Viruses: 956589
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Entry
956589 CDS
T40000
Symbol
LCMVsLgp1
Name
(RefSeq) Mammarenavirus choriomeningitidis; L protein
KO
K25303
Mammarenavirus RNA-directed RNA polymerase L [EC:
2.7.7.48
3.1.-.-]
Virus
3052303
Mammarenavirus choriomeningitidis
Taxonomy
SSDB
Ortholog
Paralog
GFIT
VOG
VOG cluster
Motif
Pfam:
Arena_RNA_pol
ArenaCapSnatch
Motif
Other DBs
NCBI-GeneID:
956589
NCBI-ProteinID:
NP_694845
RS:
NC_004291
UniProt:
P14240
Structure
PDB
PDBj
LinkDB
All DBs
Position
NC_004291:33..6665
AA seq
2210 aa
AA seq
DB search
MDEIISELRELCLNYIEQDERLSRQKLNFLGQREPRMVLIEGLKLLSRCIEIDSADKSGC
THNHDDKSVETILVESGIVCPGLPLIIPDGYKLIDNSLILLECFVRSSPASFEKKFIEDT
NKLACIREDLAVAGVTLVPIVDGRCDYDNSFMPEWANFKFRDLLFKLLEYSNQNEKVFEE
SEYFRLCESLKTTIDKRSGMDSMKILKDARSTHNDEIMRMCHEGINPNMSCDDVVFGINS
LFSRFRRDLESGKLKRNFQKVNPEGLIKEFSELYENLADSDDILTLSREAVESCPLMRFI
TAETHGHERGSETSTEYERLLSMLNKVKSLKLLNTRRRQLLNLDVLCLSSLIKQSKFKGL
KNDKHWVGCCYSSVNDRLVSFHSTKEEFIRLLRNRKKSKVFRKVSFEELFRASISEFIAK
IQKCLLVVGLSFEHYGLSEHLEQECHIPFTEFENFMKIGAHPIMYYTKFEDYNFQPSTEQ
LKNIQSLRRLSSVCLALTNSMKTSSVARLRQNQIGSVRYQVVECKEVFCQVIKLDSEEYH
LLYQKTGESSRCYSIQGPDGHLISFYADPKRFFLPIFSDEVLYNMIDIMISWIRSCPDLK
DCLTDIEVALRTLLLLMLTNPTKRNQKQVQSVRYLVMAIVSDFSSTSLMDKLREDLITPA
EKVVYKLLRFLIKTIFGTGEKVLLSAKFKFMLNVSYLCHLITKETPDRLTDQIKCFEKFF
EPKSQFGFFVNPKEAITPEEECVFYEQMKRFTSKEIDCQHTTPGVNLEAFSLMVSSFNNG
TLIFKGEKKLNSLDPMTNSGCATALDLASNKSVVVNKHLNGERLLEYDFNKLLVSAVSQI
TESFVRKQKYKLSHSDYEYKVSKLVSRLVIGSKGEETGRSEDNLAEICFDGEEETSFFKS
LEEKVNTTIARYRRGRRANDKGDGEKLTNTKGLHHLQLILTGKMAHLRKVILSEISFHLV
EDFDPSCLTNDDMKFICEAVEGSTELSPLYFTSVIKDQCGLDEMAKNLCRKFFSENDWFS
CMKMILLQMNANAYSGKYRHMQRQGLNFKFDWDKLEEDVRISERESNSESLSKALSLTKC
MSAALKNLCFYSEESPTSYTSVGPDSGRLKFALSYKEQVGGNRELYIGDLRTKMFTRLIE
DYFESFSSFFSGSCLNNDKEFENAILSMTINVREGFLNYSMDHSKWGPMMCPFLFLMFLQ
NLKLGDDQYVRSGKDHVSTLLTWHMHKLVEVPFPVVNAMMKSYVKSKLKLLRGSETTVTE
RIFRQYFEMGIVPSHISSLIDMGQGILHNASDFYGLLSERFINYCIGVIFGERPEAYTSS
DDQITLFDRRLSDLVVSDPEEVLVLLEFQSHLSGLLNKFISPKSVAGRFAAEFKSRFYVW
GEEVPLLTKFVSAALHNVKCKEPHQLCETIDTIADQAIANGVPVSLVNSIQRRTLDLLKY
ANFPLDPFLLNTNTDVKDWLDGSRGYRIQRLIEELCPNETKVVRKLVRKLHHKLKNGEFN
EEFFLDLFNRDKTEAILQLGDLLGLEEDLNQLADVNWLNLNEMFPLRMVLRQKVVYPSVM
TFQEERIPSLIKTLQNKLCSKFTRGAQKLLSEAINKSAFQSCISSGFIGLCKTLGSRCVR
NKNRENLYIKKLLEDLTTDDHVTRVCNRDGITLYICDKQSHPEAHRDHICLLRPLLWDYI
CISLSNSFELGVWVLAEPTKGKNNSENLTLKHLNPCDYVARKPESSRLLEDKVNLNQVIQ
SVRRLYPKIFEDQLLPFMSDMSSKNMRWSPRIKFLDLCVLIDINSESLSLISHVVKWKRD
EHYTVLFSDLANSHQRSDSSLVDEFVVSTRDVCKNFLKQVYFESFVREFVATTRTLGNFS
WFPHKEMMPSEDGAEALGPFQSFVSKVVNKNVERPMFRNDLQFGFGWFSYRMGDVVCNAA
MLIRQGLTNPKAFKSLKDLWDYMLNYTKGVLEFSISVDFTHNQNNTDCLRKFSLIFLVRC
QLQNPGVAELLSCSHLFKGEIDRRMLDECLHLLRTDSVFKVNDGVFDIRSEEFEDYMEDP
LILGDSLELELLGSKRILDGIRSIDFERVGPEWEPVPLTVKMGALFEGRNLVQNIIVKLE
TKDMKVFLAGLEGYEKISDVLGNLFLHRFRTGEHLLGSEISVILQELCIDRSILLIPLSL
LPDWFAFKDCRLCFSKSRSTLMYEIVGGRFRLKGRSCDDWLGGSVAEDID
NT seq
6633 nt
NT seq
+upstream
nt +downstream
nt
atggatgaaatcatctcagaattgagagagttatgtttaaactatatagaacaggatgag
aggttgtcaaggcagaaactcaactttctgggacaaagggaacccagaatggttctgatt
gagggactcaagttgctgtcacgctgcattgaaatagacagtgcagacaagagtggctgc
acacacaaccacgacgataagtctgtggaaacaattttggtggagtctggaattgtatgc
ccaggactaccacttatcattcctgatggttacaagctgatagacaattctctcattctt
cttgagtgttttgttaggagctcaccagccagttttgagaagaaatttatagaggacact
aacaaattggcatgcatcagggaagaccttgctgttgcgggtgtcacattagttccaata
gtagatggtcgttgtgattatgataatagttttatgccagagtgggcaaacttcaaattt
agagaccttttattcaaacttttggagtattctaaccaaaatgagaaagtctttgaagag
tctgaatattttagactctgtgagtccctgaagactactatcgacaagcgctccggtatg
gactctatgaaaattctgaaagatgcgaggtcaactcacaatgatgaaattatgaggatg
tgccacgaaggcatcaaccccaacatgagctgtgatgatgtggtttttggaataaactct
cttttcagcaggtttagaagagatttagaaagtgggaaattaaagagaaactttcagaaa
gtaaaccctgaaggcttgatcaaggaattctctgagctctatgaaaaccttgctgatagt
gatgatatcttaacattaagcagggaggcagtcgaatcctgtcctttgatgagattcata
actgcagagacccatgggcacgaaaggggaagtgagactagcactgaatatgagaggctc
ctctctatgttaaacaaagtcaagagtttgaaactgttgaatactagaaggagacagttg
ttaaatctggatgttttgtgtctttcctcattgataaaacagtcgaaattcaaagggtta
aaaaatgataaacactgggtgggttgttgctatagtagtgtgaatgataggctggtaagc
tttcacagcactaaagaggagttcattagacttttgaggaatagaaaaaagtcaaaggtg
tttagaaaggtgtcttttgaggaattgtttagggcgtctattagtgagttcattgcaaaa
attcaaaaatgcctgttagtggtgggactgagtttcgagcattacggactgtctgaacac
cttgagcaagaatgccacataccattcactgaatttgagaactttatgaaaattggagct
cacccgataatgtattatacgaagtttgaagattacaatttccaacccagcacagagcag
ctgaagaacatacagagcctgagaagattatcatctgtttgtctggccttaacaaacagt
atgaaaactagctcagttgctagactaaggcaaaatcaaatagggtctgtgagatatcaa
gtggtagaatgcaaagaagtgttttgccaagtaataaaactggactctgaagaataccac
ctattataccagaagactggagaatcttcaaggtgctactccatacaaggcccggatggt
catttaatttccttctatgcagatcctaaaaggttctttttaccaattttttcagatgag
gtcttatacaatatgatagacatcatgatttcatggattagatcatgtcctgatttgaaa
gactgtctcaccgacattgaggttgcactgaggaccctattgttgctaatgctcaccaac
ccaacaaagagaaatcaaaagcaggtacagagtgtcagatatttggtgatggcaatagtg
tcagatttttcatctacatcattaatggataagttgagggaggatctgatcacacctgct
gagaaggtggtgtataagctgcttagattcctaataaaaactatttttggtactggtgag
aaggtgttgttgagtgcaaaatttaaatttatgttgaatgtgtcatacctgtgtcatttg
atcacaaaggagacccctgacaggctaacagatcagataaaatgttttgaaaagttcttt
gagcccaaaagtcaatttggtttttttgtcaaccccaaggaagcaatcactcctgaggaa
gaatgtgtgttctatgagcaaatgaagagattcactagtaaagaaattgactgtcagcat
acaactccaggtgttaatctggaagcctttagcctaatggtgtcttcatttaacaacggc
actttaattttcaaaggagagaagaagctaaacagcctagatcccatgactaactctgga
tgtgcgacagcattagatcttgctagtaacaaaagtgtggtggttaataagcatctaaat
ggagaacgacttctggaatatgactttaacaaattgcttgttagtgctgtgagtcaaatt
acggagagtttcgtaagaaaacaaaagtataagttgagccactcagactatgaatataaa
gtttccaagttagtctctagattggtcatcggttccaagggagaagagacagggagatcg
gaagacaacctggcagaaatatgttttgatggagaagaagagacaagcttcttcaaaagt
ctcgaagaaaaggtcaacaccacaatagcacggtacagaagaggtaggagggccaatgac
aaaggagatggagaaaaacttacaaatacaaaaggactacatcatttacagcttattcta
acagggaagatggctcacttaagaaaagttatcttgtcagaaatatctttccatttagta
gaagactttgacccatcatgtctaaccaatgatgacatgaaatttatctgtgaggctgtt
gagggttccacagagctgtcacctttgtatttcacctcagtcattaaagatcagtgtggc
ctcgatgagatggcaaaaaacctttgtagaaagttcttttctgagaatgattggttttct
tgcatgaagatgattctgttgcaaatgaatgcaaatgcgtactcagggaaatacaggcat
atgcaaaggcaaggcttgaatttcaaatttgactgggacaaactggaagaagacgtgaga
atcagtgagagggaaagtaattctgagtcccttagtaaagctctgtcgttgacaaaatgt
atgagtgctgctttgaaaaatctgtgcttctactcagaagaatcaccaacatcatacacc
tcagtaggtcctgactctggaaggctgaaatttgcactatcttataaagagcaggttggg
ggaaatagagaactctatattggagatttgaggacaaaaatgttcacaaggttaatagaa
gattattttgagtctttttcaagtttcttttcaggctcctgtttaaacaatgataaggaa
tttgaaaatgcaatcttgtcaatgactatcaatgtgcgggaagggttcttaaactatagt
atggatcacagcaaatggggaccaatgatgtgcccatttttgttcttaatgtttctacaa
aatctcaaactaggtgatgaccagtatgtgcgttccgggaaagatcatgttagcactttg
ttaacttggcacatgcataagcttgtcgaggtcccctttcctgttgtgaatgcaatgatg
aaatcatatgtcaagtcgaagctaaaacttctcaggggttcagaaacaactgttactgag
agaattttcagacaatattttgaaatggggatagtgccatcccatatatccagccttatt
gatatggggcagggaatcttgcataatgcttctgacttctatggtttgcttagcgagagg
ttcatcaactactgcattggtgttatctttggcgaaagaccagaggcttacacatcaagt
gatgatcagatcactttatttgataggaggctgagtgacctggttgtaagtgatccggag
gaagtccttgtcctgttggaattccaatctcatctgagcggcttgttaaacaaatttatc
agcccaaaaagtgtggctgggaggttcgctgcagaatttaaatctagattctatgtatgg
ggggaggaagtccctcttctcacaaagtttgtatctgcagcgctacacaatgtcaagtgt
aaagagccacatcaactttgtgaaacaatagatacaattgcagatcaagccatcgcaaat
ggcgtcccagtctccctagttaatagtatccaaaggagaacactggacctcctaaagtat
gccaatttccctttggatccatttctactgaataccaacactgatgtgaaagattggctg
gatggttctagaggttacagaatacaaagactcattgaggaactgtgtcctaatgaaaca
aaggttgtaagaaagcttgtaaggaaactgcatcataagctcaaaaatggtgaatttaat
gaagaatttttcttagacctatttaacagagataaaacggaggccattcttcaattggga
gacctcctcggtcttgaagaagatctgaatcagttagcagatgttaactggttgaatttg
aatgaaatgttcccattaaggatggttttaagacaaaaggtggtttatccatcagtgatg
actttccaagaggaaagaatcccatcattgatcaagacactccagaacaaactttgtagt
aaattcacaaggggtgcacagaagctgctgtcagaagcaatcaacaagtcagctttccag
agttgtatctcatctggctttataggcctttgcaaaactctaggaagcaggtgtgtgaga
aacaaaaatagggaaaatctgtatatcaaaaagctgcttgaggatctaaccacagatgat
catgtgacaagagtttgcaatcgggatggtataacgctgtacatttgtgacaaacagtct
catccagaagcccaccgtgatcatatatgccttttaaggcctcttctttgggactacatt
tgtatttcattgagcaactcttttgagttgggtgtttgggtcctagcagaaccgaccaaa
gggaagaataacagtgagaacctaactcttaagcacttaaacccatgtgattatgtagca
agaaagcctgagagctcaaggctactggaggacaaagtgaatttgaaccaagtgattcaa
tctgtgaggcggctatatcccaagatctttgaggatcagcttcttccatttatgtctgac
atgagctcaaaaaacatgaggtggagtcccagaattaaattccttgacctctgtgtttta
attgatattaactcagaatccttgtcactcatttctcatgttgttaagtggaaaagggat
gaacattacactgttctgttttctgaccttgccaattctcatcagcgatctgactccagt
ctggttgatgaatttgttgttagcacgagggatgtctgcaagaacttcttaaaacaggtg
tattttgaatcatttgttcgagaatttgttgcaacaaccaggacattaggcaatttttca
tggttccctcataaagaaatgatgccatctgaagatggtgctgaggcactgggccccttt
caatcatttgtctcaaaggtggtgaacaaaaatgtggagaggcctatgtttaggaatgat
ttgcagtttggttttgggtggttctcttaccgaatgggagatgttgtgtgtaatgctgcc
atgttgattaggcagggcctgacaaacccaaaggcatttaaatccttaaaggatctgtgg
gactacatgctcaactacacaaaaggggtattggagttttcaatttcagtggactttacg
cacaatcagaataatactgactgtttaaggaaattttcattgatattcttggttaggtgc
caattacagaatccaggtgtggctgaacttttatcatgctctcacctctttaagggtgag
atagatagaagaatgttggatgaatgcctccacttactgaggacagactctgtcttcaag
gtgaacgatggtgtctttgatatcagatctgaagagtttgaggattacatggaagatccc
ttgatacttggtgattctcttgagcttgagttgttgggctccaaaagaatactggatggg
attagatctattgactttgagagagttggacctgagtgggagcctgtgccactgactgta
aagatgggtgccctttttgaaggaagaaaccttgtccaaaatatcattgtgaagctggag
accaaggacatgaaagtctttctagcaggacttgagggctatgaaaagattagtgatgtc
cttgggaacctcttcctgcatcgattcagaactggtgaacatttgttgggttcagagata
agtgtaatcctccaggaactatgtatagacagatctattctgctgattccactgtcgctt
ttgccagactggttcgcctttaaggattgcagactttgttttagcaaatctaggagcact
ttgatgtatgaaatagtggggggcaggtttagactcaaggggaggtcctgcgacgattgg
ctaggcgggtcggtggccgaggacatcgactga
DBGET
integrated database retrieval system
