Varroa destructor (honeybee mite): 111246658
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Entry
111246658 CDS
T07383
Name
(RefSeq) CCR4-NOT transcription complex subunit 1-like
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
vde
Varroa destructor (honeybee mite)
Pathway
vde03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vde00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
111246658
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vde03019
]
111246658
Messenger RNA biogenesis [BR:
vde03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
111246658
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
111246658
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
CNOT1_TTP_bind
DUF3819
CNOT1_HEAT
NOT1_connector
ARM_Cnot1
Motif
Other DBs
NCBI-GeneID:
111246658
NCBI-ProteinID:
XP_022652338
UniProt:
A0A7M7JIU6
LinkDB
All DBs
Position
Unknown
AA seq
2814 aa
AA seq
DB search
MHCDPCKAPVQANTLYRVKYQSTPTSSSSSSTTSSQSSLLLTAASTSSTGPSNNNNNNVF
PKPVSRSLALQSGEIFERREILRALLQRASAIARDPGKDENTRQHVRASLEAALCPSLNG
LTNAHNVAIARAALRKPLGEVALDSPTSSKVSAASVSTTEDSTPGTARSLVTDYGVKRAS
VRSIVNTICSGLPLNVEAQLTLELALCSAVGPCISGTRGEVVGLKASNEHLQLKVESILE
SVEAKQLLSALPCDLLEAICCSVDLPLRRRLVQVIGNRQQLRYLSEQASSPFLLRALLSV
NGDCALSRRLDIQPLPFEQRSPGRGDNRQEDAEDLVNRLLTAMAARNSTLMEASTADKYI
AEVGRSLTSSAEKCENEIREFSRVIGMTGAKFVANLISAMCKSHFPAGNDDPVWMSPSNV
LTGGWPGQKDTQGGGQTSGVVGGGPQEALDWNVDVLFRAIIAVESGLDWKEVVRQFDNPN
FLVKDRAGLRFLWQVLTKAFDDVQRIPMDIIYGKWQNCEGQFFLLKQMLTCPDIVKLTEC
LPCTKPEPVVAQEKPSGGGGTGPGHDEDSNPLFVNWKVMEVHDTLMTLCDRPELHNEVQN
LYKAAKESSHDTITIALLQVKSPMTPGRRILLKDLMQHYLGGGAHNAQTILHFAWSGSAA
QPMQQEMHKIVKEAMVEYYTSGDGESSRLTRILELAQEIKCLQSLLASARTLDAVGQVGI
QNTITFAIDLACLASRREYLKLDKWMADNLSANIETFMPACVSFLQRKVPYLVGKPGETG
AHLITQECVHTMLATMLSQGPLIKDEKLKMRLAEVFDQVQNMMENFNVIGGKRRPGGGPQ
PPHPPPPAHMSTGQVPPGNFHHPHPQHHPVNLGQPPHLPPPPAQPQSDMLGFRNPPTAMQ
PHYSTGPNRSNQTPGQVFGPGGPQTHAGPMTLMGGPMGGAAALTAAAPPTTEEFLQSGDL
TRVHVSKETEDEANSYFQKIYNQPQIKTETIKEFLDMLKRFSNSNKPNEREVFQCMIRNL
FEEYRFFPSYPDKELTITAQLFGGIIDYELVRYQTLTMAHKFVVDAIKKPQNMKMFYFGI
VALDCFKTKIRANPSFCQLLHSCPTFSMFPEHLQLWVECGMKGQEPPGKPKGVMPLLNNG
KLAHSNPQQGVKKSTVLATGGKPSIAAATNIDTLLGASDKVEKIIEPSEHTADKIGFIIN
NLSQANVQQKSEEFRELVSEELFPWFARYMVVKRASIEANFHSLYVNFLDTINSQTLSAL
TLSETYRNIRVLLRSDKDVSDFTDRALLKSLGHWLGLLTIARNRPILTLDIDLKALLIEA
YHKGLQDLLYVVPFIAKILESAVKSKIFRPPSPFTMGLVYALVELHSEQGLKLNLKFEVE
VLCKALCLDVQQVKEDAIRRGCFHVLKDHGKLALLDSPLLGPPPISQNPPNVSVSAPQMS
APPQVTSGPPHPHVAGQPAPKVNEIIPMMQQFNMQNAGTGGGANTSMVPGSGMMHGQSGP
PEEFLQQQHQQQQQQQQQQQQQQQMGVGVPGVAPQNTQAGQAAIMSQGQQVSNNLTQAQL
MQQQQQPPTPQYSLREFNAVTPNMLPSLISIPPNIPLFQTHPNLKLHVRNSVEQSIQEWM
KPVVERCLKIALVTCENIVKKDFALEPDENKMRLSLHNMVRAVTAAMVIVTCKEPLFITI
TNNAKKLLRDALNMIASQGQMPFNSKEQHIDQAANAIANENVELATCFIQKTAIEKAVNE
ADKKFSAEYEARKVARKEGKVYCDHNALSYQERMPEILRLKLGGTPAPQMAVYEEFARNV
PGFASSPGPGERPGVGQFAGAGQHDARSAEAYFAGQFANQSGQPAQKMPQAQAQPQPMMM
PPRVPQIEDNASGGGLVEKMFLELEMLVSYITTHMSNTIPQAMPAASQLAMNVHVVQEAL
QVYRQSNYELSAGYMVVHKTMESLLEGLFILNHPTLSHLEGGHGHPHPSDWSNKYRETHV
LVLKVLADRSLLGFNMKLPSIVAKVLLEHPNEEARYNLAVFDALLRSNLLFVPLFDVQLA
SLLDQSVSFAALAFAKDLVRVVNSYRESGVLPEADMPHTLEAIYHHRRLPPPLPPQTNPQ
QQQPPQQPPQQQQAPLTQHQQQQRQQQQQQQPLNPNPLGEEFGGGGPELMLGQRPFAGGP
GGQGNQLEYNSPPMAMMHSGMSEARNPENDPPDLQTKTECLLQDWVSMYSSSHGKDSTKN
FQLFVQQMNMQGILKTDDLITKFFRLSTEMCVEHTYRQTTKAVQQVNQQAALSPSQPAGG
DGLSGSSAISATHNSPALAAHQCVNVARNKCFLTLDAYVRLIAMLVKHSGDQSNPITKVN
LLNKVLGIIAGVLVHDHETRASEFRQLAYHRMFLMLFLELTAPEPILEVFSFQTLMAFCN
TLHMLHPSKVPGFAFAWLELISHRMFLARMLAITPQQKAWGMFAQLLQDLFKFLSPFLRN
MELTPPVHLLYKGTIRVLLVLLHDFPEFLVDYHHGLCDLIPANCVQMRNLILSAFPRHMR
LPDPFTPLLRVETIPECMHLPRILPNYTTMIQSLPLRKDLDAFLKTRQPAGIVAELIDAL
LVQSNAQGSSGPNEAGSRYNIPLVNALVLYVGSQAIAMMQPQTQQQPYHFTEAGGRTPAG
QKPLGGPQAGQGNSIPLTWQCVARTPHAELFEQLMAKMDNEGRYLVLNAIANQLRFPNAH
TAYFSALTLALFAGLQDIQSVNAEEEGEAGIVSRQTMTPAMANVVREQITRVLLERLIVN
RPHPWGLLVTFVELLKNTQLNFWKYEFIRCAPEIEKLFDSVARSCVGPKPVGSD
NT seq
8445 nt
NT seq
+upstream
nt +downstream
nt
atgcactgtgatccctgcaaggcccccgtgcaggccaataccctctatcgtgttaagtac
cagtctacgccgacttcatcatcatcatcatcaacaacatcttcacaatcatcattatta
ttaacagcagcgtcgacgagtagtacggggccatcgaacaacaacaacaacaacgttttt
ccgaaaccggtatcgagatcattagctttacaaagtggtgagatttttgaacggcgtgag
atacttcgcgcgcttttacagcgtgcctcggcgatcgcgagagatcccggaaaagacgag
aacacccgacagcacgtgcgcgcttctctggaggctgcactgtgcccttcgttaaacggg
ctcacaaacgcgcataacgttgcaatagctcgagccgctctccgcaagccccttggtgaa
gttgctctagactcaccaacatcgtcaaaagtttctgctgcatctgtaagcactacagag
gactcgactcccggaaccgcccgttccttagtcactgattacggagtcaagcgagcgtcg
gtcagaagcattgtcaacactatctgttctggacttccactaaacgtagaggcccagcta
acacttgagttagcgctgtgcagtgctgtaggcccctgtatcagcggtacgaggggagag
gtagtcggtttaaaggcaagcaacgaacatctgcagttgaaggtcgaatccattctcgag
tccgtcgaggccaaacaattgctctcggctttaccctgtgaccttctcgaagcaatctgc
tgctctgttgacctgccgctgcgcagaagacttgtgcaggtaatcggcaaccgacagcag
ctgcggtatctatctgaacaagcgagctcgccattcctcctgcgtgctctgcttagcgta
aacggtgattgcgcacttagtcgacgtttggatattcagccattgccattcgaacaacga
tcgccgggtaggggtgataatcgccaggaggacgcagaagacctagtgaatcgcttgctc
acggcgatggccgcccgaaactcgactttgatggaggcgtccaccgccgacaaatacata
gcggaggtaggccgttcgctgacatcatcagcggaaaagtgtgaaaacgagatccgagag
ttttcgagggtgatcggtatgacaggcgcaaaattcgtggctaacctcatcagtgccatg
tgtaaaagccactttccggctggaaatgatgatcccgtatggatgagcccttcgaacgtg
ttaaccggtggatggcctggtcaaaaggatacgcaaggtgggggtcaaactagtggcgtt
gtcggaggtggaccccaagaagcgctagactggaacgttgacgttctgtttcgagccatt
attgccgtggaaagcgggctagactggaaggaggtggtccgccagtttgacaacccaaac
ttccttgttaaggatcgcgccgggctcaggtttttgtggcaggtgttgaccaaggcattt
gacgacgtacagagaattccaatggacattatctacggcaagtggcagaactgtgaagga
cagttcttcctccttaaacaaatgttaacgtgtccggatatcgtcaagcttaccgagtgc
ctaccatgcacgaagcccgagcccgtggtcgcgcaggagaagcctagcggcggcggcggt
actggcccaggccacgacgaggactccaacccgctttttgtcaattggaaggtcatggaa
gtgcatgacaccctgatgacgttgtgcgatcgtcccgagttgcacaatgaagttcaaaat
ctatataaagcagcaaaggaatcgtcccacgacacaatcacgatagcgttgctgcaggtc
aaatcaccaatgacccctggtcggcgcatcctactcaaggatttgatgcaacactaccta
ggtggaggagcccataatgcgcagactatcctgcacttcgcgtggagcggctcagccgca
cagccgatgcaacaggaaatgcacaagatcgttaaagaagcaatggtcgagtactacacg
tcaggagacggtgaatcgagccgattaacacgtatccttgagcttgctcaggagattaag
tgtctgcaaagtcttcttgcatcggcacgcacacttgatgccgtcggccaagtaggcatt
caaaacacgattaccttcgccattgatcttgcttgcctggcgtcccgtcgcgaatatctt
aaacttgacaagtggatggcggacaatctgagcgcgaatattgaaacgttcatgccggcc
tgtgtgtcgttcctacaacggaaggtgccctatttggtcggaaaacctggcgagacgggg
gctcaccttatcacacaagagtgtgtccatacaatgctagccacaatgttgtcacagggt
cctctaatcaaagatgaaaaacttaagatgcggctggccgaagtcttcgatcaggttcaa
aacatgatggagaatttcaatgtgatcggcggcaaacgccgtccgggaggaggtccacag
ccacctcatccaccacctccagctcatatgtctacagggcaggtaccgcctggcaatttc
caccatccacacccgcagcatcatccggtgaaccttggacagccaccgcatttgccgccc
ccgcctgcgcaaccgcagagcgatatgctgggtttccgcaatccgccaacggcaatgcag
ccgcattactcgacggggccgaacaggtcgaaccaaacacccggacaggtgtttggtcct
ggcggacctcagactcacgccgggccaatgacgctcatgggcggacctatgggtggagct
gccgctcttacggcagctgcgccgccgactactgaggaattcctacaaagtggcgacttg
acaagagtacacgtctcaaaggaaactgaagatgaggcgaactcgtactttcagaagatc
tacaaccaacctcagatcaagacagaaacgatcaaggagtttttagacatgcttaaaaga
ttcagcaattcaaacaagccaaatgaacgtgaggtgttccagtgcatgatcaggaatctt
ttcgaagagtatcgtttctttccgtcgtaccctgacaaagagttgacgatcacggctcag
ttgttcggtggcataattgactacgagctcgtgcgttatcaaaccctaacgatggcgcac
aagttcgtcgttgacgcgatcaaaaagccacagaacatgaagatgttctactttggtatc
gttgctctagactgcttcaaaacgaagataagggcaaacccctcattttgccaacttcta
cactcgtgcccaacgttcagcatgtttccggagcatttgcagttatgggtggagtgcgga
atgaaaggacaagaaccacctggcaagcctaaaggagtgatgcctctactaaacaatggc
aaactcgcgcattcgaatcctcagcagggcgttaaaaagagcactgttctggccaccggc
ggaaagccctccattgctgccgcgacgaatatcgatacgttgctgggtgcctcagacaaa
gtcgagaaaatcatcgaaccaagcgaacatacagctgacaagatcggatttatcatcaac
aacctgtcgcaggctaatgtacagcagaaatctgaggagtttagggaactggtaagcgag
gagttattcccgtggttcgcccgatacatggttgttaaacgagcttcgatcgaagctaat
ttccattcgctgtacgtcaatttccttgatacaatcaattctcagacgctatcggctctt
acgttgagtgaaacctaccgcaatattcgagttctacttcgcagtgataaggatgtatcg
gactttactgatcgcgctcttttgaagagccttggtcactggctaggtttgttgacgatc
gcccgaaaccgacctattctcacactcgacatcgatctcaaggcgctactgatcgaagcc
taccacaaaggtcttcaagatcttttatatgttgtgccatttattgctaagatccttgag
tctgcagttaagtcaaagatttttcggccacctagtccgttcacgatgggtttggtctac
gcccttgtcgaattacacagcgaacagggcctgaaactgaatctcaaatttgaagttgaa
gttctgtgcaaggctttgtgcttggacgttcagcaggtaaaagaggatgctatacgccgt
ggttgtttccacgtccttaaagatcacggtaagctcgccttgctggattcaccgcttcta
ggcccaccgccaatctcacagaatccaccgaatgtcagtgtgtccgcgccacaaatgtca
gctccgccgcaggttactagcggaccgccccacccgcatgtggctggccaacccgctccc
aaggtgaatgaaatcatcccgatgatgcagcagttcaatatgcaaaacgcgggtaccggc
ggcggcgccaatacgagtatggtgcccggcagtggcatgatgcatggccaatccggtccg
cctgaagaatttttgcaacagcaacatcagcagcaacaacagcagcagcagcagcagcag
cagcaacagcagatgggcgtaggagtacctggtgtggccccacaaaacacccaggccggt
caggctgctatcatgtcgcaaggccaacaagtttctaacaacctgactcaagcacagctg
atgcaacaacaacaacaaccgcctacgccgcagtattcacttcgggagtttaatgcggtt
acgccaaacatgcttccttcattgatctcgataccgcccaatatcccgttgtttcagacg
catcctaatctgaaattgcatgttcgtaattcagtcgaacagagcatccaggagtggatg
aaacctgtcgttgaacggtgtttaaagatcgcactcgtcacttgtgaaaatattgttaag
aaggatttcgctttggagcctgatgagaacaagatgcgcctttcgctgcacaatatggtg
cgcgccgttaccgcggccatggtcattgtcacatgcaaagagccgttgtttataacgatt
acgaacaacgctaagaagctcctgcgtgatgctttgaatatgattgcttcacagggccag
atgccgtttaactcgaaggaacaacacatcgaccaggcggcaaacgccattgctaacgaa
aatgttgaactcgcgacttgctttattcaaaagacggctatcgagaaggccgttaacgaa
gccgacaaaaagttctctgccgagtacgaggcccggaaagtcgcacgtaaagagggcaaa
gtctactgtgaccacaatgcactcagttatcaggagcgcatgccggaaattctacgattg
aagttaggtggtacaccagctccgcaaatggctgtctatgaagagtttgctcgaaacgtg
ccaggcttcgcaagctcaccgggacctggggaacgccctggagtaggacaattcgcagga
gccggtcagcatgatgcccgatcggcagaagcctatttcgcagggcagtttgctaaccaa
tctggtcaaccagcccaaaagatgccgcaagcccaggcacagccgcagccaatgatgatg
ccacctcgcgtcccgcaaatcgaggacaatgccagtggaggtggtctcgtcgaaaagatg
ttccttgaactggagatgttggtaagctatatcacgacgcacatgtcaaacactatacca
caagcgatgccggcggccagtcagcttgcgatgaatgtgcacgtcgtgcaggaagccttg
caggtgtatcgccagtcgaactacgaactttcggctggctacatggtagttcacaaaaca
atggaaagtcttctggaaggcctatttatactgaaccacccaaccttgtcgcacttggag
ggtgggcatggtcatccgcatccatctgactggtctaacaaataccgcgagacacacgtt
ctcgtcctaaaggttctggccgatcgctcgttgcttggattcaacatgaagctgccgagt
atcgttgcaaaagttctccttgagcacccaaacgaagaggccagatacaatctagcggtg
ttcgacgctctactcaggtctaacctgcttttcgtaccgctcttcgatgtacagctggca
agcttacttgatcagtctgtgtcgtttgctgctctggcgttcgcaaaagacctagtgcgc
gttgtcaatagttaccgagagagtggtgttctgccagaagcagatatgccacatacgctt
gaggcaatttaccatcatcggcgtctacctccgccacttccgccgcaaacgaacccgcag
caacagcaaccaccgcagcagcctccacagcagcaacaagcgcctttgacgcagcaccaa
caacagcagcgtcaacagcagcagcagcaacaaccgctaaaccccaaccccttaggagaa
gaatttggtggtggtggtcctgagcttatgttgggccagcgaccgttcgcagggggtccc
ggtggccagggcaatcagctcgaatataacagcccgccaatggctatgatgcattcgggg
atgagcgaggcgcggaatccagagaacgatccgcctgatcttcagaccaagaccgagtgc
ttgttacaggattgggtgtcgatgtatagttcgtcgcacggtaaggactcgacgaagaac
ttccagttgttcgttcaacagatgaacatgcagggcattcttaagacggatgacctcatc
accaagtttttccgtctttccaccgaaatgtgtgtcgagcatacgtatcgccagacgacg
aaggctgtccaacaggttaaccagcaggccgctctatctccatctcagccagctggcggt
gatggcctgagtggcagtagtgccatttcggccactcataattcaccagcactcgccgct
caccagtgcgtcaatgtcgcccggaacaagtgcttcctgacactagacgcctacgtgcgt
ctgattgccatgcttgttaagcatagcggcgaccagtccaacccaatcacgaaggtgaac
ctactgaacaaggttctaggtatcattgcaggtgtccttgtccatgatcatgagacgcga
gccagtgaattccggcaacttgcctaccaccgaatgttcttgatgctgttcctcgaactg
acagccccggaacctattttggaggtgttctcgtttcaaacattaatggccttctgcaac
accctgcatatgctccacccttctaaggtgcctggattcgctttcgcttggctggagctg
atttcccatcgtatgttcctcgccaggatgctggccattactcctcaacagaaggcctgg
ggaatgtttgcccagctacttcaagatctattcaagtttctttcaccgttccttcgtaac
atggagctaacgcctccggtgcatttgctgtacaagggcacaatccgagtgttgctcgtt
ctgttacacgacttcccggaattccttgttgattaccatcacggcctgtgtgatctgatc
ccggccaactgtgtgcagatgcgcaaccttatcctttcggctttcccgcggcatatgcgc
cttcctgatccattcacgccgctcctgcgcgttgagaccatcccggagtgtatgcatttg
ccaagaattctaccaaattatacaaccatgatccagtcattgcctctacgcaaagacctc
gatgcgttccttaaaacgcgccagccggccggcattgtagccgagttgatcgacgcgctt
ctcgtacagagcaacgctcagggaagcagtggcccgaacgaggctgggtcgcgatacaat
attccactcgtcaatgcgcttgttttgtacgtaggttcacaagcgattgccatgatgcag
ccgcagactcaacagcagccgtaccattttaccgaagctggtggccgcactccagctggc
cagaaaccgctcggtggtcctcaagctggtcaaggaaactccatcccactgacgtggcag
tgcgtcgctcggactccgcacgccgaactgtttgagcagctcatggcgaagatggataac
gaagggaggtacttggtactgaatgccattgccaatcagttgcgcttcccgaatgcgcat
acggcgtatttcagcgcgctgactctcgcactattcgcaggactacaagacatccaatca
gtgaatgctgaagaggagggtgaagccggcatcgtgtcgcgtcaaaccatgacaccagca
atggccaatgtagttcgggagcaaatcacccgcgtactgctggagaggctaatcgttaac
cgacctcatccatggggacttttggtcaccttcgtggagctgctcaagaacacacaattg
aacttctggaagtacgaattcatccgttgtgctcctgagatcgagaaactgtttgattca
gtagcgcgctcctgcgtaggtcctaagcccgtcggaagcgattaa
DBGET
integrated database retrieval system
