KEGG   Vibrio cholerae O49 1154-74: VAA049_608
Entry
VAA049_608        CDS       T03828                                 
Symbol
ribD
Name
(GenBank) riboflavin biosynthesis protein RibD
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
vcx  Vibrio cholerae O49 1154-74
Pathway
vcx00740  Riboflavin metabolism
vcx01100  Metabolic pathways
vcx01110  Biosynthesis of secondary metabolites
vcx01240  Biosynthesis of cofactors
vcx02024  Quorum sensing
Module
vcx_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Brite
KEGG Orthology (KO) [BR:vcx00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    VAA049_608 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    VAA049_608 (ribD)
Enzymes [BR:vcx01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     VAA049_608 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     VAA049_608 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam Inv-AAD
Other DBs
NCBI-ProteinID: AKB02419
LinkDB
Position
664576..665679
AA seq 367 aa
MPMFTSFDHQMMSRAIELAWRGRFTTSPNPNVGCVITRGEQIVGEGFHFRAGEPHAEVHA
MRQAGELTRGATAYVTLEPCSHYGRTPPCAEGLIKAGVAKVICAMQDPNPQVAGKGVQML
RDAGIEVEVGLLEADARALNRGFLKRMETGMPFVQLKMAASLDGQTALANGKSQWITSPA
ARKDVQRFRAQASAILSTSQTVLADNASLAVRWHDLPSSVQAQYAEADLRQPLRVILDRQ
HQLHPELALYQTPSPVLRVASENAELCISAENGKLDLRELLAQLAQQHNVNQLWVEAGSQ
LAKSLIEQKLVDEIILYLAPKLMGSDGRGLFGALGLTEMAEAIELKIEDCRMVGADLRII
ATPKTKD
NT seq 1104 nt   +upstreamnt  +downstreamnt
atgcctatgtttacctcttttgatcatcaaatgatgtctcgcgcgattgaacttgcgtgg
cgcgggcgttttaccacttctcctaatcctaatgtcggctgcgtcatcactcgcggtgag
cagattgtaggggaaggtttccattttcgtgcgggcgaaccccatgctgaagtgcatgcg
atgcgccaagccggtgagcttactcgcggtgcgaccgcttatgtcaccttagagccttgt
tctcattatggtcgcacaccgccttgtgctgaagggcttattaaagccggggttgcgaaa
gtgatttgcgcaatgcaagaccctaacccacaagtggcggggaagggcgtacaaatgctg
cgtgatgccgggattgaggttgaagtggggttgctggaagcggatgctcgagcactcaac
cgcggttttctaaaacgtatggaaaccggcatgccttttgtgcagcttaaaatggcggcg
agtctagatggacaaaccgcgctcgctaacggtaaaagccagtggattacttctcctgca
gcacgtaaagatgttcagcggtttcgcgcgcaagccagtgcgattctctccaccagtcaa
acggtgctggcagataatgcttctctggcggtgcgttggcacgatttaccgtcatcggta
caggcgcaatacgcagaagcggatttgcgtcagccgctgcgggtgattttggatcgccaa
catcaattgcatccagagttagcgttataccaaacaccttcacccgtgctgcgagttgcc
agcgagaatgccgaactctgtatctctgctgagaacggaaagcttgatttgcgtgagctt
ttggcacagctcgctcagcaacacaatgtgaatcaactctgggtagaggcggggagccaa
ttagcgaaatccttgattgagcaaaagttggtggatgaaatcattctctatttagcgccg
aaactgatgggcagtgatggccgtggtttatttggcgcgctcggtttgacggaaatggct
gaggccattgaactcaaaatagaagattgtcgaatggtgggggcagatttgcggatcatc
gccaccccaaaaacaaaagattag

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