Variibacter gotjawalensis: GJW-30_1_03928
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Entry
GJW-30_1_03928 CDS
T05320
Symbol
fadD_3
Name
(GenBank) long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain acyl-CoA synthetase [EC:
6.2.1.3
]
Organism
vgo
Variibacter gotjawalensis
Pathway
vgo00061
Fatty acid biosynthesis
vgo00071
Fatty acid degradation
vgo01100
Metabolic pathways
vgo01212
Fatty acid metabolism
vgo02024
Quorum sensing
Module
vgo_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
vgo00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
GJW-30_1_03928 (fadD_3)
00071 Fatty acid degradation
GJW-30_1_03928 (fadD_3)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
GJW-30_1_03928 (fadD_3)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
vgo01004
]
GJW-30_1_03928 (fadD_3)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
vgo04147
]
GJW-30_1_03928 (fadD_3)
Enzymes [BR:
vgo01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
GJW-30_1_03928 (fadD_3)
Lipid biosynthesis proteins [BR:
vgo01004
]
Acyl-CoA synthetase
Long/very long chain acyl-CoA synthetase
GJW-30_1_03928 (fadD_3)
Exosome [BR:
vgo04147
]
Exosomal proteins
Exosomal proteins of breast milk
GJW-30_1_03928 (fadD_3)
Exosomal proteins of breast cancer cells
GJW-30_1_03928 (fadD_3)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
BAT61371
UniProt:
A0A0S3PZM4
LinkDB
All DBs
Position
3994545..3996206
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AA seq
553 aa
AA seq
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MNKFWLQNYPAGVPADVNVDEYRSVTALLEASYEKFKNDNAYVCMGRFLTYGQVDELSSS
LAAWLQSQGLKKGDRVAIMLPNLLQFPIAAAAILRAGLIIVNVNPMYTPRELEHQLKDSG
AETIFILDSFAPTLVEVIQRTPIKSVILSGAGDMLGAPDGTNDFGLPNATRFNLALAAGR
ELELQKPDIGPDDIAVLQYTGGTTGVSKGAVLLHKTLVANLLSSEAWTQPGLKRKTLTGQ
FNMVTAIPLYHVFAFIVCNLLSNRLGALSILIPNPRDLPGMIKTLQGFKINSFPAVNTLF
NSLAHDPEFAKLDFSELAVSTGGGMAVQEAVAKKWLEVTGCPISEGYGLTETSAGIASNP
TDTDAYTGTIGLPMPGVEIRIIDDNGNDVPAGERGEIAIRGPQVMAGYWQRPDETANVMT
PDGFFKSGDIGIMDERGYTRIVDRKKDMILVSGFNVYPNEIEGVVVSHPGVLECAAIGVP
DKNTGEAVKVFVVKHDPSLTEADLIEFCKEQLTGYKRPRTIEFRDDLPKSNVGKILRREL
RDEVLKTAAQAAE
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atgaataagttctggcttcaaaattatccggcgggcgttcccgccgacgtcaatgtagac
gagtatcgctcggtcactgctctgctcgaagcgagctacgaaaaattcaaaaacgacaac
gcctatgtctgtatgggccgctttctgacttacgggcaggtcgacgagctgtcgtcctcg
ctcgccgcatggctgcagagccaagggctgaagaaaggcgaccgcgttgcgatcatgctg
cccaatcttctgcagtttccaatcgcggcagccgcgatccttcgcgccggtctgatcatc
gtcaacgtcaacccgatgtacaccccgcgcgaactcgagcatcagctcaaggattcaggc
gccgagacgatcttcattctggattccttcgcgccgactttggtcgaggtgattcagcga
acgccgatcaagagcgtgatcctgtctggcgcaggcgacatgcttggcgctccggatggg
accaacgatttcggcctgccgaatgccacgcgcttcaacctcgcgctggccgccggccgc
gagctcgagctgcagaagcccgacatcgggcccgacgatatcgcggtgctgcaatatacc
ggcggcacgacgggcgtttcgaaaggcgcggtcctgctgcacaagacgttggtcgccaac
ctgctctcgtcggaagcgtggacgcagccgggcctcaagcgcaagacgctcaccggtcaa
tttaacatggtgacggcgatcccgctctaccacgtgttcgcattcatcgtgtgcaatctg
ctgtcgaaccgtctcggcgcattgagcatcctgattccgaacccgcgcgatcttcccgga
atgatcaagacgctgcagggcttcaagatcaactcgttcccggccgtgaacacgctgttc
aactcgctcgcgcacgatccggaatttgccaagctcgacttctctgaacttgccgtttcg
accggcggcggcatggccgtgcaggaagctgtcgcgaaaaagtggctggaggtcaccggc
tgcccgatctcggagggttacggcctcaccgaaacgtcggccggcatcgcgtcgaacccg
accgacaccgacgcttacaccggcacgatcgggctcccgatgccgggcgtcgagatccgc
atcatcgacgacaacggcaacgatgtgccggcgggcgagcgcggcgagatcgcgatccgc
ggcccgcaggtgatggccggctactggcagcgtccggacgaaaccgccaacgttatgacg
cccgacggcttcttcaaatctggcgatatcggcatcatggacgagcgcggctacacacgc
atcgtcgatcgcaagaaggatatgatcctcgtctcgggcttcaacgtgtacccgaacgag
atcgagggcgtcgtcgtcagccatccgggcgtgctcgaatgcgccgcgatcggcgtgccg
gacaagaacacgggcgaagccgtgaaggtgttcgtcgtgaagcacgatccgagcctgacg
gaagccgatctcatcgagttctgcaaagagcagctcaccggctacaagcggccgcgcacg
atcgaattccgcgacgatctgccgaagagcaatgtcggcaaaatcctccgccgcgaattg
cgcgacgaggtgctgaagacggcggcgcaggcggcagagtag
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