Vibrio harveyi: AL538_06240
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Entry
AL538_06240 CDS
T04380
Name
(GenBank) serine-type D-Ala-D-Ala carboxypeptidase
KO
K07259
serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:
3.4.16.4
3.4.21.-]
Organism
vhr
Vibrio harveyi
Pathway
vhr00550
Peptidoglycan biosynthesis
vhr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vhr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
AL538_06240
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
vhr01002
]
AL538_06240
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
vhr01011
]
AL538_06240
Enzymes [BR:
vhr01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
AL538_06240
Peptidases and inhibitors [BR:
vhr01002
]
Serine peptidases
Family S13: D-Ala-D-Ala peptidase C family
AL538_06240
Peptidoglycan biosynthesis and degradation proteins [BR:
vhr01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
AL538_06240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S13
Beta-lactamase2
Transpeptidase
Peptidase_S11
Motif
Other DBs
NCBI-ProteinID:
AMF97378
UniProt:
K5U5T6
LinkDB
All DBs
Position
1:1322432..1323856
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AA seq
474 aa
AA seq
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MRLRWSLLLLSSLTPLLSFAYPHQEVLPDGARISLVAEKLNGQSELKGIHPTEQYFPPAS
TLKVVTALAAKLELGNGFTFRTTLESSNSDAVFTFSGDPTLVTQDLKTMLTRAKKNGLNR
INGDLWLDNSAFTGYNRAVGWPWDILGVCYSAPASAVTLNENCVQASIYTQKNGTTRVYV
PEHQPINVATSAQTVSKSVQKSRHCDLELIANPNNQYQLTGCLVDRGDKPLPLKFAVQDP
EGYTSQKVEKLLKQVGISLKGKIRVGKAPEKSRKLLAVHKSKPLPQLLDEMLKRSDNLIA
DTLTKTLGAKFFVQPGSFTNGTEAIKQIIFSNTGIDIRNARLEDGSGLSRNNRISAKSMA
AILRYIWQHEQELNLIAIMPKSGESGTLQYRQSMRKAPIKGQLIAKSGSLYGTYNMAGYG
LDKNGKPNTLFVQFVSDYFPEKRDDNKPVVAPITRFEKLFYQDIVSFSQAMPKK
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgcgcttacgttggtcattgttactactctctagccttactccacttctctcttttgct
tatccccaccaagaggtgctgccagacggagcacgtatcagtttggttgctgaaaaactt
aatgggcaaagtgagctaaaaggcattcatcctactgagcagtatttccccccagcaagt
acattaaaagttgtcacagccttggctgcaaagcttgagctgggcaatggctttactttt
cgtacaacgttagaaagctccaactctgacgccgtctttactttttccggcgatcctaca
cttgtaacgcaagatcttaaaaccatgctgacacgagcgaagaaaaacggtctaaaccga
atcaatggggatctttggttagataacagcgcttttactggctacaaccgtgccgttgga
tggccatgggatattctaggcgtttgctatagcgcaccagcatctgctgtgacactgaat
gaaaattgcgttcaagcatcgatatacacacaaaaaaacggtacaactcgtgtttatgtt
cctgagcatcaaccaattaatgtcgccaccagtgctcaaaccgtgtcaaaaagcgtccag
aagagccgtcattgtgatttggagctcatcgctaacccaaacaaccaatatcaactaacc
ggctgcttagtagaccgtggcgataaaccactccccctcaagtttgcagtgcaagaccct
gaaggctacacaagccaaaaagtagagaaattgctcaagcaagtcggcatttcattaaaa
ggaaaaattcgagtcggcaaagcacctgaaaagtctcgcaagttattggcagtacacaaa
tcaaaaccattaccacagttgcttgatgagatgttaaaacgctcagataacttaattgcc
gatactcttactaaaacacttggcgctaagttctttgtacaacctggcagttttactaac
ggcactgaagcaatcaaacaaatcattttctccaatacggggatcgacattcgcaatgcc
cgattagaagatgggtcaggtttatcacgcaataaccgcatttcagcgaagtcgatggct
gctatcttgcgctacatttggcaacacgaacaagaactcaacttgatagcaattatgcca
aagtccggtgaatcaggaacattgcagtaccgccagagtatgcgtaaagctcctattaaa
ggacagttgattgcaaaaagcgggtccttgtacggcacgtacaatatggcggggtatggg
cttgataaaaacggcaaaccaaacacgctatttgttcagtttgtgtcggactatttccca
gaaaaaagggacgataacaagcctgtcgtcgccccgattactcgttttgagaaattgttt
taccaagacattgtgagttttagtcaggcaatgcctaagaagtag
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