Virgibacillus sp. MSP4-1: GWK91_15975
Help
Entry
GWK91_15975 CDS
T06398
Name
(GenBank) endonuclease
Organism
vim
Virgibacillus sp. MSP4-1
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
5_nucleotid_C
SNase
LTD
DUF5689
Metallophos
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
QHS24297
UniProt:
A0A6B9YIR3
LinkDB
All DBs
Position
3232618..3236823
Genome browser
AA seq
1401 aa
AA seq
DB search
MKKFVSNKLLNVLIVCTIVFTNFFTLFGNPVSAESGQADGLFISEYVEGSSYNKAVEIYN
GTGQAVDLSQYTLELYSNGNETPNQTLNLSGSLSAGDVYVVAHSSASAEILNVADETAGV
VNFNGNDAFTLTKNDTPIDILGTVGQDGDYAKDVTLVRTASITSGNTTYTETEWNSHAKD
TIEYLGSHSMDGDPSDPGDPGDPVDPGEPVSIEEARSLAVGTEVTVEGVVTADNSAIGGG
QLSTYIQDETAGINVFNFDATGYPVLEKGDRVQVTGTIDEYQGLLEVVPNNSDSVEVLSE
NQPLPAPQEITLADMQDSSIAEPLEGSRVQVNGYISSIPESPAGGGYNISLIDEEFNGTT
LRVMEDALDVSQLEEGTWYDITAILSQYHSYQLIPTEAADITVADEQPEPPSAAGEYTST
VEYVTDGDTIRLETPVLGSDRVRFVNIDTPETDMGSANGAHGENQDEHGEAAKTYLQSLL
QPGDEVTLKIGDEPTDNYGRLLAQVINKDGINTNLEMVREGYAATYFLWPFGENAQYDTY
QSAVKAAKDAGKGIWNPDNPLIELPFEYRAILEGGDFDKFVGHSDTKEYVQPTEFEQVPV
HKRIFFWSESDAIEAGYTAAGDSGGDPVNPGETVSVQLLGLNDLHGKIDQEYELDLDGDG
QMDGMFGRMDYVAGFFEEREQENPNTLKVHAGDMIGASSPVSALYQDEPTVEIMEEMGFD
VGTVGNHEFDEGTEELMRMVNGGDHPEGTENYDGMNFDVLCANCVGKNTGETILPPYAVK
EVAGQQIGFIGVTTQETPEMVMPDGIQNMDFTDEKEAIDQAVDELTSQGIESIVVLSHVP
GSQSGDTSATGAVADLARSIDDEVDMIFAAHNHQVVNGVVDDKLIVQAYEYGKAFADIDL
EIDTETGDIVDKQAEIVYTDQSKLEPDTEVASILDKYSTLIEEKMNEVLGYNAYDLTGDY
SNDGDHGLGNFLADGMKWAMDSDFAMMNGGGIRDDLLAGEVTWGDLFNIQPFGNVLMKFD
IKGKDLYPILNAQLSSQYGPDYSISGFHYTWNPETTEVVDITLPDGTPIDENKTYTLTVN
NYMGTSQGEKYRPIGELGQNPVMGPEDIEATVDFINHLNTTAENPLNYHPDGEGRITEGS
AIDYQNATMTEARDAAVGSGVILEGIVTYVDGMNYYVQDETGGIVVRSANLEAEAGDKIQ
AKGVTSEYYGLLQVVTEDAEVTETNAGEPEAVTVQAADVGEAVEGQLVELEYVTTQSANE
FNEYQAEDVSGEVVLADEENLLAEGQNYKSLIGVVTYSFGGYKVIPRKPEDVTKLFFVHE
DGAVEDAAETLVESSNLLGLDRVKELLKEQLTEVVETKGNTKQHIKSVVHHVSKSLSKIE
QGKGNRTVELRKIDRELNKLF
NT seq
4206 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaatttgtgtcgaacaagcttttaaatgtcctcattgtatgcaccattgtgttc
accaactttttcacattgttcggaaatccagtgagtgcggaaagtggacaagcggacggc
ttatttatttcagagtatgttgaagggtcatcctacaacaaagccgttgaaatttataac
gggacaggacaggctgtagatctctctcagtatacactggagctttacagcaatggaaat
gagacgccgaatcagaccttgaatttatcagggagcctgtctgcaggagatgtttatgtt
gttgctcattccagtgcatcagccgagattttaaacgtagcagatgaaacagcaggtgta
gttaattttaatggcaacgatgcgtttaccctgacgaaaaatgatactccaattgacatc
ttaggtaccgttggacaggatggtgattatgccaaagatgtcacccttgtacgaacagcc
tccattacatcaggaaacaccacatacacagaaacagaatggaactcccacgcaaaagac
acaattgaatatttaggcagtcactctatggacggggacccgtcagacccaggagaccca
ggtgatccggttgatccaggagaacctgtaagtattgaagaagcgcgaagcttagcagtt
ggcactgaagtaactgtagaaggcgtcgttacagccgataattcagccattggcggtggg
caactatcgacatacatacaggatgaaaccgctggaatcaatgtctttaattttgatgct
accggttaccccgtattggaaaaaggggaccgtgtgcaggtgacagggacgatcgatgaa
tatcagggactgcttgaagttgtgccaaacaacagtgattctgtagaagtattaagcgaa
aatcaaccgttgcctgcaccacaggaaattacactggcagatatgcaggatagttcaatc
gccgaacctttggaaggatcccgtgttcaggtgaatggctatatttcttccattcctgaa
agtcctgccggcgggggatacaatatttccttaattgatgaagaatttaatggaaccact
ttaagagtcatggaggatgcccttgatgtatcccagcttgaagaaggaacatggtatgac
attacggcgattttgagtcagtatcattcctaccagctcattccgacagaggccgcagat
attacagtagctgatgagcagccggagccgccatctgccgccggggaatatacctcaacc
gtggaatatgtgacagatggagataccattcgtcttgaaacccctgtattaggttcggac
cgggtgcgctttgtcaacatcgatacgccggaaaccgatatgggatcagcaaatggtgcg
catggtgaaaatcaggatgagcatggcgaggccgctaaaacctacctgcaatcactactg
caaccaggagatgaagtgaccttaaaaattggggatgagcctaccgataattatggccgt
cttttggctcaggtgatcaataaggatggtattaataccaatcttgagatggttcgggaa
ggctatgctgccacatactttctatggccatttggagaaaatgctcaatatgacacgtat
cagtcagccgtgaaagcagcaaaggatgcaggaaaaggtatctggaatccggataaccca
ttaattgagcttccttttgaataccgggcgattttagaggggggcgattttgataaattt
gtcggtcattcagataccaaagaatatgtgcagccaacagaatttgaacaggttccggtc
cataagcggatctttttctggagcgaaagtgatgcgatagaagccggctatactgctgca
ggcgacagcggcggagatccggtaaatcctggtgagaccgtttctgtacagctcttaggc
ttaaatgatttgcacggaaaaattgatcaggaatatgaactggacttagatggtgatggc
caaatggatggaatgtttggccggatggattatgtagcgggcttttttgaagagcgagag
caggaaaatccgaatacgttaaaagtacatgccggtgatatgatcggagcaagctcccct
gtgtctgcgctttatcaggatgagccaaccgtggaaattatggaggaaatgggctttgat
gttggtacggtcggcaaccacgagtttgacgaaggtacagaagagctcatgcgaatggtg
aatggcggagaccatcctgaaggaacagaaaactatgatggtatgaactttgatgtcctt
tgtgccaactgtgtcggtaaaaataccggtgaaaccatccttccgccatatgccgtgaaa
gaagtggccggacagcaaattggctttatcggtgtaaccactcaggaaacaccggaaatg
gtgatgccggatgggattcagaatatggactttacggacgagaaggaggcgattgatcag
gcagttgatgagttaacctctcagggtattgaatcgattgttgtactatctcacgttccc
ggcagccaatcaggtgatacatcagcaaccggtgcagtcgcagatttggccagatccatt
gacgatgaagtcgatatgatttttgctgctcataatcatcaggtcgtaaatggagtggtt
gatgacaaacttatcgtacaggcgtatgagtatggaaaagcatttgcggatatcgacctt
gaaattgacacggaaaccggcgatattgtcgacaagcaggcggaaattgtatataccgat
caaagcaagcttgagcctgatacggaagtcgcctcgattttagataagtattctactctt
attgaagaaaaaatgaatgaggttcttggttacaatgcctatgatctaaccggggattac
tccaacgacggagatcacgggttagggaattttcttgcagatggtatgaaatgggccatg
gatagcgattttgcaatgatgaacggtggcggaatccgtgatgatttattggccggcgaa
gtgacctggggtgatttgttcaacattcagccgtttgggaatgtcttaatgaaatttgac
attaaaggtaaggatctctatcctattctgaatgcacagctgtcttcccagtatggtccg
gattacagtatcagcggattccactatacatggaaccccgaaaccactgaggttgtggac
attacacttccggatggaacaccgattgatgaaaataaaacttatacattaacagtcaat
aattatatgggcacctcccagggagagaaataccgtcctattggcgagctcggacaaaat
ccggtcatgggcccggaagatattgaagctacggtagacttcatcaatcatttaaataca
acagcggaaaatcccctgaattatcatcctgatggggaaggcagaattacagaaggaagc
gccattgattatcagaatgctacaatgactgaagcccgtgatgcagctgttggcagtggt
gttattttggaaggtatcgtaacttatgtggacggaatgaattattacgttcaggatgaa
accggcggaattgtcgttcgttctgctaatttagaagcggaagcgggcgataaaatacag
gctaaaggggtaaccagtgagtattacggacttctgcaggttgtgacagaggatgcggaa
gtgaccgaaaccaatgctggtgaacctgaagctgtaaccgttcaggcagctgatgttggt
gaagctgttgaaggacagctggtagaactcgaatacgtgacaacccaatcggcaaatgaa
ttcaatgaatatcaggctgaagatgtttcaggcgaggttgtgctggcagatgaagagaat
ctattagcagaaggccagaactataagagtttaataggagttgtcacttatagtttcggg
gggtacaaagttattccgcgtaaaccggaagatgttacgaaacttttcttcgttcatgaa
gatggagctgtagaagatgctgctgaaactctggttgaatccagtaatctactggggctg
gacagagttaaagaattactaaaggaacagctgacagaagtcgtagaaacaaaaggaaat
acaaaacagcacattaaatcagtggtccatcatgtttccaagtctttgagtaaaatcgag
caaggaaaagggaacaggactgtggagcttagaaaaatcgatcgcgaattgaataagtta
ttttaa
DBGET
integrated database retrieval system