Verrucosispora sp. NA02020: HUT12_07890
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Entry
HUT12_07890 CDS
T06958
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
ver
Verrucosispora sp. NA02020
Pathway
ver02024
Quorum sensing
ver03060
Protein export
ver03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
ver00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
HUT12_07890 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
HUT12_07890 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HUT12_07890 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
ver02044
]
HUT12_07890 (ffh)
Enzymes [BR:
ver01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
HUT12_07890 (ffh)
Secretion system [BR:
ver02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
HUT12_07890 (ffh)
Eukaryotic Sec-SRP protein
HUT12_07890 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
AAA_22
cobW
nSTAND3
APS_kinase
Zeta_toxin
ArsA_ATPase
NTPase_1
6PF2K
AAA_33
MMR_HSR1
AAA_30
AAA_18
AAA_31
AAA_16
MobB
NPHP3_N
Thymidylate_kin
NACHT
TsaE
AAA_5
AAA_25
ATP_bind_1
AAA
ABC_tran
AAA_28
KAP_NTPase
AAA_17
Motif
Other DBs
NCBI-ProteinID:
QKW12731
LinkDB
All DBs
Position
1798829..1800373
Genome browser
AA seq
514 aa
AA seq
DB search
MFDTLSDRLSGIFTKLRGKGRLTDADIDATAREIRLAMLEADVALPVVKGFIANIKERAR
GAEVSQALNPAQQIIKIVNEELVAVLGGEGRRLQFAKQPPTVIMLAGLQGSGKTTLAGKL
ARWLRTQGHQPLLVAADLQRPNAVGQLQVLGGRAGVEVYAPEPGNGVGDPVQVAKASIEH
ARRSARDVVIVDTAGRLGIDAEMMQQAANIRDAVEPDEVIFVIDAMVGQDAVRTAEAFRD
GVGITGVVLSKLDGDARGGAALSVREVTGQPILFASTGEKLEDFDVFHPDRMASRILGMG
DVLTLIEQAEAAFDTDQKEKMTAKLMGGEQFTLEDFLDQLIAVRRMGPIANVLAMMPGMG
QVKDQLAELDDKHFDRITAIIRSMTPAERTNPKIINGSRRARIANGSGVTVMDVNQLLNR
FTDAQKMMKQMGGMMGLPGGGRRKATKSPKNKRKGTKGGNRPRTGAGMPGGFPGGMPQLP
PGMNPDDLAGGQGLPPGFKLPKIDFNKLGKRDKP
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
gtgtttgacaccttgagtgaccgcctctccgggatcttcaccaagctccggggcaaggga
cgcctcaccgacgccgacatcgacgccaccgcacgcgagatccgtctcgcgatgctggag
gccgacgtcgccctgccggtggtcaagggcttcatcgcgaacatcaaggagcgggcccgg
ggggcggaggtctcccaggcgctcaacccggcgcagcagatcatcaagatcgtcaacgag
gaactggtcgcggtcctcggtggtgaggggcgtcggctccagttcgccaagcagccgccg
acggtgatcatgctcgccggcctccagggctccggtaagaccaccctcgccggcaagctg
gcccgctggctgcggacccaggggcaccagccgctgctggtcgccgccgacctccagcgc
cccaacgccgtcgggcagctccaggtgctcggtggccgggccggtgtcgaggtgtacgcc
ccggagcccggcaacggcgtcggtgacccggtgcaggtggcgaaggcctccatcgagcac
gcccggcggtcggcgcgggacgtggtgatcgtcgacaccgccggtcggctcggtatcgac
gcggagatgatgcagcaggccgcgaacatccgggacgcggtcgagccggacgaggtcatc
ttcgtcatcgacgcgatggtcggtcaggacgcggtgcggaccgccgaggcgttccgcgac
ggcgtcggcatcaccggcgtggtgctgtccaagctcgacggcgacgcgcgcggcggtgcc
gcgctgtcggtccgcgaggtgaccgggcagccgatcctcttcgcctccaccggcgagaag
ctggaggacttcgacgtcttccaccccgaccggatggccagccggatcctcggcatgggc
gacgtcctcactctgatcgagcaggccgaggcggccttcgacaccgatcagaaggagaag
atgaccgccaagctgatgggcggtgagcagttcaccctggaggacttcctcgaccagctc
atcgcggtacgccggatggggccgatcgccaacgtgctggccatgatgccgggcatgggg
caggtcaaggaccagctcgccgagctggacgacaagcacttcgaccggatcaccgcgatc
atccgctcgatgaccccggccgagcgcaccaacccgaagatcatcaacggctcccggcgg
gcccggatcgccaacggttccggcgtcaccgtgatggacgtcaaccagctgctcaaccgc
ttcaccgacgcgcagaagatgatgaagcagatgggcggcatgatgggcctgcccggcggc
ggccgacgcaaggcgaccaagagcccgaagaacaagcgcaagggcaccaagggcggcaac
cggccgcgcaccggcgccgggatgccgggtggcttcccgggcggcatgccgcagctcccg
ccggggatgaacccggacgacctggccggcggccagggcctgccgccgggcttcaagctg
ccgaagatcgacttcaacaagctgggtaagcgggacaagccgtag
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