Vibrio cholerae O27 10432-62: VAB027_112
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Entry
VAB027_112 CDS
T03829
Name
(GenBank) EAL domain protein
KO
K20964
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
vcz
Vibrio cholerae O27 10432-62
Pathway
vcz05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vcz00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
VAB027_112
Enzymes [BR:
vcz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
VAB027_112
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Paralog
GFIT
Motif
Pfam:
EAL
FIST
FIST_C
GGDEF
DUF6662
Motif
Other DBs
NCBI-ProteinID:
AKB07059
LinkDB
All DBs
Position
116363..118852
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AA seq
829 aa
AA seq
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MFTVSRLIPDLASANQVLETMDLPHGQSILVQIFSPLSREHVVQLARLIRSRHPQACLLG
CSTEEVIFQGEVHHQVTLLQITVFEQTYLSRAVVDYSDDEAADAERLARQLELTSTSRAV
VCFSWQMDTLQAARFALRDTQGAPVPVAGGAAKQTPSGRWVLLDEACYQNASVAIALHGE
ALYVETGGYTEWQPVGRTYRVTAVEGDRVLRLDDEPIEAIYQRNLGAQADLPHDWLISFP
LMKGECRHQDLYLPLGLAEEGGLRFNRPLALQDEVRFCFDHPSLTLERVYLTAQQLQAKQ
CQQVWVFNCALRLNFMHENHELQPLQAVAPTDGCYCWGELLYEHGQQQVMHHSMTFLALR
EGAVRDDLVPIPLPSYPEGMTSPLFNLIRHSFHDLDAMTDNLAQQIRAQTSLLTASYRRD
RRTGLPNRVVLRERLANFAANEHLIALKVTNFNQINEKYGYPVGDKLLRDLSEQFQVFLD
QKLAGQSGLYAIGVGEWATVFRAKLDGKSIHSHFYQFVEQLEHVNFEPYGLPNVDYLSIS
LCAGLVSQGDFAEHSPDELLLRAIEARRYAFNNNHHFCNAARLKVQESVRQERLNWLSRV
SRAVVRDDVVVYAQPICQARSHIVASYECLVRIEDEGEIILPGNFLPIITDTHLYTRLSR
QMITHTFNMMRHRPEAFSINLSPQDLMSERTLQHLEAAIKSVADPARVGLEVLESEQIKD
YGRMIEVCNHFRTLGATIIVDDFGSGYSNIDEIVKLEPQVIKLDGSLIRNIDQDVKQRRI
AEQLVKLCQVLNAKTVAEFVHNQTVCRISEDMGVDYLQGYFLGRPSRLG
NT seq
2490 nt
NT seq
+upstream
nt +downstream
nt
atgtttacggtctcgcgtctcatcccagatttagcatcggccaatcaggtgctcgaaacg
atggatcttcctcatgggcaatccatcttagtgcaaattttctctcctttgagtcgcgag
catgtcgtgcagcttgcgcggctcatccgtagccgccatccacaagcttgcctgcttgga
tgcagtaccgaagaggtgattttccaaggggaagtacaccatcaggtgacgttgctgcaa
atcaccgtgtttgagcaaacttatcttagccgtgccgttgtggattacagtgacgatgag
gctgccgacgcggagcgtttagctcgccagctcgagctcactagcacgtctcgagcggtg
gtgtgtttttcttggcagatggataccttgcaagccgcacgatttgccttacgcgacacg
cagggtgcgccagtgcccgtcgctggtggagccgccaaacaaactcccagtggtcgctgg
gttttgctcgatgaggcttgttatcagaacgccagtgtggctattgcgctgcatggcgaa
gcgctttatgtcgagacgggtggttacactgagtggcagcctgttgggcgcacctatcgg
gtcactgccgtggagggtgatcgggtcttacgtttggatgatgagccgatagaggcgatt
tatcagcgcaatttgggcgcgcaagccgatttaccgcatgactggttgatcagttttcca
ctgatgaaaggggaatgccgccaccaagatctttatctgccgctcgggctggcggaggaa
ggcggactgaggtttaaccgcccactggcgctgcaagatgaagtgcgcttttgttttgat
cacccgagtttaaccctagagcgggtctatctcaccgctcagcagctgcaagccaagcag
tgtcaacaagtatgggtgtttaactgtgcgctgcgtttaaacttcatgcatgagaatcac
gagttacaaccgctccaagcggtggcgccgaccgatggttgttactgttggggagagctg
ctgtatgagcatggtcagcagcaagtgatgcatcatagcatgacgtttcttgccttgcgt
gaaggggcggtgcgtgacgatcttgttccaatccccttgccgagttatccggaagggatg
acgtcccctctgtttaatttgatccgccattcatttcacgatttggatgccatgacggac
aatttggcgcagcagatccgcgctcaaacctcattactgacggcgagttaccggcgtgac
cgacgtaccggcttacccaatcgagtggtgttacgtgagcgattggcgaactttgcggcc
aatgagcacctaatcgccctgaaagtgaccaacttcaatcagatcaatgagaagtacggt
tatccggtaggcgataagctgcttcgtgatttgagtgaacagtttcaggtctttttggat
cagaaattggcagggcagagcggtttgtatgcgattggagtcggcgagtgggcaacggtt
tttcgtgccaagctggacgggaaaagtattcatagccatttctatcagtttgtggagcag
ttggagcacgtcaacttcgagccctacggtttaccgaatgtggattatctgtcgatctcg
ttgtgcgctgggttagtcagtcagggcgattttgcagagcattcgccggatgagctattg
ctgcgtgctatcgaagcacgccgctacgcgtttaacaacaaccaccatttctgtaatgca
gcgcgtttaaaagtgcaagaaagtgttcgtcaggagcggctgaattggctatcgcgggtt
agccgcgcggtggtacgtgatgatgtggtggtttatgcgcagccgatttgtcaggcgcgc
agtcacattgtggcttcctacgaatgtttagtgcggattgaagatgaaggggaaattatc
ttgcctgggaattttctcccgatcatcaccgatactcacctctatactcgtttgagccgg
cagatgataacgcataccttcaatatgatgcgtcatcgcccggaggcgttttcgatcaat
ctttcaccgcaagatttgatgagtgagcgcaccttgcagcatttggaagcggcaatcaaa
tcggtggccgatcctgcccgtgtcgggctcgaagtgttggagagcgaacaaatcaaagat
tacgggcggatgattgaagtgtgtaaccatttccgcacactgggcgcgaccatcattgtc
gatgattttggcagtggttattccaatattgatgagatagtgaagcttgaaccgcaggtg
attaagctcgatggcagcttgatccgcaatattgatcaggatgtgaagcagcgccggatt
gccgagcagctcgtgaaattgtgtcaggtactgaatgcgaaaaccgtggcggagtttgtc
cataaccagacggtttgtcgcatcagtgaagatatgggggtggattatttacaaggctat
ttcttgggtcgaccttcccgcttgggttaa
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