Vibrio coralliilyticus RE98: IX92_14510
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Entry
IX92_14510 CDS
T03444
Symbol
cpdB
Name
(GenBank) 2', 3'-cyclic nucleotide 2'-phosphodiesterase
KO
K01119
2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:
3.1.4.16
3.1.3.6
]
Organism
vcy
Vibrio coralliilyticus RE98
Pathway
vcy00230
Purine metabolism
vcy00240
Pyrimidine metabolism
vcy01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vcy00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
IX92_14510 (cpdB)
00240 Pyrimidine metabolism
IX92_14510 (cpdB)
Enzymes [BR:
vcy01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.6 3'-nucleotidase
IX92_14510 (cpdB)
3.1.4 Phosphoric-diester hydrolases
3.1.4.16 2',3'-cyclic-nucleotide 2'-phosphodiesterase
IX92_14510 (cpdB)
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Motif
Pfam:
5_nucleotid_C
Metallophos
PGA_cap
Motif
Other DBs
NCBI-ProteinID:
AIW20163
UniProt:
A0A7Y3YYT9
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All DBs
Position
1:3115584..3117545
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AA seq
653 aa
AA seq
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MKVAVKPLSLAVLGGMLTMAGPAMAETIKLRIVETTDIHTNVMDYDYYKDKPTQKTGLTR
TATLVKQAQAEVENSVLVDNGDLIQGSPMGDYMADKGIKPGEVHPVYKAMNQLNYDVGNI
GNHEFNYGLEFLAETINDADFPYISANVFDKKTGKHYFKPYIIKTHTFKDVDGVEHEIKV
GYIGFVPPQIMVWDKKNLEGKVFAKDIKETAEELVPQMKKEGADVIVAIPHSGVASDPYK
AGAENSTYYLSEVEGIDAIAFGHSHAVFPGKGFDNIQGVDNQKGTINGVASVMPGRWGSH
VGVIDLELKEQDGKWSVVTGQAEARPIYDKVAKKSLAKADPDMVKALEADHKGTRDFVNQ
PIGKANDVMYSFLALVQDDPTVQIVNLAQKDYVERFIQGDPDLSDIPVLSAAAPFKAGGR
KNDPANFTEVESGQLTFRNAADLYLYPNTLVAMKVKGKEVKEWLECTAGQFQQIDVNSTA
PQQLIDWDGFRTYNFDVIDGVEYQIDVTQPAKYDGDCKLVNEGAERIVGLTYQGKPIDME
QDFLIATNNYRAYSNKFPGTGSEFVAFDSPDENRSVIASYISRVSKEKGEVTPSADNNWT
FAPIKSDNKLDIRFETSPSDKAADFIEKKGQYPMKQVATDDVGFAVYQIDLQK
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtcgcagtgaaacccctttcgcttgctgtactgggtggcatgctaactatggct
ggcccagcaatggcagaaacgatcaaattacgtatcgtagaaaccacggatattcacact
aacgtcatggactacgactactacaaagataaaccgactcaaaaaaccggtctgacacgc
acagcaacgctggttaagcaagctcaggccgaggtagagaacagcgtactggttgataat
ggtgaccttatccaaggtagccctatgggtgactacatggccgacaaaggcatcaaacca
ggtgaagtacaccccgtctacaaagcaatgaaccagctaaactacgatgtcggtaacatt
ggtaaccacgagtttaactacggtctggagttccttgcagaaaccatcaatgacgctgac
ttcccatacatcagcgccaacgtgtttgataagaaaacaggcaagcactacttcaagcca
tacatcatcaaaactcacactttcaaagacgtggatggtgtagaacatgaaattaaagtg
ggttacatcggcttcgttccaccacaaatcatggtatgggataagaaaaacctagaaggt
aaggtatttgccaaggacatcaaagagacagcagaagagcttgtcccgcagatgaaaaag
gaaggcgctgatgtcatcgttgccattccacactctggcgtagcatctgacccttacaaa
gcaggcgcagaaaactcaacttactacttatcagaagtcgaaggcattgatgcaatcgcc
tttggtcactcacatgctgtcttcccgggtaaaggttttgacaacatccaaggtgtcgat
aaccaaaaaggtaccattaacggtgtcgcttcggttatgcctggacgctggggcagccac
gttggtgttatcgacctagaattgaaagaacaagatggcaagtggtcagttgtgacaggt
caggcagaagcccgtcctatctacgacaaagtggctaagaaatctcttgctaaagccgat
cctgacatggtgaaagcgttagaagcagaccataaaggtacgcgcgatttcgttaaccag
ccaattggtaaagcaaacgacgtgatgtacagcttccttgctctagtacaggatgatcca
accgtacaaatcgttaaccttgcacagaaagattacgtggaacgctttattcaaggcgac
cctgatctttcagatattccagtcctttctgcagccgctcctttcaaagctggtggtcgt
aagaacgatccagcaaactttactgaagtcgaatccggccagctgaccttccgtaatgct
gcagacctttacctttacccgaacacgcttgtcgcaatgaaggtcaagggtaaggaagta
aaagagtggctagagtgtactgctggtcaattccaacagattgatgttaacagcactgca
ccacagcagctgatcgactgggatggcttccgtacttataacttcgacgtcattgacggt
gttgagtaccagattgatgtaactcagccagcgaaatacgatggtgactgtaagctagtc
aacgaaggcgctgaacgtattgttggtttaacttaccaaggtaagccaatcgatatggaa
caagacttcctgatcgcgaccaacaactaccgtgcctacagcaacaaattcccaggcact
ggtagtgagtttgtggcgtttgattctccagacgaaaaccgctctgttattgcgtcttac
atcagccgagtaagtaaagagaaaggcgaagtaacaccaagcgcagacaacaactggaca
ttcgctccaataaagtctgacaacaaactggacatccgctttgaaacctcaccaagtgac
aaagcagcggacttcattgagaagaaaggccagtacccgatgaaacaagtcgcaacagac
gatgtaggcttcgcggtttatcagatcgacctacaaaagtaa
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