Vibrio gigantis: MID13_15045
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Entry
MID13_15045 CDS
T08202
Name
(GenBank) EAL domain-containing protein
KO
K20964
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
vgi
Vibrio gigantis
Pathway
vgi05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vgi00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
MID13_15045
Enzymes [BR:
vgi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
MID13_15045
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Ortholog
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GFIT
Motif
Pfam:
EAL
FIST
FIST_C
GGDEF
HVO_A0563_N
Motif
Other DBs
NCBI-ProteinID:
ULN64171
LinkDB
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Position
1:complement(3329271..3331769)
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AA seq
832 aa
AA seq
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MQTFTFLANTEALFRSQFDQREWCNSKQYLIQIFSAQSSDLARQIAGVALDRLNNATLIG
QSARHVICDNCLESACTLVIISEFNETHLTSAIQLFSGNPNQDSQDLAFQLGLTESTKTV
ISLCDQVEGRDYPIYSAFENLPYALPIAGGLCHENEFGRWVMHNDQTYQHACVAVALTNP
RLKVWSDAYSEWNPIGMKLRVTHAVGNRLYALNDKPAIEVFKHYLADGKDLPFSQLMSFP
LYRELGRKKGISTPLRINDDGSIEFDSPWHVGEEAQFCYNHPSLSAEKVRHGAEMLAMHQ
PESVIIYNCVSRLEFIDSKLELKPFEGIVNTCGAYCMGELHRNEGRQEILHHSLTYIAMR
ESDEIKEFRCEDFQCASTVSPLLNLVRNSVADLDSMNTQMETKLHQQARRLTESYRIDSR
TGLPNRIVLKERLNTILFSEHLLTLKLTNFHQVNEKYGYQVGDQLLLDLSNHFIERLQLR
VVKEPRVKVELFSIGVGEWAIIFNASVGSAKIKEGFVEFADDIEHINFEPYGLADIDYLS
VSLCGGFASRCDFLTDSGDEILLKAIEARRYGVRNNTHITNAKDIQVSEEDRKEQLGWLS
CVSRAILDQNIITYSQPIVESGTHEMIGQECLVRIMESDGTIVPPGKFLPIIADTHLYTR
LSRHMIKSTIGYMADKQSSFSINLSPQDLLSDKTLEVLETAISGMNDPTRLGLEVLESEQ
IKDYGRMIEVCDHFRSLGARIIVDDFGSGYSNIDEIIKLEPQIIKLDGSLIRNIDKDQKQ
RNIASQLVRLCQVFNAKTVAEFVHNQQVCEIAEQMGVDYLQGYYFGEPKRLF
NT seq
2499 nt
NT seq
+upstream
nt +downstream
nt
atgcagacatttacatttctcgcgaatactgaggcgttatttagatctcaatttgatcag
cgagaatggtgtaacagcaaacaataccttattcaaatcttctctgctcaatcttcagat
cttgctcgtcaaatcgcgggtgttgccctcgatcgtttaaacaatgcgacgctgatcggt
cagagtgctcgtcatgttatctgtgataattgccttgaaagcgcatgtaccttagtcatc
atcagtgagttcaacgaaacccatttaacctctgcgattcagcttttttctggaaatccc
aatcaagacagccaagatttagcttttcaattaggccttacagagagcaccaaaacggtc
atcagtttgtgcgatcaggttgaaggacgtgattaccctatctatagcgcttttgagaat
ttgccttatgcactgccgattgctggtggactgtgtcatgagaatgaatttggtcgttgg
gttatgcataacgatcaaacctaccagcacgcctgtgttgcggtggctctgaccaaccca
aggttgaaggtttggtcggatgcgtactctgagtggaacccaattgggatgaaactacga
gtaacacatgcagtcggaaaccgcttatatgcgttgaatgacaagcccgctatagaggtg
ttcaaacattaccttgcggatggtaaagaccttccctttagtcagctgatgagctttccg
ctttatcgagagcttggcagaaagaagggtatttcgacgcctttacgtattaatgatgac
ggcagtatcgagtttgatagcccttggcatgtcggtgaagaggctcagttttgttataac
catccctctttgagcgctgaaaaggtgcgtcacggtgccgagatgcttgccatgcatcag
cctgaatcggtgatcatctataactgtgtatctcgacttgagtttatcgatagtaaactt
gagctcaagccatttgaagggatagtgaatacatgcggtgcttactgcatgggtgagcta
caccgcaatgaaggccgccaagaaatactgcaccacagcctgacttatatcgccatgcgc
gagtctgacgagattaaagagtttcgttgtgaagattttcagtgtgcctcaacagtatcg
ccattgcttaaccttgtcagaaattcagttgctgatctcgacagtatgaatactcagatg
gagacaaaactccatcaacaagcgcgtcgcttaaccgaaagctaccgcattgactcgcgt
accggcttgccgaaccgtatcgtattgaaggagcgtctcaatacgattctttttagtgaa
catttactgactttaaagctgactaatttccatcaagttaacgagaagtatggctatcaa
gtgggcgatcagttattgcttgatctgtctaatcactttatcgagcggttgcagcttcgt
gtcgtgaaagagcctcgtgtaaaagtcgaattattcagtattggtgtcggagagtgggcg
attatttttaacgccagtgttggtagcgcgaaaataaaagaagggttcgttgagttcgca
gatgacatcgaacacataaattttgagccgtacggtttggctgatattgattacctgtca
gtttctctgtgtggcggttttgccagtcgttgcgacttcttaaccgacagtggtgacgag
atcttattgaaagcgatcgaagctcgacgctatggggtgcgtaacaatacccatatcacc
aatgcaaaagacattcaggtgagcgaagaggaccgcaaagagcaactcggttggttgagc
tgtgtgagtcgtgcgattttagatcagaacatcatcacctactcacagccgattgtggaa
tcgggtacgcatgaaatgattggccaagagtgcttggtcagaatcatggagtcggacggc
accattgtaccaccaggaaagttcttacctatcattgctgatacccatctctacacgcgc
cttagtcgccacatgattaagagcacaatcggctacatggcggataaacagagttcgttt
tctattaatctatcgccacaagacttgctgagcgataagacgcttgaggttcttgagact
gcgatcagtggtatgaacgaccctacgcgacttggcctagaagttttggagtcagaacag
attaaagattatggccgcatgattgaggtgtgtgaccatttccgatcgcttggagcgaga
attattgttgatgattttggctctggttattccaatatcgatgaaatcatcaagcttgag
ccgcagatcattaagctcgacgggagcttgattcgtaatatcgacaaagaccaaaaacaa
agaaatatcgcctctcagttggttcgcttatgccaagtgttcaacgctaaaacggtcgct
gaatttgtccataaccaacaggtttgtgagatagctgagcaaatgggtgtcgattatctg
cagggttattacttcggtgagcctaagcgactgttttag
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