Viruses: 33194291 Help Entry 33194291          CDS       T40000                                  Symbol CFB61_gp1 Name (RefSeq) Karumba virus; polyprotein   KO K24570   Flavivirus structral polyprotein Virus 1969397  Karumba virus Taxonomy SSDB OrthologParalogGFITVOGVOG cluster Motif Pfam:  Flavi_NS5 Flavi_NS5_thumb Flavi_DEAD Flavi_NS1 FtsJ Peptidase_S7 Flavi_glycoprot DEAD Flav_NS3-hel_C Helicase_C ResIII RdRP_1 Cas3-like_C_2 Peptidase_S29 DUF8005 Motif Other DBs NCBI-GeneID:  33194291 NCBI-ProteinID:  YP_009388577 RS:  NC_035118 LinkDB All DBs Position NC_035118:116..10144 AA seq 3342 aa AA seqDB search MQVKKIKMRGGGGGKLGIKGIKTSSLRRALNMVSGDLNETLLKLVIAMIAIWNELLRNLR SLGRRVRKETRQRTGNNKHVVACFIIGLMAALACAKTMNGIMDKGEHVWKADWNVDFTNV KLPKDFCGSGIHVEKMCPQVDSLQDATIDCAGRHDQFLLSYTRCAAKNRVKRGEPGVVEP KVTNIWTITFNDELNSIIERVSGMLKNNRLMATAVICLVGAFKKWPTWLVVLLVLLPWTV VQASLADPFLILPKGDGLVKTRLYPGQISSISTHVGVLDISYMAVDIEEGRLVERLMSHC EVNGTYSQDCCALGCNLDLSKLNERNRACQTATYNRGWATGCPVFGLGSVATCVEVACSD SVEVSELTSQNIRIPLSLRLQHEELNVTMTTEAPVTSKFSHHGVVSISCQIGNPGFLAQQ YVLSNGKHKAMFPISAVSGWPGIREIGGQYRNVDGSVKWGHVEANEIKVAAVYSDSIQWK TGIPIKTGIRDPLYLYCEVSLTDLTFKKIRACESPVEVSFMAGPTGLDGRLEIGLLEQVN KTCSITGSCEGCTLPHPTSVISTSDKKGHMHVECRTGTFTAIFGKQKFSFTCRTSYLRTI WATTAQAIGNYRKFGLDASGGPFLDLWNKIGPNFSRLEVVGILVVAALLIDKRLLLLLAI FGYVTYVRADVGCGIDLSRKTFSCGEGIFLWNDLSSQTWAYGVEVVETKLLEAYISQMLK ERTKVCLLCEDILQCSAARRLAAVVAKSNPDVYYNDSLSYGAVFPMRKKSQITITADGRS AVVASFVIEGMITNSALGKLQWNVWNPRPTAEAMDDKVIRVLTTGSNITSVCSKAIGFEY VFERFTRKMYGSSVLVKSTSHISHTCPTYLAGAAIKNNRTIHTDGFLWMDSALQANGTYR LSSLSVLQSHECEWPVTHTINPTDPKDRSLFMPARFGAPASRANHMPGYLTQRTIPWDKA PIKLIYGVAPGTTIKEFPTCDDRGDALPILSQETREWCCKTCLSKGTPPFHLVVDGSLYY PEEVRPIPIPTKITESVAQPVTPPPVMKTMGAEATQDFQMGPGEGTFARLALLALALHLI SQNTRHGWITRVACAAMLFSVTGLPYHLRYWWPVIGFSVLKNASGQSLLVSLWLALHTTG GHLVCLGSLLRQTRWCYRLQSLMMLVASLSLYRFRGITWLMNIIDLVAPLISISFLYKAR TLLLGEVVLIGSGLALSWGNALLTLGVLFGTHMVIASLRKTANAFEPGLRANISLCNFPQ QVVRDMWTVLKNWRRAPAPWRSSGRTHISQLAVYLLLLGLAYAFHLLNLEVLAGACVLIG FLWILMGEMLTSGELELRRVSALEIPQGLEKIVIDRDFQSEYGRFTDAGVKLDNFNDETN VKFSLLSLGFVAALITVNPVCGLTIGFLIWIFTSCPLAKDLAMAASCFRSDDGFAVLIPG VKEVAIGTRFFTLSDGVYSVCRRSWNGLSHVGAGVAKNNVFHTLYHVTRGEAISWASEKV GPTSGCALRDVVTYGGDWQFPLVTEDEAVVKIVNSDLTVSHCYTNVLSLNVQGEEYGVIG HDFMEGSSGSPVFSSQGEIMGLYGYGFYDRENRYNSLISYMKMEKEEEKVKTTEEQPTMR GTRTFINWHPGKGKTRKVILEEAVRHVNENKRLLILTPTRVVMTEVLQALTGNLPFGVRV GKHLSKSRSFQITVACHATLTSHVLQHGLKINFSTVIMDECHFLDPLSIAARGIMEHMHS KGAALMYLSATPPGKAPQAGSNYPIIDVPSMPRDVDRNFVTSQAGDKTIVFVPTIAQAQK LSDQIPGSVVLSRETFDVNMSKAANPETKVVISTEISEMGANLGVDTVIDTRLCVRPVVD GRFKVRLVKVPITHASAVQRRGRTGRRQPGRYIFDDKVEPSDECSHWVCWREAQMLLDQL DMTPMPEEAENFDPPGHYKLLSDQLKQFMELLTTEMPIWLAWNWANASSSRHTVIFGGSE VTDKTTPVITTPSGKQLYNPQFVDDRFEADDLTKFHATIQKYLRMRAHINWEGLAQGLWH VVTKSDSSMFKVAFQNTMERLHDLSRWDDDSLRTSDMTESVGTWIIVMLTAVSTFIISLL IFACCRCCKSSKTTRSQEVVYTTTVAERNVSGLWSSMTVPVLGWVAGIPGPILFVVAVCL GLVCAFMCNSATRSYVDHTLSWWVMVLSCIVAGLVAFELDLMPRTFAILSRVAATGARFD TGPSVEPFIVTGRHVTVELWVVIMAMYLTALIIAPILKSYIQGKSIAAVFANEPVASAYI GGMRLTTIYALQATICVGLFYFHANLPSCVVASVASFLFLMVFAFDVKYAFSPAVVRALE AKNNKRDTDRPSLERDEETKGRQLYYTLSVVMVALWVTIVRDQLTFVTAAGVGLHALMCL IVPDHPFHRNINQGIVTMLFGFLVEPVKWTFIVGFFLWGVMHYTSPNSYRSSNKGDAMNV GMKWKRLLNSLNQKQFDAYKSRSVDETPRGDYVSRGGLKMREIMEVHGWEPNGKVVDLGC GRGGWSQHLAMDRRVTEIKGYTLGGSNRENPEVFMTYGYNLCTLKPMVDVYKLEPFVTNT VICDIGESDPSAVVEKTRTLKVLTLLENWLTVSKEANFVCKVLSPYHTEVLKKLETLQHV YGGRLVRLRLSRNSTAEMYYISGPRSNMVKAVYATLRALTGRLSLYDTPFESLPPTLPTG TRADPKAKAKAADFSLLARRIQKLQQENQHTWFHDKENPYTSFSYHGSFVTDAVSGGGQT VNPIIRRLMWPWEQVAKVTGFMMTDVSTYAQQKVLREKVDTYVEEPDHRMKQINRQLALF IADLYKKQGLRPRILSKQDFVANVRSDAAVGGWASDMPWADVEGAITDPVFWDMVDRERQ LHLGGDCELCVYNTMGKKEKKPAVLGKAKGSRTIWYMWLGSRFLEYEALGFLNQDHWVSR DHLPCGVGGVGVNYFGNYLKEIAEKGKWLIADDVAGWDTRITESDIEDERSLLLSLVKDP YHKALMDSIFTMAYRNIVALFPRNHKKFGSGTVMDVVSRTDQRGSGQVVTYALNTITNAK VQLGRSLEAAGLLEADDRTIQVWLRNHGEETLRGMTVAGDDVVVATNSDSFHTSLHYLNR NSKIRKDIGPLEPSRRCDNWEEVEFCSHHFHPITLQDGRVLIVPCREQNEIIGRSRLQKG GIVSESEGACLAKAHGQMWALYFFHRRDMRLAYAAITACVPSHWFPKGRTSWSVHQKHEW MTTVDMLEVWNNVWIHDNPWMTNKEPVSSWSMVPYLPKKQDIACGSRIGTTDRTLWAKEM PELVSKLRRVLDKHEGPQQYTDGLAILGRYQQSPGNTADIYV NT seq 10029 nt NT seq  +upstreamnt  +downstreamnt atgcaggtcaagaaaataaagatgcgtggtggaggaggtggaaagctcggcattaaaggg ataaaaacatcttccctgcgtcgggcactcaatatggtctctggagatttgaatgagacc ttgctgaaactggtcatcgctatgatcgccatttggaatgagttactacgtaacttgcga tcattggggcgtagggttcgcaaggagactcgacaaagaactggaaacaacaagcatgtt gtagcatgctttatcatcggactaatggcggccttggcttgcgccaagaccatgaatgga ataatggacaagggtgagcacgtttggaaagctgactggaatgttgactttaccaatgtg aagctccccaaggacttctgcggatctggaatacacgtggagaagatgtgtcctcaggtt gattctttgcaagatgcaacaatcgactgcgcaggaagacatgaccaatttctcctgtcc tatacacgatgtgcggctaagaatcgtgtcaaacgtggtgaacccggagtagtggaaccg aaagtcacgaacatatggaccataacgttcaatgatgagttgaacagcatcattgaacgt gtgagcgggatgctgaagaacaatcgattgatggcaacagcagtcatttgcttagttggg gctttcaagaaatggcctacatggctcgtcgtgcttttggttttactgccttggactgtc gtgcaggcatcactggccgatcctttcttaattctgccgaagggtgatggtttggtaaaa actagattatacccaggacagatttcatcaatttccacacacgttggggtactggacatc tcttatatggctgtggacattgaggaggggcgactcgttgaaaggttgatgtcacattgc gaagtaaatggaacttactcacaggattgttgcgctttgggatgcaacttggacttatct aagttaaatgagcggaacagggcctgtcaaacggctacctacaatcgcgggtgggctacg ggatgtccagtttttggactgggcagtgtggccacatgcgttgaggtcgcgtgcagcgat agtgtggaggtgtccgaactgacaagccagaacatccggattcctctatctctacgtttg cagcatgaagagctgaatgtgaccatgacaacagaggcgccagttacttcaaagttctca catcacggggtggtatccatctcttgtcaaattggcaatcctgggttcttggcacagcag tacgtgctgagcaatgggaagcataaagcaatgtttcccatcagtgcggtatcaggttgg cctggaatccgtgagattggtggacagtacaggaacgtggatggctccgtcaagtggggg cacgttgaagcgaatgagattaaggtggccgctgtatatagtgacagcatccaatggaag actggaatcccgataaagacaggtattagagacccactgtatttgtactgtgaagtgtcg ctaactgacttgactttcaagaaaataagagcatgtgaatcgcctgttgaagtttcgttc atggcaggacctacgggtttggatggtcgactagaaattgggttgcttgagcaagtcaac aaaacatgctcaataacagggagctgtgaaggttgtaccttaccgcacccaaccagtgtc atttcgacttctgacaagaaaggccacatgcacgtagaatgtcgcacggggacatttacg gcaatattcggaaagcaaaaattttctttcacctgtcggactagttacctcagaactatt tgggctacgactgcccaggcgattggaaattataggaaattcggactggatgcctcagga ggaccatttttggacttatggaataagataggtccaaatttctcccgtttggaggttgtt ggaatccttgttgtggcagccttgttaattgacaaaagactcttacttctcctggctatt tttggatacgtcacatacgtgcgagctgatgtgggttgtggtattgacctatccagaaaa actttttcatgtggtgagggcatattcttgtggaacgacctttcatcgcagacttgggct tatggagttgaggtcgtagaaaccaaactgctggaagcctacattagtcagatgctgaaa gagaggacgaaagtctgcctactgtgtgaggacatcttgcaatgttcagcagcccgacgc ttagcagcggttgtggctaaaagcaatccagatgtctattacaatgattcattgtcatac ggagctgtttttcccatgcgaaagaaaagccaaataacgataacagctgacggccggtcg gctgtggttgcctccttcgtaatagaaggaatgataaccaactcagctcttggcaaatta caatggaacgtgtggaatcctcggccaacagcggaggctatggacgacaaagtgatccga gttttaacaacagggtctaacataacgtctgtatgcagtaaagccattggttttgagtac gttttcgaacggtttactaggaagatgtatggctcaagcgtcctagtgaaaagcacttca cacatttcccacacttgccctacttatttggctggtgctgccatcaaaaacaacagaaca attcatacggatgggttcttgtggatggatagtgcactgcaggcaaatggtacataccga ctcagttcactatcagtgctccagagtcatgagtgtgagtggccggtgacccataccatc aacccaacggacccaaaggatcgctctttgttcatgccagcgaggtttggagctcctgct tcacgagctaatcatatgccaggatatcttacacagcgtaccattccatgggataaggca cccataaagctgatttatggagtagcacctggaactacaattaaagaatttccaacgtgt gacgatcgcggcgatgctctgcccatcctttcacaagaaactcgtgagtggtgttgcaaa acttgtttaagcaaagggactccgccgtttcacctagtcgtagatgggtctttgtactac ccagaagaggtcagaccgatacccataccaacgaagatcacggaatctgtagctcaaccc gtaacgcctccacctgtcatgaaaacgatgggggcagaagcgactcaggattttcagatg gggccaggggaagggacatttgctcgcctggccctcctggcattggccttacatctaata tcacaaaatacgcgtcatggatggatcacccgggtcgcgtgtgcagccatgcttttctcc gtgactggccttccctatcacctccggtattggtggccggttattggtttctcggtttta aagaatgcgtcgggacagtctttgctagtgtcgctgtggttggcgttacacactactggt gggcacctcgtttgtttaggttcactcctgcggcaaacaagatggtgctaccggctccaa tccctaatgatgctggtggcgtccctatctctgtaccggttccgggggataacttggctc atgaacatcatagacctagtggctccgttgatatcaatatcttttctctacaaagcaaga accctacttctaggggaagttgtcttaattgggagcgggttagctctttcatggggaaac gccctcctaactctaggagtattatttgggacccacatggtgattgcctcgctgagaaaa acagcaaacgcattcgagccaggactacgtgccaacatctcattgtgcaacttcccacaa caggttgtgagggacatgtggactgtattaaagaactggcgcagagcacccgcaccttgg cggagctctgggagaacacatatctcacagctagcggtttatctcctgctgttgggcctc gcttatgcgttccaccttttgaacttggaagttctagccggagcctgcgtcttaatcgga ttcctctggattttgatgggagaaatgctgacctcgggagaactagaactgcggagggtg tcggctctggagattcctcagggccttgaaaaaatcgtcatagatcgagacttccaaagc gaatatgggcggttcacagacgcgggtgtcaaattggacaacttcaatgacgaaacgaat gtcaagttcagcttactttccctaggatttgtggcggctctcatcactgtaaacccagtg tgtggattgacaatcggattcctaatatggatcttcacatcatgccctctcgcaaaagac ttggccatggcagcaagctgcttccgctcggatgatggttttgctgtattaataccaggg gtgaaggaggtggctattgggacaagattcttcacgttatccgatggcgtttactccgtt tgcagacgatcatggaatggactcagtcacgtaggagctggtgtggcgaaaaacaatgtc ttccacactctttaccatgtgacaagaggtgaggcgatttcatgggctagtgaaaaagta ggacctacgagtgggtgtgctttgagagacgttgtaacatatggtggagattggcagttc ccgctggtcacggaagatgaagcggtcgtgaagattgtcaattccgacctaactgtctct cattgctacaccaatgtcctcagtctcaatgttcaaggtgaagagtacggagtgataggg cacgatttcatggaaggttcttcaggttcaccggttttttcttcgcagggggaaataatg ggattgtatggctatggattctatgaccgtgagaaccggtacaactctctgatttcatac atgaagatggaaaaagaagaggagaaagtgaagacgacggaagagcaaccaacaatgagg gggactaggacgttcatcaactggcatccagggaaagggaagacccgtaaggtgattctc gaagaagctgtcagacatgtgaacgaaaacaaacgcctactcattttgacacccaccaga gtagtgatgacggaagttctacaagctttgactggaaatttgcccttcggagttcgtgtt gggaagcacttgagtaaaagcagatcatttcagattactgtcgcttgtcatgccacccta acaagtcatgtgcttcaacatggattgaagattaacttctctactgtcatcatggatgag tgccactttctggaccccctgtcaatagctgcacgcggtatcatggagcatatgcattcg aagggggctgctctcatgtatctcagtgctactccgcccgggaaagctccacaagctggt tcaaattaccctattatagacgtaccatctatgcctagggatgttgataggaattttgtg acatcccaagctggggacaaaaccatagtctttgttccaacgattgctcaagcacagaaa ctgtccgatcaaattccaggctcagttgttttatcacgcgaaactttcgatgtaaacatg tcaaaagcggctaacccggaaacaaaagtggttatctcaacagagatcagcgaaatgggg gccaatctcggggtagatactgtcattgacactcgactgtgcgttagaccagttgttgat ggacgtttcaaagttcggttggtgaaagtcccaataactcatgcatctgctgtgcaaagg cgtggtcgaactggacggaggcagccagggcggtacatctttgacgacaaggttgaaccg tctgacgagtgctcacattgggtatgttggagggaggctcagatgctcctggatcagctt gatatgacaccgatgccggaggaagcggagaattttgacccaccaggccactataaactc ctttcggaccagcttaaacagttcatggagctgctcacgacggagatgcctatttggcta gcgtggaattgggccaacgcgagttcctctcgacacacggtgatttttggaggatctgaa gtcactgacaagacgacccctgttatcactacaccatcagggaaacaactatataatcca caatttgtcgacgaccgctttgaggcagatgatctaactaagtttcacgccacgatccaa aaatatctgaggatgcgagctcacattaactgggagggattagcccagggcttgtggcac gtcgtgacaaagagcgactcatccatgtttaaggtcgcgtttcagaacacaatggagcgg ttacatgacctatcgcgctgggatgacgactccctccggacaagtgatatgaccgaatca gttggcacgtggattatcgtcatgcttacagctgtgtcgacattcatcatctcactctta atttttgcttgctgtcggtgttgcaaatcgtccaagactactaggtcccaggaagttgtt tacactacaacagtcgcggaacgcaatgtcagtgggctttggagtagcatgacagttcca gtgttggggtgggttgctggaattccaggacctattctcttcgttgtggcagtgtgttta ggtcttgtttgcgccttcatgtgcaacagcgcgacgcgaagctacgtggaccacacccta tcgtggtgggttatggttctatcatgcattgtggcaggcctagtcgccttcgaactcgac ttgatgcctcgtactttcgctatcctttcaagagtggctgctaccggggctagatttgac actggaccaagcgtggaacccttcatcgttactgggagacatgtaactgttgaactctgg gtagtcatcatggcgatgtatttgacagccttgatcattgcccccatcttgaagtcatac atccaggggaagtcgatagctgctgtcttcgcgaatgaaccagttgcctccgcgtacata ggaggaatgaggctgacaaccatctacgcgttgcaagcaacgatttgtgtaggtcttttc tacttccacgcaaatctcccatcttgtgttgttgccagtgttgcttcgttcttgtttcta atggtatttgcttttgacgtaaagtatgccttctccccggctgtcgtccgagctttggaa gccaagaataacaaacgcgacacggatcgaccatccctagaaagagacgaagaaacgaag ggacgccaactgtactacacactatctgttgtcatggttgcactatgggtgaccatagta cgagaccaattaaccttcgtcacagctgccggtgtagggttgcatgccttgatgtgttta atcgttccagatcatccattccatcggaatatcaaccaggggattgtgacaatgttgttc gggttcttagtggaacctgtaaagtggacattcattgtcgggttcttcctctggggagtg atgcactacacaagcccaaactcgtaccggtcatcaaacaagggggacgccatgaacgtg ggaatgaagtggaagaggctgctcaattccttgaatcagaaacagtttgacgcgtacaaa tctcgctcggttgatgagactccaagaggtgactatgtgtcaagaggaggcctcaagatg cgtgagataatggaggtgcacggttgggaaccaaatggaaaagtggttgatcttggatgc ggacggggaggatggagccagcatttggcgatggatcgtcgggtcacggagatcaaaggt tacacccttggcggcagcaatcgggaaaaccccgaggtgttcatgacctatggctacaac ttgtgcacgctaaaacccatggttgatgtatataagttggagccatttgtcacgaacact gtcatttgtgacataggcgagagtgatccgtcggccgtggtggaaaaaacacgcacgctc aaggtcctcaccctgttggagaattggttgacagtctcaaaagaagccaatttcgtttgc aaggttctttcaccgtatcacactgaagtgctgaaaaaactggaaactcttcagcatgtg tatgggggacgccttgtcagactgcgcttgagtaggaattctactgcggagatgtattac atatccgggccacgatcgaacatggtgaaggcggtgtatgctacactgagagctctaacg ggccgattgtcattgtatgacacgccttttgaaagcctgccccctacattgccgacaggg acacgtgccgatccgaaggccaaagccaaagctgctgatttttcattattggccaggcgc atccagaaacttcagcaggaaaatcaacacacttggttccatgataaagagaatccttac acatctttctcctatcatggttcttttgtcactgacgctgtgtctggtggtggacaaaca gtcaatcccatcattagaaggttgatgtggccttgggagcaagtggccaaagttactggc tttatgatgactgacgtgtccacttatgcccagcaaaaagtccttcgagagaaggtggac acatatgttgaagaaccagaccaccgtatgaagcagatcaacagacaactagctctattc atcgcggacttgtacaagaagcaaggattgagaccacgcatcctgtcaaaacaagatttt gtggctaacgtacgctcagatgcagctgttggtggatgggctagtgacatgccatgggca gacgttgaaggggccataacggatccagttttctgggatatggtggaccgtgaacgtcag ctacatctcggtggtgattgtgaactatgtgtctacaacaccatgggcaagaaagagaag aaaccggctgtgttgggcaaagccaagggatcacgcacgatatggtatatgtggctcggg agtcgttttcttgagtatgaagctctgggatttctgaaccaagaccattgggtctcgaga gaccacttaccatgtggcgttggtggtgtaggtgtgaattactttggcaactacttaaag gagatcgcagagaaaggcaaatggttaattgccgatgatgtggcgggatgggatacccgg ataacagaatcagacattgaggacgaacgttctctgttgttgtccctggttaaagatccg tatcacaaagctctgatggactccatattcaccatggcttatcggaacattgtagccctc ttccccaggaatcataagaaatttggaagtggcacggtgatggacgtagtttcgagaaca gatcagcgtggatcaggacaagttgtgacttatgccctaaacaccatcacgaatgcgaaa gttcagctgggacgctcgcttgaagctgcagggttgctggaagccgatgataggactata caagtttggcttcgcaatcatggagaggaaactttaagaggaatgaccgtcgctggtgat gatgtggtggttgctaccaattcggactccttccacacttcgcttcattacctgaaccga aatagcaaaattcgcaaggacattggaccattggagccatcacgccggtgtgacaactgg gaggaagttgaattctgttctcaccattttcatccaatcacgttacaagatgggcgagtt ctaatagtgccatgtcgtgagcagaatgaaatcatcgggcgttctaggctccaaaagggc ggcattgtcagtgagagtgagggagcttgcttggcgaaggctcacggacagatgtgggca ctgtatttcttccatagacgtgacatgcgtttagcttacgccgccatcacagcgtgtgtg ccgtcgcattggttcccgaaagggaggacttcttggtcagtgcaccaaaaacatgaatgg atgacaactgttgacatgcttgaggtgtggaacaatgtctggatacacgacaacccttgg atgacgaacaaagaaccagtctcgtcatggagcatggtaccatatctccctaagaaacag gacattgcatgtggcagtcggattggaactactgaccgcacactatgggcgaaggaaatg ccggagcttgtctccaaattacgacgtgtcttggacaaacacgaaggaccacaacaatat actgatggtttggctattttgggccgataccaacagtcccccggaaacacggctgacatc tacgtgtaa

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