttgggctgacgctagtacaggaagttgcttttgcgattgtactacaacattctgaaaat
atcgatattcgtgcattggctcacgagcacattaaaaaacaactacctgaattaataaaa
aattatattaattcggagacaagcaataagcaccacgaggaaggcttacacgattcttcg
ccagaagttttgcaccttatactttcacaggtttttcatattcctaatcaatttggtgtt
tcttccgaagcaaaggaaaaatttctcaagaatttaaggcgcgattttccccgtgaactg
gtaccagtggtgctagcaccactcttgtatccaggcgacggggaaactccgcaagccaaa
attgaattaaacatggctgtcaatcaaatggatggcaattcattagtggagttgatcatg
gaattaggatacggatttactagtagcgtagaagaatgtagatcggcattagctggttta
ggagctagagaaatatctccagcatgcgttgctcgagttttagctcatatggcacgcagt
tgtaatagtcttgatgatgctggaggcttacaatcattttgggggaactctgcttctact
caagatgctaataaagaaaaaacttcagaaagtattgctcccacaacttggaacgttgaa
gtttttgttcaagctttaaaggaaatacaatcaacattattgtggaatgaggtgatcgtg
aaattggaccatgctgagtttatcattaaagatagacaaggattaaatctgctaatcatg
ggcttaagattaggtttgcaacatcaagggtatcctccagatgtgttccctgttgaactt
ttttatcgacattgggaaaatgtagagggtcaattttctttagtacaacaaattttgaag
tgtcctgacatattttgttttgctgattatccataccattcggttactgttgatgtattg
aaagcagctcctgaaggagatagtaaggaagcacaaacatggagatctttgtatgtcgtt
gaactgcttctacatatggctgagaggggtttatatggaccagttcaagaaatatttaaa
tggcctattcaacattgtccagacgtacttgtattagctttattacaaattaatccgcct
ataactttacttaggcaagaattactcagtacacttatgcctatctttcttgggaatcat
ccaaattctgcagtgattttacaccatgcgtggcatgcaaataatgttaaaataaaatcc
attattatgcatgcaatggctgaatggtacatacgtggtgaccatgatcagacaagattg
tctcgcattttagatgttgcacaagatcttaaagcattatcagccttattgaacgcgcaa
tcttttccatttgttattgacctagcatgtctagcatctcgacgagaatatttgaaatta
gaaaaatggttgacagataaaattagagaccatggagaagtttttgttgctgcttgtgta
aaatttttacatagacggtgtccgcaagtgatgggtcctggtataaaagaggatcctaca
gtgccaaaagcaagtcagcttccacaagaaacactcacaactattcttgcttgtttgcaa
gtatgtgccgggagtgtttctcaagagtgttctgaagcaataatgacgatggtacaaaat
tgcagtttaatgttaaataaaaccactatgagtagaccaccaccaccaggggttctaaga
catagaggattagaaccatttaatcctgcgacattaggaggacagttattttcttctaag
caagtagatccacttggaaatttaagttcaagtcttgcttctatgggtttaggatctagt
cttggaccacctagtagttctgcatttaatttgccaggagcattaggacctttagtttca
gcacctggatctccttctagattaacaggaccttctccaagcccatttccaatgttacca
ttatcttcacaactccattctggcccagttggaacacagggtccttctgtattacctggt
agtacaataggaggattaggacggcttggcccaccaactggtatagaaaaagcaagaata
ccggaaacatcaaatctgtttcctgatatgcctcaaaatgtatctaaagaaattgaagac
gaagcgaatagctattttcaatgtatatacaatcatccacctcatcccacattgtcaatt
gatgaagttcttgatatgctcaaaaaatttcaagattcaggaaacaaaagagaaagagag
gtattcaattgtatgcttcgaaatttattcgaagaatatcgtttttttcctcaatatcca
gataaagaactgcaaataactgcacaattatttggtgggattattgaaagaggtttggtt
aatagctacatgacacttggattggcacttagatttgttttggatgctttgagaaagcca
gatggtagtaaaatgtattactttggtataacagctttggatcgttttaaaagtcgtttg
aaagattatcaaacatattgcgaacacgtgaggaacatacagcattttagtgaatttcca
ccacatttaatagagtatatagaatacggtctacaaggacaagaacctcctactcgacct
caaggtcctgtccttccaaaaacattagctgctatgttagctccagttacaacaccatat
aaaactattacaacaacaactataacaacaagtactactcaggctaagccttctacaaca
ccaactacttcactttctgccagaccctctattgcaaatgcaactaatattgatacgttg
cttgtagcaacggataaagaggaaaaaattacgacaccgcctgaagcgttacaagacaag
actgcatttattttcaacaatcttagtcaacttaatttacaacaaaaatgtgatgaaatt
cgagaaatagttactgaagattattggccttggatggcccaatatttagtgatgaaacgt
gctagcattgaattaaattttcatgccttatattctaatttccttgattgcttaaagctt
ccagaagttaataaaatggtaactagagaaacattcagaaatatcaaggtattattacgg
agtgataaaggaatagcaaatttttctgatcgatctcttttaaaaaacttggggcattgg
cttggaatgttaacccttggtagaaataaacctattttacaggtggatattgatttaaaa
agcttgttagtagaagcatatcacaaaggtcaacaagaacttctttatgttgtacctttt
gttgcaaaagtcttggaaagttgtgcaaaaagtcgtgtttttcgtcctcctaatccatgg
acaatggcaattatgaatgtgctagcagaacttcatcaagaaccagacttaaaattaaat
ttaaaatttgaaattgaagtgctttgtaaaaacttaagcatcgatgttggagaattaaaa
ccagcagtttatttaaaagatcctgaaaaattacgtaacttggattatcaattatcacat
ccaaataagaaaacagaagcaggaaataatcaacaacagacacaagcccctattgaagaa
ttagtcggacctacaacaacaggaactattgttgctcaatcagcacctcctgctaacact
acaccatctttacctactggaccaccagaaccacgttttagttatatggatatatctgtt
acaggcattaccaatatctctcaacatatcaccataaataatcaactacctttgttccaa
acgcatcctcatttaaaacaatttgttcgtcctgctgttgaaagagctatacaagaatgg
attcatccagttgttgatcgatctattaaaatagctttgactacaagtgaacaaatcgta
aggaaagactttgctttggatcctgaggaagtaaggatgcgaacagcagcacgtcatatg
gttcgtaatttaactgctggaatggctatgattacatgtagagatcagattttagcatca
ataagtacaaatttaaagcaagcctttctaacagctatgatgggtacaactcctcagcaa
aaagaattagcagagcaagctgcaactgttgtagctgccgataatatggaacttgcttgc
gcatttgtacaaaagactgctgttgaaaaagctatcccagagatggataaacgtttactt
aatgaaatagaattacgaaaaattgcacgacaagaaggaagaagatattgtgatccttta
gctaagtatcaagctgaaaggatgccagaacagattcgattaaaagtaggcgggataact
cctcaacaaatggccgtttatgaagaatttgccagaaatatacctggattcttaccatta
tctgaaagagatacacaagcactttttgtgccaaaaccagtaacggaaactgcagtagtt
ccgtttgctactaatccagctgttgcagtagcaacggctcaacaagtagctgcatatgca
gccgctgtaagtaacgatgaagtaggagcaatgttagaaaaacttgcagctgaagtagat
gtattgctttctgcaatgggtccagctgcaccacccccacaacacgtagcacttcatagt
cttttagagtctatcatccttactagaagatcaagggatgcaggtgctgcaatgacgctt
ctaaaaaaagctgtagaaggattactagatggtcctactatttctagcggagtgacagat
tcggaaatcgttttgcgttatagagaacttcatttacgcattctgaaatgtcttcaagat
ccacgtgcttatggtatgcagtggacgaacaaacatgttacccgtttcttaacagaatgt
agagaagattttcgttataatttcgaagccgtagattgtttaataagatctcatttgatc
agtcttccacaatatgatttagctctagcacaagctatggatgctagtaatgctatggca
actgcgtttgctatgcaattggttcaactatatctcattgatgagagacaaacgacacat
gtaacagaatctgatctgtttcatacgattgaaatacttgtaagaatagcacatcataga
gccccaccagaaggaattccactctttagacttactagtctaatagaatcgttacgtgca
aaccatgaccctgcagtattagccgatcgtgctcctgcaggaccgacagcacacatccac
tctggaattctccaggtgagagcccgtgatttcgatgatccaccaggattaatggagaag
accgaatacttattacgtgaatgggtttcaatgcatcatagtcctacccatgctcgtgat
cctactaaagcatttggaatgtttgtccatcaaatgaacattcatggcattttaaaaact
gatgacctcataactagattttttaaattaagcactcaaatgtgcgtggacctttgttat
cgtgcattggctgaaaccaatgcagttccttctgttgttcgcgcaaaatgtttccactcg
ttagacgcttttgtgcgcttagttgcgctcttagtcaaacattctggcgacacaacaaat
actcatacgaaaatcaacttattaaacaaagtacttggaatagttgctggagtgttactg
caagatcacgaaatgcgtggtacagatttccagcaattaccttatcatcgaattttcatc
atgctctttttagagctttgtgcccctgaacctgttttagaggcagtcaattatcaagtt
ttaacagccttctgtcatacgttacacatattgagacctgccaaagcttcgggcttttgt
tatgcctggttagagcttgtttcgcacagggttttcattggacgtatgctcgctattact
ccacaacaaaaatgttggggaatgtacgctcaacttctcatcgatttatttaaatatcta
gcaccgtatctgcgtaatgcagaactggcaaaacccgtaacgcttctatataaaggtact
cttcgggtgttactggtattactacatgattttcctgagttcctttgcgattatcattat
ggattttgtgacgtaattccaccaaattgtatacaaatgagaaatctcattttaagcgca
tttccaagaaatatgcgcttacctgatccgttcactccaaatttaaaagtcgatatgctt
caagaaatcgcacacgctcctagagtgcttactaattttgcttcgatgattcaaccactc
agttttaaaaaggaattagattcttatttgaaagcccgtgctccggtcacctttttgtca
gaattacgtagtaatttacaagtctcacaggaagctggtgtaaggtataatattcaattg
atgaacgctttggttctttacgttggaacacaagctattgctttcatacgcagtaaaggt
catacacctaacatgtccacgattgcacattccgctcacatggacatatttcaaaatctt
gctgttgatctcgataccgaaggtcgttacttatttttaaatgcaattgctaatcagctt
cgctatcccaatagtcatacgcattatttcagttgtacacttctttatttatttgccgaa
gctaataccgaagctatacaggaacaaattacgagggttcttcttgaaagacttattgtc
aatagacctcatccttggggtcttcttattacattcatcgaactcattaagaatcctaca
tacaaattctggacgcacgagtttgttcattgtgctccagaaattgaaaaattgttcgag
tctgtagctcgatcatgtatggttcaaaaacaagtgcagccgacacccgaaccagagatt
ccggagtga
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integrated database retrieval system
