Vibrio sp. dhg: DBX26_20860
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Entry
DBX26_20860 CDS
T11094
Name
(GenBank) GGDEF domain-containing protein
KO
K20956
diguanylate cyclase [EC:
2.7.7.65
]
Organism
vid Vibrio sp. dhg
Pathway
vid05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vid00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
DBX26_20860
Enzymes [BR:
vid01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.65 diguanylate cyclase
DBX26_20860
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GFIT
Motif
Pfam:
GGDEF
GGDEF_GdpP
TetR_C_8
Motif
Other DBs
NCBI-ProteinID:
AXT73388
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All DBs
Position
2:1137938..1139035
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AA seq
365 aa
AA seq
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MKLSDTYPLKPQKWRYTTLSKLLLFVFATSLLLANVVLLQQTRALAQNFTNEQKQATWFL
FQLSKELSELVGEARRLDEDIQDINGAELQYELAWSRFDLLINSDDAYTFFSRNNIQQYF
LELFEQFKDLEPFLVEASNGDRQAAAQFYRSTQTLYLDLVDFVNQNFRLTSKVYEAQKGE
TQRLVQAQYMLFATFVLSTLSLIYFFYRESSFHRKLALSDPLTRLGNRSALFVTLRKNMQ
QKNTFYLCILDLNGFKKINDTHGHQAGDKVLRAIANRLKSMEINNFTTYRMGGDEFAIVV
QDKAISEEEIQRHINAVFDDPVLKTENDHQLSTSIGIARYPMDSDNIDFLINIADKRMYK
MKFQR
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atgaaattatcagatacctatccactcaagccccaaaagtggcgatacacaacactcagc
aaactgctgctgttcgtctttgctacctctttattgctcgcgaatgtcgtgctacttcaa
caaacgcgtgcattagcgcaaaactttactaacgagcaaaaacaagccacgtggtttttg
tttcagctgtctaaagagctgtcggaactggttggggaagcacgtcggcttgatgaagac
atacaggacataaatggcgcagagctacagtatgagctcgcctggagccgctttgactta
ctcatcaacagcgatgatgcgtacactttcttttctcgcaacaatattcagcagtatttt
ttagaactcttcgaacaattcaaagaccttgagccttttcttgtcgaggcgagcaacgga
gatcgtcaagcggcagcccagttttatcgctcaacccagacgctgtacttagacttagtg
gattttgtgaatcaaaacttccgactcaccagcaaagtatatgaagcacaaaaaggtgaa
acacagcgactggtacaagcgcaatatatgctgtttgcgacttttgtgttgtcgacactt
tctcttatttatttcttttaccgcgaatcaagtttccaccgaaaactagcactcagcgat
ccgctgacaaggctaggcaacagaagcgcgctgtttgtgacgctcagaaaaaacatgcaa
caaaaaaacacgttttatctctgtatcctggacttaaacgggtttaaaaaaattaatgat
actcacggacaccaagctggcgacaaagttttacgagctatcgctaaccggctaaagtcg
atggagatcaataattttaccacttaccgaatgggtggtgatgagtttgccatcgtcgtt
caggacaaagccatcagcgaagaagaaatacagcgtcatattaatgccgtgtttgatgac
ccggtactaaaaacagaaaacgatcatcaactttcgaccagtattggtatcgcgcggtat
ccgatggatagcgataatatcgacttccttatcaatatcgcagataaacgcatgtacaag
atgaaattccaaagatag
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