KEGG   Vibrio furnissii: vfu_A00878
Entry
vfu_A00878        CDS       T01680                                 
Name
(GenBank) ssDNA exonuclease RecJ
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
vfu  Vibrio furnissii
Pathway
vfu03410  Base excision repair
vfu03430  Mismatch repair
vfu03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:vfu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    vfu_A00878
   03430 Mismatch repair
    vfu_A00878
   03440 Homologous recombination
    vfu_A00878
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:vfu03400]
    vfu_A00878
DNA repair and recombination proteins [BR:vfu03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     vfu_A00878
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     vfu_A00878
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      vfu_A00878
SSDB
Motif
Pfam: DHHA1 DHH RecJ_OB
Other DBs
NCBI-ProteinID: ADT86074
LinkDB
Position
1:896171..897910
AA seq 579 aa
MIEIQRRPEPDLAQLPDTIPPLLRRIYLNRGVSSVEQLEKAAKALHSYQQLHGIDAAVEL
LFEAIKQQKRIIVVGDFDADGATSSALSVLALRMLGSHNVDYLVPNRFEDGYGLSPEVVE
QALAMNAEMIMTVDNGVSSIEGVRFAKQHGLSVLVTDHHLPGAELPEADAMVNPNLQQCA
FPSKALAGVGVAFYLMMALCVYMRRCGWFAEQGMAEPKLMELIDLVALGTVADVVPLDEN
NRILVHQGLQRIRAGKARPGIQALIEVAKRDARKLVASDFGFALGPRINAAGRLDDMSFG
VELLLSNNIHAARRMASELDGLNQTRKEIEEGMKQEAMAFCERLQFGKDTELPHGLVMFQ
RDWHQGVIGILASRIKEQFHRPVIAFADGGDGLIKGSCRSIPGLHMRDALDKIDTQNPGI
ILKFGGHAMAAGLTIEEHNFERFSRLFDEVVRQDLDDALLKGVILTDGELAPEEFSMHVA
EMLRAGGPWGQAFPEPVFDGEFKVLHQKLVGEKHLKLMLEPLHKGHPTNIMIDGIAFNVD
LRRWPDASVKTVRLAYKLDINEFRGNQSLQLMVDHLEAR
NT seq 1740 nt   +upstreamnt  +downstreamnt
atgattgaaattcaacgacgaccggagccagatctggctcaactcccagacaccattcct
ccactgttaagacgcatctacctcaaccgtggggtgagcagtgtcgaacaactggaaaaa
gcggccaaggcgctgcactcctatcagcaactgcacggcatcgatgccgctgttgaactg
ctgtttgaggccatcaagcagcagaagcgcatcatcgttgttggtgactttgacgccgat
ggtgccaccagttccgccttgtcggtactggcgctgcgcatgctgggtagccacaacgtg
gattatctggtgcccaaccgttttgaagacggttatggcctgagccccgaagtggtagaa
caagcgctggcgatgaacgccgagatgatcatgaccgttgataacggcgtgtcctcgatt
gaaggcgtgcgatttgccaaacaacacggactgagcgtgttggtgaccgaccaccactta
ccgggcgctgagctgccggaagcggacgccatggtcaaccccaacttgcagcaatgcgcg
tttccttccaaagcgctggctggcgtgggggtggcgttttacctgatgatggcgctgtgc
gtttacatgcgtcgttgcggctggtttgctgagcaaggcatggccgaacctaaactgatg
gaactgattgatttggtggcgttagggacggtcgctgacgtggtgccgctggatgaaaat
aaccgcattttggtacaccaaggcttacagcgcattcgtgccgggaaagcgcgtccgggg
attcaagcgctgattgaagtggctaagcgcgatgcgcgtaaactggtggcgtcggatttc
gggtttgcattggggccgcggattaacgccgcagggcgtctcgatgacatgtcctttggg
gtggagttgctgctgagcaacaacattcacgcggcgcggcgcatggccagtgaactggat
ggcctcaatcagacgcgcaaagagattgaagagggcatgaaacaagaagcgatggcgttt
tgtgaacggctgcaatttggcaaagacaccgagttgccacacggcttggtgatgttccaa
cgcgattggcatcagggcgtgattggcattttggcctcgcgtatcaaagagcagtttcat
cgtccggtgattgcgtttgccgatggcggtgacggcttgattaaaggctcttgtcgctcc
attccaggcctgcacatgcgagacgcactcgacaaaatcgacacacagaatccgggcatc
attctgaagtttggtggccacgccatggcggcgggattaacgattgaagagcacaatttt
gagcgttttagccgcctgtttgacgaggtggtgcgtcaggatctcgatgacgcgctgctc
aaaggcgtgattctgactgatggcgaattggcgccggaagagttttcgatgcacgtggct
gaaatgctgcgcgcaggcggcccgtggggacaagcgtttccagagccggtgtttgatggt
gagtttaaagtcctgcatcaaaagctggtgggggagaagcatctcaagttgatgttggag
ccgctgcataaaggtcacccgaccaacatcatgatcgacggtatcgcgtttaacgtggat
ttgcgtcgctggcctgatgcttcagtgaaaaccgtccgcctcgcttacaaactcgatatc
aacgagtttcgcggcaaccaatctttgcagttgatggtcgatcatctcgaagcacgataa

DBGET integrated database retrieval system