Vollenhovia emeryi: 105567688
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Entry
105567688 CDS
T06016
Name
(RefSeq) tetratricopeptide repeat protein 37
KO
K12600
superkiller protein 3
Organism
vem
Vollenhovia emeryi
Pathway
vem03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vem00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
105567688
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vem03019
]
105567688
Messenger RNA biogenesis [BR:
vem03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
105567688
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_16
TPR_19
TPR_14
TPR_8
TPR_2
TPR_1
TPR_CcmH_CycH
TPR_17
TPR_11
ANAPC3
TPR_12
TPR_9
ARM_TT21_C
TPR_7
ChAPs
TPR_6
PknG_TPR
DUF7017
T7SS_EccA1_N
Alkyl_sulf_dimr
BTAD
TPR_20
TPR-S
TPR_21
TPR_10
DUF5588
Motif
Other DBs
NCBI-GeneID:
105567688
NCBI-ProteinID:
XP_011878141
LinkDB
All DBs
Position
Unknown
AA seq
1295 aa
AA seq
DB search
MSDDVKVLLKEAREFFKQNEYLEVMKKCKKVLKKDKSNYAALVLLARSMQEVEEFKSQVS
LVLQKAVEVQPNNPLAWQGLAAHYEKAPQDHDNWGKLALAYCKLLQLDSDSPKFTHFVDK
ISEIVLRIKNDDILAETLSTLSTLREVSTKEKINLIDKTLAWVLSEYPSDRINKHQELYE
DVLASVIKDADLVNRQEYYRRYLKMLYDSRKFTKLLAAAQGMHVQFPQDACPLEWLCRVY
YEEAASCETELEIDVTQFYESLFELNANSEAALVAKATYLKRADELIDSRDCLKQVVSLN
AQSFYAWLMLSQVYYKLYCWEETENASRKALQSMKLRLKDKFQCGVKLRLLEAISRSSSK
QKLEEARCMCEELLSIEPSVQLQVIHARINILLDEPDATAILNNLESQDETKHQAFILKA
LHLRRHKRYEEAINALELALDNAEAWLLFGKIYWDMGDYNHSLMAFLNGVQADRNNWECM
VYLGHYYREHNNDIERSRRCYHAALQINPNSEEAGIGLSTAYRLLKNTNANIQLLQRVTM
QGTGPKWAWLQLGLHYLDQGDAGQAITALQHVIRADPNDNHSWESLADAYLVRGAHTSAL
KSYQRVLQLSPGSLYPIIQLANIKLLIGQHKEAKEDFEGILQNNKQHILALKGLAQACLG
LARENVAKHFLCRARENLQQAADSLIDVITIRSDLLCNWKLLGDVCYRVVTLPEKYCYLT
IKSALMKCDSAEKYMNIKGDEILMLAIRCFCRAISIQNSATLWHDLACCYSTQLNRDSTA
NKNDIATKCYAAAKHAVKLCPQSWLNWNILGIVCMSVYVKNYALAQHCFIMAIDRESNNA
VAWSNLGTLYLQLGDIYKANEAFSRAQRADPSYVNSWVGQGLIAEKTLRKEAMDLFRHST
QLGYHSQAALGYAHWVLTSLLNPAMKKDPLFVYVIENMHAIPAASDVLTWYTEREPHDVY
ALNTHGLLLERLKLYNTAAKQFATALKLSEDEERNMISVNLARILIQIGRYEEAVALCRQ
VKCANFNSQCHLALSLFKAKQYEESYSTYEAALHWLADTSADKGNILCAMAAIAYMFQGA
DAVKTLLFQCIQIEPPTVTGFLATAALGILHDDVNLTSLVLNELKSYENHHEYGYHVVTL
SAYYQAIQGNLAQAARILVKAIFRHPNDVRYWVRLVRVLLLGENLEVFRKCAVTALTLSR
NTSMTDGVYVACASAYSHFGTKEGLRRAQKNMFTYPGNAESWANLVAALLSRDKHCTPIN
DRWVLSLISVMKSQFKTSEAMSQWLFRNERELGDL
NT seq
3888 nt
NT seq
+upstream
nt +downstream
nt
atgtcagacgacgtcaaggtcttgctaaaggaagcccgcgagttcttcaaacagaatgaa
tatctggaagttatgaaaaagtgtaagaaggtcctgaagaaggataagagcaattacgcg
gcgctggtcctgctggcccgttccatgcaagaggtggaggaattcaagtcgcaggtgtcc
ctggtcctccaaaaggccgtggaggtgcagccgaacaatccgctggcttggcagggcctg
gcggcgcactacgagaaggcgccgcaggatcacgacaactgggggaagctggcgctagcc
tattgcaagctgttgcagttggacagtgactcgcccaaattcacgcatttcgtggataag
atctccgagattgttttgcgcatcaagaacgacgacatactggccgagacgctgagtaca
ctgagcacgctgcgagaggtctccaccaaagagaagataaacttgatcgacaagaccctg
gcgtgggttttatccgagtatcccagcgacaggataaacaagcatcaggagctttacgag
gatgtgttggcgtctgtgatcaaagatgcggacctggtgaacagacaggagtactacagg
agatatttgaagatgctgtacgattcgcgtaaatttacgaaactgttggcagccgcccaa
ggcatgcacgttcaattcccacaggacgcttgtcctctagaatggttgtgccgtgtttac
tacgaagaggctgcgtcgtgcgagaccgagctcgagatcgacgtaactcagttttatgag
tcacttttcgagctgaacgcaaactccgaggctgcgctcgtcgcgaaggcgacgtatttg
aagagggcggacgagttaattgactcgcgcgattgcttgaaacaagtggtctcgctgaat
gcccagtcgttttacgcttggctgatgctgagccaagtgtattacaagctctactgttgg
gaggagaccgagaatgcttcgaggaaagcgctgcagtcgatgaaactccgtttgaaggac
aaatttcaatgtggagtcaagctcaggctgcttgaagctataagtagaagcagtagcaag
caaaagttggaggaagctcgttgcatgtgcgaagagctgctaagcatcgagccttccgta
caattgcaagtgatacacgcgcgtataaatatactgctggacgagccggacgctactgct
atattgaataacttggaatctcaggacgagactaagcatcaagcttttattctcaaagcg
ttgcacttgagaaggcacaaacggtacgaggaagctatcaacgctctcgagctggctttg
gacaatgccgaagcttggctgctgttcggtaaaatatattgggacatgggagactacaac
cacagtctgatggcgttcttaaacggcgtccaagcggatcgcaacaattgggaatgcatg
gtttacctgggacactattaccgcgagcacaacaacgacatagaacgttcgagaaggtgc
taccacgccgcgctgcaaatcaacccgaactccgaggaggccggcatcggattgagcacg
gcttatcgtctcctcaagaataccaacgccaatatacagctgttacaaagggtaaccatg
cagggtaccgggccgaagtgggcctggctccagctgggcctgcattacttggatcagggt
gacgcggggcaggccatcacggcgttgcagcacgtgatcagagccgatcctaacgacaat
cacagctgggaatctctggcggatgcgtacttggtacgtggcgctcacacgtccgcactg
aagtcgtatcagcgcgtgctacagctgagcccaggatccttgtatcccataatacaactc
gcgaatatcaaactgctcattggccagcataaagaagccaaggaagacttcgagggtata
ttgcagaacaacaaacagcatattctcgcgttaaaaggcctggcacaggcgtgtttgggt
ctggcgagggaaaacgtcgcgaagcactttctgtgtcgcgcgagggaaaatctacaacag
gcagcagacagcctgatagatgttattacaatacgtagcgatctgctttgcaattggaaa
ttgctgggcgacgtgtgctacagagtagtcactctgccggaaaagtattgctatttaacg
atcaagtccgcattaatgaagtgcgacagtgccgagaaatatatgaatatcaaaggagac
gagatactcatgttggcaataagatgtttttgtcgggcaatatccatacaaaattctgca
acgttgtggcacgatttggcgtgctgttactcgacgcagctaaatcgcgattctacagcc
aataagaacgacatagcgaccaagtgttacgcggccgcgaaacatgccgtcaaactctgc
ccgcagtcgtggctaaattggaatattctgggcatcgtttgtatgtcggtgtacgtgaaa
aattacgccctggctcaacattgtttcatcatggcgatcgacagggagtcgaacaacgcg
gtagcttggagcaatttgggaacgttatacttgcagttaggagatatctacaaagcgaac
gaagcattttctcgggcgcaacgtgcggaccctagttacgtgaatagctgggtcggacaa
ggattgatcgcggagaagactctgaggaaggaagcgatggaccttttccggcattcgacg
caactgggttatcacagtcaagcggctttaggctatgctcactgggtgcttacttctctc
ctaaatcctgcgatgaagaaagacccactgttcgtttacgtgatcgagaacatgcacgcg
atacctgcagcgtctgatgttctcacttggtacacagaacgcgagccgcacgatgtttac
gccttgaatacccatggtttgttattggaacgattgaaattgtacaacacagcggctaag
caattcgccacggccttaaaactgagcgaggacgaagaaagaaacatgatatctgtaaac
ttagcacgcatcctgattcaaatcggaagatacgaggaagcggtggcattgtgcagacaa
gtgaaatgtgccaatttcaattctcagtgccatctagcactgtccttgttcaaagccaag
cagtacgaagaatcgtacagcacgtacgaagcagctttgcactggctggcggacaccagc
gcggataaagggaacatcctgtgcgcgatggccgcgattgcctacatgttccaaggggcg
gacgccgtcaagactctgctgttccagtgtatacaaatagaaccgcctactgtaaccggt
ttcttagcgactgccgcgttggggattttgcacgacgacgtcaatctgacttccttggta
ctcaacgaattgaaatcgtacgagaaccatcacgaatacggttaccatgtcgtcacgctg
tcggcgtactatcaagctatccaaggaaatctcgctcaagctgctcgaatacttgtcaaa
gctatattcaggcatcctaacgatgtcagatactgggtgcgtctcgttcgagttttgctg
ctgggcgaaaatctggaagtcttccgtaaatgcgcggtaacggcgctgacgctaagcaga
aatacgtccatgaccgacggcgtatacgtcgcctgcgcgtcggcgtacagccacttcggc
acgaaggagggcctcagacgagctcagaaaaatatgttcacgtatcccggcaatgccgag
agctgggctaatctcgtcgcggcccttttatccagagacaagcactgcactccaattaac
gatcggtgggtactgtcgctgatatcggtgatgaaatcgcaattcaaaacctccgaagcc
atgtcacaatggttatttcgcaacgagagagaactcggcgatctctga
DBGET
integrated database retrieval system
