Variibacter gotjawalensis: GJW-30_1_01580
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Entry
GJW-30_1_01580 CDS
T05320
Name
(GenBank) uracil DNA glycosylase superfamily protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
vgo
Variibacter gotjawalensis
Pathway
vgo03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
vgo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GJW-30_1_01580
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vgo03400
]
GJW-30_1_01580
Enzymes [BR:
vgo01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
GJW-30_1_01580
DNA repair and recombination proteins [BR:
vgo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
GJW-30_1_01580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
BAT59051
UniProt:
A0A0S3PT06
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All DBs
Position
complement(1629568..1630425)
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AA seq
285 aa
AA seq
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MSSIETDVRRALLSFYVEAGVHTLIGDEPIDRMAEPAVVEAPPELAPPPPAAAREDAPNR
YPTLQPKGTPAVAAPTAAVPETLAPEAAVMAARQAAGNAATLDELRTILSEFEGCALRGM
AKQTVFADGNPAAKLMFVGEAPGRDEDIEGLPFVGRSGKLLDRMLAAIGLDRQGAYIANI
IPWRPPGNRTPTPQESQVCLPFIRRQIELADPDVLVCLGGPSSQTLLGAREGIMRTRGKW
MTYNTGKRDIRAIATLHPAYLLRSPIAKRLAWRDFLAIKQELAKN
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
gtgagttccatcgaaaccgacgtccgccgtgcgcttctgagcttctatgtggaggccggc
gtacacacgcttatcggtgacgagccgatcgaccgcatggcggaacccgcggttgtggaa
gcgccaccggaacttgcgccaccgcctcccgcggctgcgcgcgaagacgcgccgaaccgg
tatccgacgctgcagcccaagggcacaccggctgttgcagcaccgacggcagcggtgccg
gaaacgctggcgccggaagccgccgtgatggcggcacggcaagcggccggcaatgccgcg
acgctcgacgaacttcgtacgattctgagcgagttcgaaggctgcgcgctgcgcggcatg
gcgaagcagaccgttttcgcggacggaaatccggccgcgaagctgatgttcgtcggcgaa
gcgcctggccgcgacgaggatatcgaagggctgccgttcgtcgggcgttccggcaaattg
ctcgaccgcatgctggcggcgatcgggctcgatcgtcagggcgcatatatcgcgaacatc
attccgtggcgtccgcccggcaaccgcacgccgacgccgcaggagagccaagtctgtctg
ccattcatccggcggcagatcgaacttgctgatccggatgtgctggtctgtctcggcggg
ccgtcatcgcagacgctgctcggcgcgcgcgaaggcatcatgcgcacgcgcggcaagtgg
atgacttacaacaccggcaagcgcgacattcgcgcgatcgcgacgctgcatccggcctat
ctgctgcgatcgccgatcgccaagcgcctcgcgtggcgagacttcctggcgatcaagcaa
gagctggcgaaaaactga
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