Vibrio antiquarius: VEA_003556
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Entry
VEA_003556 CDS
T01107
Name
(GenBank) GGDEF family protein
KO
K20959
diguanylate cyclase [EC:
2.7.7.65
]
Organism
vex
Vibrio antiquarius
Pathway
vex05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vex00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
VEA_003556
Enzymes [BR:
vex01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.65 diguanylate cyclase
VEA_003556
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GGDEF
CHASE
LapA_dom
Motif
Other DBs
NCBI-ProteinID:
ACY51716
LinkDB
All DBs
Position
1:complement(2146439..2147980)
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AA seq
513 aa
AA seq
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MTQSTAHKSVIKRHSDSILAFAATLCVTAGVVGAAYTMQQRYTQTTFDTLADRQAESLKA
NVENDLKFIGAGANFFHSIERTYWSSFPMYAEHVINSSRSLIGLQWMQKVEFEDLDEHIL
KTRQTFPDFQPFTVPKDGPKTYGYIFEHKEPIFIASDIYPRTPENLSLLGFYFSRKRFAL
ILDDISTNGRANVSDKVRLLQDGYDKSIPKTGLLVFHPVFDFENQHLLGVVTGVIRSTVY
FEDLITKTATELDMSVRVEDLGFDAADDPVLFQSSNWDNIRGTVISRTIQLPNREWRIDF
KLSDAVSAWERSILAGTTLAGLVIAFLISWIVNLQSREKERLAVMLELKTVELKRMAERD
PLTQLLNRRAFNDHLLSQINKGVSFALVGFDIDHFKVINDKHGHLGGDEALQHVTKLVSA
NLKPGDRFYRAGGDEFCIISKVIDKEALEAYLEKLRSIVASTAFDYGDTSIICTLSIGAA
VHKDEDPESLYHKMDNQLYLSKKNGRNNVSIGD
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atgacacaaagcaccgctcacaagagcgttatcaaacgacattcagactctattctagct
tttgcagcgacgttgtgtgtcactgctggtgtggtcggtgctgcttatacgatgcagcaa
cggtatacgcagacgacgtttgatactttagctgaccgacaagcagaatcactgaaagcg
aacgtcgaaaatgatttaaagtttattggtgcaggtgcaaacttttttcattcgattgaa
cgcacctattggtcttcgttcccaatgtatgcggaacacgtaatcaatagctcgcgaagt
ctaattggacttcaatggatgcaaaaggtcgaattcgaagaccttgatgagcatatttta
aagacccgtcaaacatttcctgatttccaaccgtttaccgttcctaaagatggccccaaa
acctacgggtacatttttgaacacaaagagccaatttttatcgcatcggatatttatcca
agaacaccagaaaacctttctctactgggtttctatttttcacgtaaacgcttcgctctc
atcttggatgatatatccacaaatgggcgagcgaatgtctcggataaagttcgcttactg
caagatgggtatgacaagtccattcctaaaactgggctgctagtgttccatccagtgttt
gacttcgagaaccaacatttattaggtgtagtgacaggggtgattcgaagtacggtttac
tttgaggatttgatcacgaaaaccgcgaccgagctagatatgtcggtgcgcgtagaagat
ttaggctttgacgcagcagatgaccccgttctcttccaaagttcaaactgggacaacatt
cgaggaacggttataagccgtaccattcaactgcctaatcgtgagtggcggattgatttt
aaactttctgatgccgtctctgcttgggagcgttctattttagcgggcacgacattagcc
gggttggtaatcgcctttttgattagttggattgtgaatttacagtcacgagaaaaagag
cgcttggcggtcatgttagagcttaaaaccgtcgaattaaaaaggatggctgagcgtgac
cctctaactcagttactcaatcgccgagcgtttaacgatcacttgcttagccagataaat
aaaggtgttagcttcgcattggttggttttgatatcgaccacttcaaagttatcaatgac
aagcatggtcatttagggggagatgaagcattgcagcatgtgactaagctagtcagtgcg
aatctaaaacctggagaccgattttatcgtgctggtggtgatgagttctgtattatttct
aaagtcattgataaagaagcactggaagcttatctggaaaagttgcggagtatcgtggca
agtacggcttttgactatggcgatacttcaatcatttgcacgttaagtatcggcgcggct
gtccataaagatgaagatcctgaaagcttgtatcacaaaatggataatcaactttatttg
agtaaaaaaaacggtcgtaataatgtgtcgattggcgattaa
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