Virgibacillus phasianinus: CFK37_14690
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Entry
CFK37_14690 CDS
T04951
Name
(GenBank) ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
vil
Virgibacillus phasianinus
Pathway
vil03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vil00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CFK37_14690
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vil03019
]
CFK37_14690
03400 DNA repair and recombination proteins [BR:
vil03400
]
CFK37_14690
Enzymes [BR:
vil01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CFK37_14690
Messenger RNA biogenesis [BR:
vil03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CFK37_14690
DNA repair and recombination proteins [BR:
vil03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CFK37_14690
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
AAA_22
TniB
ParBc_2
Motif
Other DBs
NCBI-ProteinID:
ASK63313
UniProt:
A0A220U6G9
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All DBs
Position
3047454..3049010
Genome browser
AA seq
518 aa
AA seq
DB search
MNEIINNNELERELHDHFGYTSFQIGQREIINDVMQGKDVLGVLPTGMGKSMCFQLPAKL
LNGTTIVVSPLISLMIDQVKQLKASNFKRVVALNSFLSPKVRKKVYSLLNQYKLIYVSPE
LLQQRELMDYLKQVRVDLLVIDEAHCISQWGHDFRPDYLRLSEVVAELNNPSVLALSATA
TNEIQRDIKQVLQRPNMVDHIYPMDRENIVFSVEKLANDMEKNEKISRIFHRICVPTIIY
FSSRNATEQFTAFLLNEHPSLRVAFYHGGMENVDRISIQQQFMNDQLDVICCTSAFGMGI
NKKDIRFIIHYHFPTQLESFIQEVGRAGRDGNESVSLVLYSEHDYFLPARLIEHELPQKE
ALVYVFQQLYRMYKQSEQIPYKVELIETLFHLNDSQWRFLHYHLEKHGMIKGNQIIYQKE
NWKAAFHSINSIVYNRIQLKEQKLLQMTSWVETKSCLREQLYKGFQSTFKQPLHACCSNC
GFNLENWNPIPTVIEQRNQSWKEKLSALFSTEGAAKVP
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaaataataaataacaatgaattagaacgggaattacatgatcattttggttac
acatcgtttcaaattggccaaagggaaataataaatgatgttatgcagggtaaagatgta
ttaggagtacttcctacaggcatgggaaagtcaatgtgttttcagcttcctgccaaactt
ttaaacggaactacaattgtggtttcaccactaatttcacttatgattgatcaagtgaaa
cagcttaaagcatcaaactttaaaagagtagtagcattgaatagttttttaagtcctaaa
gtacggaagaaagtatatagcctgttaaatcaatataagttgatttatgtctcgccagaa
ctattgcagcaaagggagttaatggattatctaaaacaggtgagggtggatttgctagta
attgatgaagcgcattgcatatcccagtggggccatgatttccgtcctgattacttacgg
ttgagcgaagtagttgctgaattgaataatccatccgtattggccttgagtgcaactgct
acaaacgaaatacagcgggatattaagcaggtacttcaacgtccaaatatggttgatcac
atttacccaatggaccgtgagaatattgtcttctctgtagaaaagctggccaatgacatg
gaaaaaaatgaaaaaataagccgaatatttcatcgtatttgtgttcccactattatttat
ttttcaagtcgaaatgcaacggaacaatttacagcatttttattaaatgagcacccttct
ttgcgagtggctttctatcatggaggaatggaaaacgtagatcgtatttcgatacagcag
cagtttatgaacgatcaattagatgttatctgttgtacaagtgcttttgggatggggatc
aataaaaaagacatacggttcatcatccactatcattttccaacacaactggagtcattc
attcaagaagtcggcagggccgggcgggacgggaatgaaagtgtcagtctcgttctctat
tctgaacacgattattttcttccagcaaggttaatcgagcatgaactaccacaaaaagaa
gcgttagtctatgttttccaacaactttatagaatgtataaacaatcagaacaaattcca
tataaggtagaattgattgaaacactctttcatcttaatgatagtcaatggcgattttta
cactatcatcttgaaaagcatggtatgataaagggaaatcaaatcatttatcaaaaggaa
aattggaaggccgcttttcattcaatcaactcaattgtttataatcgtatccagttaaaa
gaacaaaagttacttcagatgacttcctgggtagaaacgaaaagttgtcttagggagcag
ctttataaaggatttcaatcaacatttaagcagccgctgcacgcttgctgcagcaattgt
ggatttaatctggaaaattggaatccaatcccaactgttattgaacagcgtaaccagtca
tggaaagaaaaactatcagctttattttcaaccgaaggggctgcaaaggtaccataa
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