Vibrio iocasae: SNR28_02585
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Entry
SNR28_02585 CDS
T11169
Name
(GenBank) GGDEF domain-containing protein
KO
K20956
diguanylate cyclase [EC:
2.7.7.65
]
Organism
vic Vibrio iocasae
Pathway
vic05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vic00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
SNR28_02585
Enzymes [BR:
vic01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.65 diguanylate cyclase
SNR28_02585
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
GGDEF
UFD1_N2
Motif
Other DBs
NCBI-ProteinID:
XHF82907
LinkDB
All DBs
Position
1:complement(566007..567104)
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AA seq
365 aa
AA seq
DB search
MMISKTSKKRIQLYSRPAKWLLSILALFILIANTLILNETNKLADLYSSQRNQATWFLFH
LSKEYRELMFEASHIGDEHSHLANVQLQYDLTWSRFDIMLSSRESDDFLSITNEKKILEE
MFLRFKALEPALLKIKENDPESISNFYIPAAQLHQEVSDYVHQIFRVSNPILLAKQEQAN
SLNTLQTILLSLFIICVILIWFIFNQELKHSRLLALTDPLTGLNNRFALFENTNKLSPTE
DNVTIFLLDLNGFKAINDKYGHVAGDRVLIEFARRLQSLTNYDCNSYRLGGDEFAILLNN
SNSEYSYSFKQEIYALFAAPFSYEKKNLKVTTSLGSANYPDDSQNIDELLMLADQKMYQM
KAGAA
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atgatgataagtaaaaccagtaagaaacgcatccaactctattccaggcctgcaaaatgg
ctactaagtattctcgcgttatttattctgatcgcaaacacgctaatactgaatgaaacc
aataaacttgctgatctgtactctagccagagaaatcaggctacctggtttctcttccat
ttgtctaaagagtatcgagagttgatgtttgaagcgagtcacattggcgatgagcactcg
cacctggccaacgttcagctccagtacgatcttacatggagtcgctttgatattatgctt
tcaagccgagaatctgacgactttttatctatcacaaacgaaaagaagatactggaagag
atgtttcttaggtttaaagcactggagcctgcactgctaaaaatcaaagaaaacgatcct
gaatcaataagtaacttctatatccctgcggctcaattacatcaggaagtttcagattac
gtacaccaaatattccgtgtgtctaacccaatacttctagcaaaacaggaacaagcaaat
agtctaaatacactacaaaccattctcctgagcttatttattatttgcgtaattcttatc
tggtttatttttaatcaggaactcaaacatagtcgcctattagcgctcactgacccttta
acaggattaaataatcgcttcgctttatttgaaaacaccaacaagctttcgcccacagaa
gataacgtcactattttcttgctcgacttaaatggctttaaagcgatcaacgacaaatat
gggcatgtcgctggagacagagtactgatcgagtttgctcgaaggttacaatccctcacc
aattatgactgtaatagctatcgcttaggcggtgatgagtttgccattctgttgaacaac
agcaacagtgagtacagctatagttttaaacaagagatttacgcgctgttcgcagctcca
tttagttatgaaaaaaagaatctaaaagtaacaaccagtctaggttctgccaactaccct
gatgatagccagaatattgatgagttattaatgcttgctgatcaaaaaatgtaccaaatg
aaagccggagcagcctaa
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