Vollenhovia emeryi: 105563009
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Entry
105563009 CDS
T06016
Name
(RefSeq) PH-interacting protein isoform X1
KO
K11798
bromodomain and WD repeat domain containing protein 1/3
Organism
vem
Vollenhovia emeryi
Brite
KEGG Orthology (KO) [BR:
vem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
vem04121
]
105563009
Ubiquitin system [BR:
vem04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
105563009
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_WDHD1_1st
Bromodomain
WD40_CDC20-Fz
Beta-prop_EML_2
EIF3I
WDR55
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
Beta-prop_HPS5
ANAPC4_WD40
Beta-prop_IFT140_1st
Beta-prop_TEP1_C
NBCH_WD40
Beta-prop_RIG_2nd
WDR90_beta-prop_4th
Beta-prop_DCAF12
Beta-prop_SCAP
Beta-prop_EIPR1
Beta-prop_WDR35_TULP_N
Beta-prop_IFT122_1st
Beta-prop_Nup120_160
WD40_like
Auxin_resp
Beta-prop_SPT8
Motif
Other DBs
NCBI-GeneID:
105563009
NCBI-ProteinID:
XP_011869639
LinkDB
All DBs
Position
Unknown
AA seq
1801 aa
AA seq
DB search
MEGGTSRNEFRIAPELCFLIVKFLKASICPEAATVLKRELERTEILPSRIDWEGNVHVQT
FEELEKKYPHIGPNYLLQICARIGPVLEKEVPPCVRGVISLLGAGRQSLLRTHEDLACHA
HSVVAYSGRFGGKPFLELAGSLSVPNIVRVLQGRENSGPLSRRQAIPTKFYSKMKLYRHT
LGHLSAVYCVLFDRTGKYIITGADDLLVKVWSCVDGRLLATFRGASAEIMDITVNFDNTL
LAAGSLDRVIRVWCFQSMSPVAVLTAHSGMITSINFCPIACNDVYYLVSTSTDGSVAFWS
HTKKPNERAIFQTKPIQYHEKMRPGQAQMICASFSPGGAFVAAGSADHNVRVYAMLGDEG
PRRVLEIEAHSDTVDSIQWAHSGLKFISGSKDGTANVWHFEQQQWVHKQLLMTTKLPGEL
EMEDDTTKKAKVTMVCWDVSDEFVITAVNDHTLKVWNAKSGDLIKVLRGHKDEVFVLESH
PIDPRMILSAGHDGQLIIWDVLNTEPLVCFQNFVEGQGNCAVFDAKWSPDGTRLAATDSN
GHLLMYGFGCGVEKLKIVPKELFFHTDYRPLIRDGNNYVLDEQTQTAPHLMPPPFLVDVD
GNPYPPALQRLVPGRENCRGEQLVPNIAVGAGGMQEVIEGLPEQEPRSNIDRLIEALAQR
QNINADGEAVAAGAGDDRENNVAEQPIRQIASPRGSRAGLRREGNVEGVRQSSGNWQRDN
TTPWNKPMLARPLNPAVKETQHKTILAMADAELDNWRREMRRRPQPTSSTATNQGNIGNK
LVNRKRNRTTRHGYRTRATREEQEDEYENLDNAASSASSVSSNSNDSTAHEEDMCSDSTT
DSSTEYSDWIADHGLSLEPPKRSKRKPVKKRSVTPPSETDRRRSRRPKKKQGVQIANGIR
EVPEIYRPSEWLTEAIPRKAPYYPQMGDEIVYFRQGHKFYLDAIRNKKVYELSPRCEPWT
KINIRAQEFVKVVGIKYEIRPPRLCCLKLALMDADGRLTGQNFTIKYHDMADVLDFLVLR
QTFDTALARNWSEGDKFRCMIDDGWWMGQIVGMEPLDEEFLDSLFMCLRVRWDNGEFERM
SPWDLEPVDEDRVPLELGGAVPVLPEERQAILYQPHAEEWPMGDREATCRRIIRGLDQVM
SLAIAEPFVVPVDLSLYPTYAYIVEYPIDLSTIKARFENHFYRRITSAQFDVRYLATNAE
QFNEPHSHIVKKARIVTDLCLRIIKETTDVDVPAVYHQLNDTYHSSESEMDVEDRPSTSK
PSSTRNLRSQDISQDWKLSCRHLLECLWQCEDSIPFREPVDRLEHPEYHQIIDTPMDLRT
VKEDLVGGNYDTPIEFVKDMKLIFTNSRNFNTNKRSRIYSMTIRLSAMFEEHMDRILSNW
KSSRRRNVNSRATKTRSKRTRKKKPNLSNGTGPSKSKHAPSDDDDDDEDNADSEDDDDEE
SGKEQKKNSFDICLPGPSRMTNGHTKRSNSGPSRPTLKLRICRSTVAKKPKDSDSDASES
EATSDSDSSDSAPVRRTRARTAMPSVSADSDSGDDYTPGGRGKQVRKNRGRNIKNGKQSK
PKVKSNVIADDEDDDDDEYVAENKANEDNEEDEEEFLAPDSTEEESEEEKIIKRDTRSRK
LVTVGGQNQKYAANNGKNGNSDSESEEEEEEEQEQEEAEAEAGEEEEEGDVEEPQQLQHK
ANNQDSEDSDYSYKRSFRSSRSSRRTQRDSVDLEDTRQHSSTRRSSTRKRPCYNEDSDDE
DVDVDEHEHTVTPVRNRRKIKRRSYAEDSDESMPEPGISISSRGRIRKMTPRARAYLLES
P
NT seq
5406 nt
NT seq
+upstream
nt +downstream
nt
atggagggcggcacgtccaggaacgagttcaggatcgcaccagagctgtgcttcctgatc
gtcaagttcctcaaggcgagcatctgtccggaggcggcgacggtgctgaagcgggaattg
gagcgtaccgagatactgccgtcgcggatcgactgggagggcaacgtgcacgttcagacg
ttcgaggagctggagaagaagtatccccacattgggccgaattatttgttgcaaatatgt
gccagaatagggccagtgttagagaaagaagtgccgccatgcgttcgtggagtgatatct
cttctgggagcaggcaggcagtccctgctgcgtactcacgaagatcttgcgtgtcacgcg
cacagcgttgtcgcttattctggaagattcggcggaaaacctttcttggaactggccggt
agcctgtcggtgcctaacatagtacgtgtacttcagggacgcgagaattctggccctttg
agtcggaggcaggcgataccgacaaagttctacagcaaaatgaagctgtatcggcatacg
ttgggtcacttgtccgcggtatattgtgtactgtttgatcgcaccggcaaatacattata
accggagccgatgatttgctcgtcaaggtctggagttgcgttgacgggcgtttgctcgcc
actttccgcggcgcgtctgcagagattatggacattacggtgaattttgataatactctg
ctggcagcaggcagtttggatcgagtaatacgggtctggtgttttcagtcgatgtcacct
gtggcagttttaaccgcgcattcaggcatgattacgtccatcaatttttgtccaatagcg
tgtaacgacgtttactatttagtctctacaagtactgacggatccgtagccttttggtct
catacaaagaaaccgaacgagagagcgatatttcaaacaaagcccatccagtaccatgaa
aaaatgaggcccggccaggcgcaaatgatctgtgcctccttcagccccgggggcgcattt
gtggcagccggctccgcggatcataacgtgagagtttacgcgatgttgggtgacgaagga
cctcgcagagtcctcgagattgaggcgcattccgacacagtcgatagtattcaatgggcg
cacagtggcttaaaattcatttccggttctaaagatggtactgcgaacgtgtggcatttc
gagcaacagcaatgggtgcataaacagctgctcatgacgacaaagctccctggagaacta
gagatggaggatgatacgaccaaaaaggcgaaagtgactatggtttgttgggacgtgagc
gacgaatttgttataacggcggtgaacgatcacacgctgaaagtgtggaatgcaaaatcg
ggtgacctgataaaggtcctgcgggggcacaaagacgaggttttcgtgctggagtcgcat
ccaatagatcctcgaatgattctcagtgctggccacgacgggcaacttattatttgggac
gtattgaatacagaaccgttggtgtgctttcaaaattttgtcgagggccaaggaaattgc
gctgttttcgatgcgaaatggtcgcccgatggtacgaggctcgccgcgaccgattccaac
gggcatctcttgatgtacggatttggatgtggagtcgagaaactgaaaatcgtaccgaaa
gaattattcttccacacggactaccgtcccttgataagagacggaaataactacgttctc
gacgagcagacacaaacggcgccacatttaatgccgccaccatttttggttgatgtagat
ggaaatccctatccgccggcgttgcaaagattggtgccgggtagagaaaattgtagaggc
gaacaattggtaccaaatatcgcggttggtgcaggcggcatgcaagaggttatagaaggt
cttccagaacaagaaccgagatcgaacattgatcgattgatcgaggctctagctcagagg
caaaatatcaatgcggatggagaagcggtcgctgccggtgccggcgatgacagggagaac
aacgtcgcggagcaaccgatccgtcaaatagcgagtccccgcggtagcagagccggtttg
aggagagagggcaacgttgaaggtgttcggcaaagtagcggtaactggcaaagggataac
accactccgtggaacaaacccatgctcgcgcgtcctctgaatccggctgtgaaagagact
cagcataaaacaattctagcaatggccgatgcggagttggacaactggcgtcgggagatg
cgacggcgaccacagcctacctcgagcactgccactaatcaaggcaatataggaaataaa
ctcgtaaaccgcaagcgtaatagaactactaggcacggttatagaactagggcaacgcgc
gaagaacaagaggacgaatacgagaatctcgataatgctgcgtcgtcagcgagttcagtc
agtagcaatagcaatgattccaccgctcacgaggaggatatgtgctccgatagcaccacg
gactccagcaccgagtattccgattggatcgcggatcacgggttgagtttggagccgccg
aagcgcagtaaacggaaacccgtgaaaaagcggtccgtcacgccgccgagtgagacggac
agaagacgcagcaggcgtcctaagaaaaaacagggagtacaaatagctaatggtattcgt
gaagttcctgaaatttatcgaccttcggaatggctcaccgaagcaataccgaggaaagcc
ccttattacccacagatgggcgacgaaatagtatatttccgacaaggtcataaattctat
ttagatgcaattaggaataaaaaggtttatgagcttagtccgcggtgcgagccatggacc
aagataaatattagagcgcaagaatttgtgaaagtagtgggtattaaatatgaaatacga
ccgcctcgtttgtgctgtttgaaattagcattgatggatgcggacggtcgactcactgga
cagaatttcaccatcaaataccacgatatggccgatgtgttagatttcttggtcttgcgc
caaaccttcgacacggcgttggcacgaaattggtctgagggagataaatttcgttgtatg
atcgacgatggatggtggatgggacagattgtcggaatggagccattggacgaagagttt
ctggactcgttgttcatgtgcttgcgcgttagatgggacaatggggaatttgaacgaatg
agcccttgggatctcgaacctgtcgacgaagacagagtcccgttggaacttggcggcgca
gttcccgtcttaccggaggagagacaggcgattctgtatcagccacatgcggaggagtgg
ccgatgggtgacagagaagcgacctgtcgccgaatcatacggggcctggatcaagtgatg
agcctcgcgatcgcagagccatttgtggtgccggttgatctcagtctttatccaacttac
gcctacatcgtggagtatccgatcgatttgtcgaccataaaggctcgcttcgaaaatcat
ttctacagaagaatcacgtcggcgcaattcgacgtcagatacttggcaacgaatgccgaa
cagttcaacgagccgcacagtcacatagtgaaaaaggcgagaatagtcactgacctgtgt
ctacgtataataaaggaaaccaccgatgtagatgtcccggcagtatatcatcagttgaac
gatacgtaccactcttccgaatcggagatggacgtagaggacagaccttcgacgagtaaa
ccgagttccactagaaatttacgttcgcaagacatttcgcaagactggaaactgtcgtgt
cgccacctgctcgagtgcctgtggcagtgcgaggactcgatacctttcagggaaccggtg
gacagattggagcatccggaatatcatcaaataatagacacaccgatggacttgcgcacc
gtcaaggaggatttagtgggcggtaattacgatacgccaatagaatttgtcaaggatatg
aagttgatttttacaaacagtaggaatttcaataccaacaaacgttcgaggatatactcg
atgacaataagactgtctgctatgttcgaggagcatatggataggatactttcaaattgg
aaatcgtcgcgcaggcgtaacgttaacagccgggcaacgaagacgagaagcaagaggact
cgaaagaagaaacctaatttaagtaacggcacaggaccttccaaatcaaaacatgctcct
agcgacgacgacgacgatgacgaggacaatgcggacagtgaggacgacgacgatgaggag
tcgggtaaagagcagaaaaagaacagttttgacatatgtttacctggcccgtctcgaatg
acaaacggtcacacgaaacggtctaattccggcccgtcccggccaacgttgaagctgcga
atctgccggtcgaccgtagcgaagaagccgaaggacagtgatagtgacgctagtgagtcc
gaggcaacgtcggacagtgatagcagtgacagtgcccctgtccgaagaactagagcgagg
acagcgatgcccagtgttagtgccgatagcgattccggggacgattacacgcccggcggt
cgcggcaaacaggttcgcaagaatcgcggtaggaatattaagaacggtaagcagtccaaa
cctaaagtgaaatcgaacgttatcgcggacgacgaggacgacgacgacgatgagtacgtt
gcggagaacaaggcgaacgaggacaacgaagaggacgaggaggaattcctcgcgccagac
tctacggaggaggagagcgaagaagagaagatcatcaaaagggacactagatcgcgaaag
ttagtaaccgtgggcgggcagaatcaaaagtacgccgctaacaacgggaagaacggtaac
agcgacagcgagagcgaggaagaggaagaggaagagcaggagcaggaggaggcggaggcg
gaggcgggtgaggaggaggaggaaggagatgtagaagagccgcaacagttacagcacaag
gccaataatcaagactctgaggacagtgattattcctacaaaagatccttcagatcgtcg
cgctcgagtcgccggacgcagcgcgattccgtggacttggaggacacgaggcagcacagt
agcaccaggcgatcctcgacccgcaaacggccctgctacaacgaggacagcgacgacgag
gacgtggacgtggacgaacacgaacacaccgtgacgccggtgagaaaccggcgcaagatt
aagcgtcgctcgtacgccgaggatagcgacgagagcatgccggagcccggcatcagcata
agtagccgaggtcgcatacgtaaaatgacaccgcgtgcccgcgcttatctcctagagtcg
ccctaa
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