Venatoribacter cucullus: GJQ55_06025
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Entry
GJQ55_06025 CDS
T07641
Symbol
kdsB
Name
(GenBank) 3-deoxy-manno-octulosonate cytidylyltransferase
KO
K00979
3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:
2.7.7.38
]
Organism
vcw
Venatoribacter cucullus
Pathway
vcw00540
Lipopolysaccharide biosynthesis
vcw01100
Metabolic pathways
vcw01250
Biosynthesis of nucleotide sugars
Module
vcw_M00063
CMP-KDO biosynthesis
Brite
KEGG Orthology (KO) [BR:
vcw00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
GJQ55_06025 (kdsB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
vcw01005
]
GJQ55_06025 (kdsB)
Enzymes [BR:
vcw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.38 3-deoxy-manno-octulosonate cytidylyltransferase
GJQ55_06025 (kdsB)
Lipopolysaccharide biosynthesis proteins [BR:
vcw01005
]
Lipid A
GJQ55_06025 (kdsB)
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GFIT
Motif
Pfam:
CTP_transf_3
NTP_transf_3
NTP_transferase
ADH_zinc_N
BTH_I2711-like
Motif
Other DBs
NCBI-ProteinID:
QQD24063
UniProt:
A0A9X7UW94
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Position
1284542..1285312
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AA seq
256 aa
AA seq
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MADYKIVIPARYASSRLPGKPLLMLAGKPMIQHVYERAVATGATDIIIATDDERIRDVAA
GFGAEVVMTSPDHENGTERIAEVARIKQWPAEAVVVNLQGDEPLIPQSLIALTAQGLIQH
PQAGMSSVCTALKHDADAFNPNVVKVVLDQQQFALYFSRASIPWDRDAYKNGTGMMTTKI
PVYRHIGMYGYRVSFLQQYTAMQPCALEGTEALEQLRALWYGVKIHMAIIDEAPGHGVDT
PDDVARVEAMLQALNT
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atggccgactataaaattgtgatacctgcccgttatgcctccagtcgtttaccgggtaaa
ccgctgctgatgctggccggtaagccgatgattcagcatgtgtatgagcgtgctgtggcc
accggtgcgaccgatattattattgccaccgatgatgagcgtatccgcgacgtggctgcc
gggtttggcgccgaggtggtaatgacgtcgccggatcatgaaaacggcaccgagcgtatc
gccgaagtggcccgcattaaacagtggccggccgaggcggtggtggtgaacctgcagggc
gatgagccgttaattccgcaaagtctgattgccttaacggcgcagggtttaattcagcat
ccgcaggcgggtatgagttcggtctgtaccgcgctgaaacacgatgccgatgcctttaac
ccgaacgtcgtgaaagtggtgttggatcagcagcaatttgcgttgtatttcagtcgtgca
tcgattccctgggatcgggatgcgtacaaaaatggcacgggtatgatgaccacgaaaata
cctgtctaccgtcatattggtatgtacggttatcgggtgtcctttttgcagcaatacacc
gcgatgcaaccctgtgcgctggaaggtaccgaagcgctggagcaattacgcgcactttgg
tacggcgtaaaaattcacatggccattattgatgaagcgccggggcatggtgtggatacg
ccggacgatgtcgcccgggttgaagcgatgttgcaggcgttgaatacctga
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