Virgibacillus salidurans: KFZ58_09170
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Entry
KFZ58_09170 CDS
T08697
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
vik
Virgibacillus salidurans
Pathway
vik03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vik00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KFZ58_09170 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vik03019
]
KFZ58_09170 (rny)
Messenger RNA biogenesis [BR:
vik03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
KFZ58_09170 (rny)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_PNO1_2nd
KH_KhpA-B
KH_2
KH_NusA_2nd
UPF0242
DUF2844
Exonuc_VII_L
Motif
Other DBs
NCBI-ProteinID:
UJL47998
LinkDB
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Position
1781214..1782779
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AA seq
521 aa
AA seq
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MENPLIISILLALILIVGIVVGYLIRKSIAEAKISSAENLAKQIVDEAHRNADTSKKEAL
LEAKDENHKLRQQTEEELRERRSEVQKQENRLMQKEENLDRKSETLDERELLLERKEQSL
TEKQQQIEEMESKVEAMKQEQQTELERISGYTTDQAKQIILERIEKEVTHESALMVKEAE
NRAKEDADKKAKDILSLALQRCAADHVAETTVSVVNLPNDEMKGRIIGREGRNIRTLETL
TGIDLIIDDTPEAVILSGFDPIRRETARMALEKLVQDGRIHPARIEEMVDKARREVDEYI
RETGEETTFEVGIHGLHPDLIKILGRLKYRTSYGQNVLKHSTEVAYLSGLLAAELGEDVT
LARRAGLLHDIGKAIDHEVEGSHVEIGKELGIKYKEHEVVINSIASHHGDEEATSVISVL
VAAADALSAARPGARSETLENYVKRLEKLEEISESFAGVEKSFAIQAGREIRIMVKPDEI
DDIESVSIARDIRKRIEGELDYPGHIKVTVIRETRSVEYAK
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatcccttaatcatctccattttgcttgctctaatcctaatcgtcggtattgtt
gttggttatctgattcgtaaatctattgcagaggctaaaatttccagtgcggaaaattta
gctaaacaaatagttgatgaggcacatcgaaacgcagatacctctaaaaaggaggcactt
cttgaggcgaaagatgaaaatcataaacttcgccagcagacagaagaagaattacgtgaa
agacgttcagaagtacaaaagcaagaaaatcgtctgatgcaaaaagaagaaaatctggac
agaaaaagtgaaacactggacgagcgtgagctcttgttagaaagaaaagaacagtcacta
acagaaaaacaacaacaaattgaagaaatggaaagcaaagtggaagctatgaaacaagag
cagcaaactgagcttgagcgcatttcaggatatacgacggaccaagcgaaacaaattatt
ttagagcggatcgaaaaagaagtgacacatgagtcagcattaatggtaaaggaagctgaa
aaccgtgcaaaagaagatgctgataaaaaagcaaaagacattctttcgctagccttacaa
cgttgtgctgcagaccacgtcgctgaaacaacagtatctgtagtaaaccttcctaacgat
gagatgaaaggacgtatcatcggacgtgaaggacgtaatatacgaaccctggaaacctta
actggtattgatttaattattgatgatacaccggaagcggtaattttatccggttttgat
ccgatacgacgggaaactgctcgtatggcattagaaaaactggtacaagatggcagaatt
cacccagcaagaattgaagaaatggtggataaagccagacgtgaggttgatgaatatata
cgggaaactggagaagaaacaacattcgaggttggaatacatggtctgcatccagactta
attaaaatactcggtcgtctaaaatatcgtacaagttatggccaaaatgtcctgaagcac
tcaacagaggttgcctacctctctggtttactggctgctgaattaggtgaagatgtaacg
ttagcaagaagagccggcttacttcatgacattggaaaagcaatagatcatgaagttgaa
ggtagccatgttgaaatcggtaaggaacttggaataaagtacaaagagcatgaggtagtt
attaattctatcgcttctcatcacggtgatgaagaagcaacttccgtcatttctgtattg
gtagctgccgcagacgcattatctgctgcacgccctggtgcaagaagtgaaacattggaa
aattatgttaaacgtttggaaaaacttgaagaaatttcggagtcctttgcaggggtagag
aaatcctttgcaatccaagccggaagagaaatccggatcatggttaaacctgatgaaatc
gatgatattgaatctgtaagtatcgctcgagatattcgaaagcggattgaaggagaactt
gattatccaggtcacattaaagtaaccgttattagagaaacacgatcagttgaatatgcg
aaataa
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