Vollenhovia emeryi: 105557582
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Entry
105557582 CDS
T06016
Name
(RefSeq) eukaryotic initiation factor 4A-III-like
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
vem
Vollenhovia emeryi
Pathway
vem03013
Nucleocytoplasmic transport
vem03015
mRNA surveillance pathway
vem03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vem00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105557582
09122 Translation
03013 Nucleocytoplasmic transport
105557582
03015 mRNA surveillance pathway
105557582
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vem03019
]
105557582
03041 Spliceosome [BR:
vem03041
]
105557582
03009 Ribosome biogenesis [BR:
vem03009
]
105557582
03012 Translation factors [BR:
vem03012
]
105557582
Enzymes [BR:
vem01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
105557582
Messenger RNA biogenesis [BR:
vem03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
105557582
mRNA cycle factors
Stress granule specific factors
105557582
Spliceosome [BR:
vem03041
]
Complex C
Other components
EJC/TREX
105557582
Ribosome biogenesis [BR:
vem03009
]
Eukaryotic type
90S particles
Helicases
105557582
Translation factors [BR:
vem03012
]
Eukaryotic type
Initiation factors
eIF-4
105557582
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
UTP25
AAA_22
UvrD-helicase
AAA_30
TniB
Helicase_RecD
Motif
Other DBs
NCBI-GeneID:
105557582
NCBI-ProteinID:
XP_011860248
LinkDB
All DBs
Position
Unknown
AA seq
355 aa
AA seq
DB search
MAEKSRRVAQTEDLSNVEFETSEDVEVIPTFDNMGLRDELLRGIYAYGFEKPSAIQQRSI
KPIMKGRDVIAQAQSGTGKTATFSIAILQSLDTQVRETQVLVLSPTRELATQIQKVILAL
GDFMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIKRRVLRTRAIKMLVLDES
DEMLNKGFKEQIYDVYRYLPPATQVVLVSATLPHEILEMTSKFMTDPIRILVKRDELTLE
GIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVCSMHG
DMPQKERDNIMKEFRSGQSRVLITTDVWARGIDVQQVSLVINYDLPNNRELYIHR
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atggcggagaaatcacgtcgagtggcacaaacggaggatttatcgaacgtagagttcgaa
accagcgaggatgtcgaagttattcctaccttcgataacatgggtctccgcgatgaatta
ttgcgtggaatctacgcgtacggttttgagaaaccgtcagccatccagcagcgatcaatc
aaacccatcatgaagggcagagatgtgatagcacaagcacaatctggtacgggaaaaacc
gccaccttctcgattgcaatattacagtcgctggatacgcaagtacgagaaacccaggtt
ctggttttgtccccgactcgagagctcgccactcagatccagaaagttatcctcgcgctg
ggggacttcatgaatgtacagtgtcacgcttgcattggcggtacaaatcttggagaagac
atcagaaagctcgattatggtcaacacgttgtgtctggtacacctggtagagtatttgac
atgattaagaggcgagttctcagaacgagggccatcaaaatgctggtactggacgaatcc
gacgagatgttgaacaaaggattcaaggaacagatttatgatgtgtatcgatatctacca
ccggcgacgcaggttgtcttagtctcggccaccttgccacacgaaattctcgagatgact
agtaaatttatgacggaccccattcgtatcctcgtcaaacgtgatgaattgacattggaa
gggatcaagcagttcttcgtcgctgtcgagcgagaagaatggaaatttgacacgctctgc
gacttgtacgacacgttaacgataacgcaagcagttatcttttgtaataccaaacgtaaa
gtcgactggttgacagaaaagatgcgagaggccaattttacagtgtgttccatgcacgga
gatatgccacagaaagaacgagacaacataatgaaagagtttcgatctggtcagagtcgt
gtgttaatcaccacggacgtatgggcgagaggaattgacgttcaacaggtgtcgctcgta
attaattacgatttgcctaacaatcgtgaattgtacattcataga
DBGET
integrated database retrieval system
